FFCP PHASE1:Mm9::chr7:29619496..29619524,+: Difference between revisions
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|id=chr7:29619496..29619524,+
|short_description=p2@Lgals4
|description=CAGE_peak_2_at_Lgals4_5end
|association_with_transcript=321bp_to_ENSMUST00000125155_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16855 | |EntrezGene=16855 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=321bp_to_ENSMUST00000125155_5end | |||
|cluster_id=chr7:29619496..29619524,+ | |||
|description=CAGE_peak_2_at_Lgals4_5end | |||
|id=chr7:29619496..29619524,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.01e-11!9;CL:0002251!1.01e-11!9;CL:0000239!1.50e-08!6;CL:0000677!1.50e-08!6;CL:0000212!1.50e-08!6;CL:0000584!1.50e-08!6;CL:0000075!4.04e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.52e-22,9;CL:0002251,7.52e-22,9;CL:0000239,1.62e-15,6;CL:0000677,1.62e-15,6;CL:0000584,1.62e-15,6;CL:0000075,3.46e-13,7;CL:0000066,1.17e-12,25;CL:0002076,2.16e-12,15;CL:0000682,4.77e-09,3;CL:0000223,7.47e-09,20;CL:0002250,6.51e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-21!43;UBERON:0005409!5.27e-21!59;UBERON:0000344!9.17e-19!15;UBERON:0001242!2.11e-16!13;UBERON:0000060!2.11e-16!13;UBERON:0001262!2.11e-16!13;UBERON:0004786!2.11e-16!13;UBERON:0003350!1.01e-11!9;UBERON:0004808!1.01e-11!9;UBERON:0001277!1.01e-11!9;UBERON:0004923!6.17e-11!24;UBERON:0000485!4.37e-09!11;UBERON:0001007!1.44e-08!128;UBERON:0001555!1.44e-08!128;UBERON:0007026!1.44e-08!128;UBERON:0004119!3.12e-08!130;UBERON:0000925!3.12e-08!130;UBERON:0006595!3.12e-08!130;UBERON:0004921!1.82e-07!126;UBERON:0004185!1.82e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.26e-60,31;UBERON:0005409,4.44e-43,47;UBERON:0000344,5.57e-36,15;UBERON:0001242,3.10e-31,13;UBERON:0001262,3.10e-31,13;UBERON:0004786,3.10e-31,13;UBERON:0003350,7.52e-22,9;UBERON:0004808,7.52e-22,9;UBERON:0001277,7.52e-22,9;UBERON:0004923,4.16e-21,24;UBERON:0000485,1.50e-17,11;UBERON:0001007,2.69e-17,116;UBERON:0001555,2.69e-17,116;UBERON:0007026,2.69e-17,116;UBERON:0004119,6.98e-17,118;UBERON:0000925,6.98e-17,118;UBERON:0006595,6.98e-17,118;UBERON:0004921,6.15e-15,114;UBERON:0002108,4.94e-11,4;UBERON:0000331,5.06e-09,3;UBERON:0002116,5.06e-09,3;UBERON:0001204,5.06e-09,3;UBERON:0001168,5.06e-09,3 | |||
|phase1_expression=0,20.9385244583617,29.5749505603198,19.0552453123303,20.5367249278002,18.4667199103079,17.9881733258555,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0.0992909512008853,0,15.1992801653736,23.8585652309857,35.6023817751313,31.4456257196125,28.4422027145374,36.104449696711,30.7476758307116,25.2772782147047,0,0,0,7.22129049378186,6.4831511689812,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,2.64335026387038,2.90895623329899,0,0,1.41754207454303,3.22693639397348,2.44615848229357,3.04361001780095,5.21981967698963,7.08205505313247,3.2673577144035,3.18330355265841,1.9496408711912,4.49409704327111,4.32276099749388,5.37681437786791,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0,1.09181281873089,0.134864346384821,0.495920734352016,0.26175594198403,6.86959358446502,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,20.9385244583617,29.5749505603198,19.0552453123303,20.5367249278002,18.4667199103079,17.9881733258555,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0.0992909512008853,0,15.1992801653736,23.8585652309857,35.6023817751313,31.4456257196125,28.4422027145374,36.104449696711,30.7476758307116,25.2772782147047,0,0,0,7.22129049378186,6.4831511689812,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,2.64335026387038,2.90895623329899,0,0,1.41754207454303,3.22693639397348,2.44615848229357,3.04361001780095,5.21981967698963,7.08205505313247,3.2673577144035,3.18330355265841,1.9496408711912,4.49409704327111,4.32276099749388,5.37681437786791,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0,1.09181281873089,0.134864346384821,0.495920734352016,0.26175594198403,6.86959358446502,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Lgals4 | |||
}} | }} |
Latest revision as of 13:25, 26 September 2015
Short description: | p2@Lgals4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lgals4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 321bp_to_ENSMUST00000125155_5end |
EntrezGene: | Lgals4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.52e-22 | 9 |
epithelial cell of alimentary canal | 7.52e-22 | 9 |
brush border epithelial cell | 1.62e-15 | 6 |
gut absorptive cell | 1.62e-15 | 6 |
enterocyte | 1.62e-15 | 6 |
columnar/cuboidal epithelial cell | 3.46e-13 | 7 |
epithelial cell | 1.17e-12 | 25 |
endo-epithelial cell | 2.16e-12 | 15 |
M cell of gut | 4.77e-09 | 3 |
endodermal cell | 7.47e-09 | 20 |
intestinal crypt stem cell | 6.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.26e-60 | 31 |
gastrointestinal system | 4.44e-43 | 47 |
mucosa | 5.57e-36 | 15 |
intestinal mucosa | 3.10e-31 | 13 |
wall of intestine | 3.10e-31 | 13 |
gastrointestinal system mucosa | 3.10e-31 | 13 |
epithelium of mucosa | 7.52e-22 | 9 |
gastrointestinal system epithelium | 7.52e-22 | 9 |
intestinal epithelium | 7.52e-22 | 9 |
organ component layer | 4.16e-21 | 24 |
simple columnar epithelium | 1.50e-17 | 11 |
digestive system | 2.69e-17 | 116 |
digestive tract | 2.69e-17 | 116 |
primitive gut | 2.69e-17 | 116 |
endoderm-derived structure | 6.98e-17 | 118 |
endoderm | 6.98e-17 | 118 |
presumptive endoderm | 6.98e-17 | 118 |
subdivision of digestive tract | 6.15e-15 | 114 |
small intestine | 4.94e-11 | 4 |
ileal mucosa | 5.06e-09 | 3 |
ileum | 5.06e-09 | 3 |
mucosa of small intestine | 5.06e-09 | 3 |
wall of small intestine | 5.06e-09 | 3 |