FFCP PHASE1:Mm9::chr2:31939170..31939271,-: Difference between revisions
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{{FFCP|EntrezGene=241303|HGNC=|MCL_coexpression_id=0|UniProt=A2ATN4,Q8C552|association_with_transcript=0bp_to_NM_175511,uc008jek.1_5end|description=CAGE_peak_1_at_Fam78a_5end|id=chr2:31939170..31939271,-|ontology_enrichment_celltype=CL:0002031!1.39e-09!25;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32|ontology_enrichment_celltype_v019_2=CL:0002031,5.31e-10,25;CL:0000988,6.03e-09,32;CL:0002032,6.03e-09,32;CL:0000037,6.03e-09,32;CL:0000837,6.03e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.85e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0003081!1.78e-13!88;UBERON:0002390!1.86e-13!45;UBERON:0003061!1.86e-13!45;UBERON:0004177!4.48e-09!29;UBERON:0005057!2.42e-08!51;UBERON:0001007!5.68e-08!128;UBERON:0001555!5.68e-08!128;UBERON:0007026!5.68e-08!128;UBERON:0004119!6.74e-08!130;UBERON:0000925!6.74e-08!130;UBERON:0006595!6.74e-08!130;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0001048!2.18e-07!147;UBERON:0005911!4.41e-07!69;UBERON:0000926!5.25e-07!193;UBERON:0004120!5.25e-07!193;UBERON:0006603!5.25e-07!193;UBERON:0002370!7.73e-07!23;UBERON:0000974!7.73e-07!23;UBERON:0004807!7.73e-07!23;UBERON:0005058!7.73e-07!23;UBERON:0003351!7.73e-07!23;UBERON:0009113!7.73e-07!23;UBERON:0003295!7.73e-07!23;UBERON:0009722!7.73e-07!23;UBERON:0005562!7.73e-07!23;UBERON:0007690!7.73e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.25e-16,48;UBERON:0002405,9.25e-16,48;UBERON:0002390,1.07e-14,45;UBERON:0003061,1.07e-14,45;UBERON:0003081,3.49e-14,87;UBERON:0001007,4.32e-10,116;UBERON:0001555,4.32e-10,116;UBERON:0007026,4.32e-10,116;UBERON:0004177,4.47e-10,29;UBERON:0005057,4.47e-10,29;UBERON:0004119,5.58e-10,118;UBERON:0000925,5.58e-10,118;UBERON:0006595,5.58e-10,118;UBERON:0004921,1.21e-09,114;UBERON:0001048,5.95e-09,134;UBERON:0000926,7.23e-09,120;UBERON:0004120,7.23e-09,120;UBERON:0006603,7.23e-09,120;UBERON:0000077,4.83e-08,35;UBERON:0005911,6.33e-08,69;UBERON:0002370,1.08e-07,23;UBERON:0000974,1.08e-07,23;UBERON:0004807,1.08e-07,23;UBERON:0005058,1.08e-07,23;UBERON:0003351,1.08e-07,23;UBERON:0009113,1.08e-07,23;UBERON:0003295,1.08e-07,23;UBERON:0009722,1.08e-07,23;UBERON:0005562,1.08e-07,23;UBERON:0007690,1.08e-07,23;UBERON:0006562,1.67e-07,24;UBERON:0001557,1.67e-07,24;UBERON:0001042,1.67e-07,24;UBERON:0008814,1.67e-07,24;UBERON:0009145,1.67e-07,24;UBERON:0003408,2.40e-07,24|phase1_expression=0.160148847104794,12.2141392673776,13.1949779422965,16.3330674105688,25.0447864973174,1.17515490338323,1.40167584357315,34.2176807120177,3.94208422024667,5.14941957908386,2.91070545983358,4.3874687447435,68.4802919724823,87.5078228214164,8.32774404539157,14.5782192520675,11.1929900500503,18.2968055907778,20.978508341678,11.4585205985468,60.976039038317,18.5674078745655,11.4927907221132,5.27974995218242,6.42345986988076,5.7423196411502,3.87685796543167,4.52489588640367,19.3823887845501,12.0974462284767,3.32595765982957,12.7006134691926,26.4477858661365,63.3926724061755,0.288851619751275,0.664938581433969,0.408338712524738,0.837063261473815,0.7813353445238,2.09409497589519,0,0.683045484958446,1.45653105909346,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,3.18786951509699,34.8173828165445,45.7087566833751,0,0.573066879877513,1.03134418455488,0,0,0,0,0,19.7977937801908,10.8775299882367,12.7886420690298,4.49400165777607,2.68952813725088,0.103689612308478,0.270011876663381,0.420649922702764,0,0.220868540951614,0.367472397644862,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.302904773332736,0.151143120213571,5.50742528533188,0.860423876981386,0,0,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0,13.0169622879728,32.1082975722493,4.15637989381509,0.867426633830679,0.913396434936424,0.922461989024234,0.452167921657868,1.17588707135705,0.879666139307728,0.494389935468748,1.59059292611903,19.4614321428972,5.3383060482645,9.27534377533653,11.6370060752453,5.59175283654366,0.292780797011547,0.41889341362691