FFCP PHASE1:Mm9::chr1:146024389..146024411,-: Difference between revisions
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|id=chr1:146024389..146024411,-
|short_description=p1@Rgs13
|description=CAGE_peak_1_at_Rgs13_5end
|association_with_transcript=0bp_to_ENSMUST00000111941,uc007cxh.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=246709 | |EntrezGene=246709 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K443,A2AGZ8 | |UniProt=Q8K443,A2AGZ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000111941,uc007cxh.1_5end | |||
|cluster_id=chr1:146024389..146024411,- | |||
|description=CAGE_peak_1_at_Rgs13_5end | |||
|id=chr1:146024389..146024411,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.16e-10,3;CL:0002563,1.98e-09,9;CL:0002251,1.98e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.14e-09!59;UBERON:0000344!1.90e-07!15;UBERON:0004923!2.44e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.17e-17,15;UBERON:0000160,8.27e-16,31;UBERON:0005409,5.19e-15,47;UBERON:0004923,8.90e-13,24;UBERON:0001242,2.83e-12,13;UBERON:0001262,2.83e-12,13;UBERON:0004786,2.83e-12,13;UBERON:0002465,1.34e-11,3;UBERON:0003350,1.98e-09,9;UBERON:0004808,1.98e-09,9;UBERON:0001277,1.98e-09,9;UBERON:0001962,1.87e-08,2;UBERON:0001961,1.87e-08,2;UBERON:0001744,1.87e-08,2;UBERON:0000485,1.16e-07,11;UBERON:0001007,9.85e-07,116;UBERON:0001555,9.85e-07,116;UBERON:0007026,9.85e-07,116 | |||
|phase1_expression=0,0,0,0,0,19.6418748136911,13.315920513945,0,0,0,0,0,0,0,0,0.809901069559304,0,5.0473946457318,4.52477630898938,7.21462408056651,0,0,0,16.3192271249275,13.9939661450974,0.57423196411502,2.58457197695445,1.939241094173,0.570070258369122,0,4.8780712344167,0,0,0,4.33277429626912,5.81821258754723,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04686945442493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.17875767294343,0,0,0.304465478312141,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.2562274405697,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,10.2429822724977,1.58670339998127,0,0,0,0,0,0.190225626112559,3.79623249235609,0,0.251335208800269,0.198956472041151,0,0.898819408654221,1.94524244887225,4.38110801159608,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.422190474497091,0.238744688006273,0,1.7488850197791,0,0.512612642393558,0,0,0.188368457004691,0.546776910884101,1.60144721244566,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0.218362563746178,0,0.41326727862668,4.97336289769656,0.388844919875379,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.682205165178267,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0,0,0.347652977834566,0,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,19.6418748136911,13.315920513945,0,0,0,0,0,0,0,0,0.809901069559304,0,5.0473946457318,4.52477630898938,7.21462408056651,0,0,0,16.3192271249275,13.9939661450974,0.57423196411502,2.58457197695445,1.939241094173,0.570070258369122,0,4.8780712344167,0,0,0,4.33277429626912,5.81821258754723,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04686945442493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.17875767294343,0,0,0.304465478312141,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.2562274405697,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.268412837520744,0,0,10.2429822724977,1.58670339998127,0,0,0,0,0,0.190225626112559,3.79623249235609,0,0.251335208800269,0.198956472041151,0,0.898819408654221,1.94524244887225,4.38110801159608,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.422190474497091,0.238744688006273,0,1.7488850197791,0,0.512612642393558,0,0,0.188368457004691,0.546776910884101,1.60144721244566,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0.218362563746178,0,0.41326727862668,4.97336289769656,0.388844919875379,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.682205165178267,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0,0,0.347652977834566,0,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p1@Rgs13 | |||
}} | }} |
Latest revision as of 12:28, 26 September 2015
Short description: | p1@Rgs13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs13_5end |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | 0bp_to_ENSMUST00000111941, uc007cxh.1_5end |
EntrezGene: | Rgs13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.16e-10 | 3 |
intestinal epithelial cell | 1.98e-09 | 9 |
epithelial cell of alimentary canal | 1.98e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.17e-17 | 15 |
intestine | 8.27e-16 | 31 |
gastrointestinal system | 5.19e-15 | 47 |
organ component layer | 8.90e-13 | 24 |
intestinal mucosa | 2.83e-12 | 13 |
wall of intestine | 2.83e-12 | 13 |
gastrointestinal system mucosa | 2.83e-12 | 13 |
lymphoid system | 1.34e-11 | 3 |
epithelium of mucosa | 1.98e-09 | 9 |
gastrointestinal system epithelium | 1.98e-09 | 9 |
intestinal epithelium | 1.98e-09 | 9 |
gut-associated lymphoid tissue | 1.87e-08 | 2 |
mucosa-associated lymphoid tissue | 1.87e-08 | 2 |
lymphoid tissue | 1.87e-08 | 2 |
simple columnar epithelium | 1.16e-07 | 11 |
digestive system | 9.85e-07 | 116 |
digestive tract | 9.85e-07 | 116 |
primitive gut | 9.85e-07 | 116 |