,19.1592791406444,3.23500836165985,2.99951365496704,3.17675567682662,0.149790639404823,2.28750301409313,0.125654352112864,0.869121600961382,0.767146371990992,0.20778804455956,0.486723789203273,1.01839363850316,7.0911973247753,0.252722758433675,2.10441855886474,1.04096354370163,0.459804208866946,1.0803727788321,1.35634336052144,0.340182495756639,0.384341160854549,0.562210347358373,5.17406741478031,0.431135985865684,0.378212160335639,1.05570674498369,3.28793598641362,1.11218899690239,2.78601733217733,1.02891068203972,0.796137067273973,2.1066395619397,3.86021860672073,5.11494298912067,18.8484453007307,16.1822981386956,12.064158117888,14.678173606283,10.4285042826124,8.94749254746794,13.0219009060228,10.4626626545851,7.00592054203017,14.3167069424728,6.56669856316381,9.80932595504854,12.8655988934292,14.7098577245004,7.1129401942997,0,0.205809224758569,35.3548097792664,14.8092317331585,0.426576501070468,0.928946687441754,1.54640953586512,1.21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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241303 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=A2ATN4,Q8C552 | |||
|association_with_transcript=0bp_to_NM_175511,uc008jek.1_5end | |||
|cluster_id=chr2:31939170..31939271,- | |||
|description=CAGE_peak_1_at_Fam78a_5end | |||
|id=chr2:31939170..31939271,- | |||
|ontology_enrichment_celltype=CL:0002031!1.39e-09!25;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.31e-10,25;CL:0000988,6.03e-09,32;CL:0002032,6.03e-09,32;CL:0000037,6.03e-09,32;CL:0000837,6.03e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.85e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0003081!1.78e-13!88;UBERON:0002390!1.86e-13!45;UBERON:0003061!1.86e-13!45;UBERON:0004177!4.48e-09!29;UBERON:0005057!2.42e-08!51;UBERON:0001007!5.68e-08!128;UBERON:0001555!5.68e-08!128;UBERON:0007026!5.68e-08!128;UBERON:0004119!6.74e-08!130;UBERON:0000925!6.74e-08!130;UBERON:0006595!6.74e-08!130;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0001048!2.18e-07!147;UBERON:0005911!4.41e-07!69;UBERON:0000926!5.25e-07!193;UBERON:0004120!5.25e-07!193;UBERON:0006603!5.25e-07!193;UBERON:0002370!7.73e-07!23;UBERON:0000974!7.73e-07!23;UBERON:0004807!7.73e-07!23;UBERON:0005058!7.73e-07!23;UBERON:0003351!7.73e-07!23;UBERON:0009113!7.73e-07!23;UBERON:0003295!7.73e-07!23;UBERON:0009722!7.73e-07!23;UBERON:0005562!7.73e-07!23;UBERON:0007690!7.73e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.25e-16,48;UBERON:0002405,9.25e-16,48;UBERON:0002390,1.07e-14,45;UBERON:0003061,1.07e-14,45;UBERON:0003081,3.49e-14,87;UBERON:0001007,4.32e-10,116;UBERON:0001555,4.32e-10,116;UBERON:0007026,4.32e-10,116;UBERON:0004177,4.47e-10,29;UBERON:0005057,4.47e-10,29;UBERON:0004119,5.58e-10,118;UBERON:0000925,5.58e-10,118;UBERON:0006595,5.58e-10,118;UBERON:0004921,1.21e-09,114;UBERON:0001048,5.95e-09,134;UBERON:0000926,7.23e-09,120;UBERON:0004120,7.23e-09,120;UBERON:0006603,7.23e-09,120;UBERON:0000077,4.83e-08,35;UBERON:0005911,6.33e-08,69;UBERON:0002370,1.08e-07,23;UBERON:0000974,1.08e-07,23;UBERON:0004807,1.08e-07,23;UBERON:0005058,1.08e-07,23;UBERON:0003351,1.08e-07,23;UBERON:0009113,1.08e-07,23;UBERON:0003295,1.08e-07,23;UBERON:0009722,1.08e-07,23;UBERON:0005562,1.08e-07,23;UBERON:0007690,1.08e-07,23;UBERON:0006562,1.67e-07,24;UBERON:0001557,1.67e-07,24;UBERON:0001042,1.67e-07,24;UBERON:0008814,1.67e-07,24;UBERON:0009145,1.67e-07,24;UBERON:0003408,2.40e-07,24 | |||
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| |||
|short_description=p1@Fam78a | |||
}} |
Latest revision as of 13:59, 26 September 2015
Short description: | p1@Fam78a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam78a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_175511, uc008jek.1_5end |
EntrezGene: | Fam78a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.31e-10 | 25 |
hematopoietic cell | 6.03e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.03e-09 | 32 |
hematopoietic stem cell | 6.03e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.03e-09 | 32 |