Personal tools

FFCP PHASE1:Mm9::chr6:116287889..116287916,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:116287889..116287916,+
|DHSsupport=NA
|short_description=p6@March8
|DPIdataset=NA
|description=CAGE_peak_6_at_March8_5end
|association_with_transcript=-123bp_to_uc009djz.1,uc009dka.1_5end
|EntrezGene=71779
|EntrezGene=71779
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9DBD2
|UniProt=Q9DBD2
|association_with_transcript=-123bp_to_uc009djz.1,uc009dka.1_5end
|cluster_id=chr6:116287889..116287916,+
|description=CAGE_peak_6_at_March8_5end
|id=chr6:116287889..116287916,+
|ontology_enrichment_celltype=CL:0000117!2.63e-12!23;CL:0000337!2.63e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-32,23;CL:0000337,1.23e-32,23;CL:0000540,9.89e-22,33;CL:0000047,9.89e-22,33;CL:0000031,9.89e-22,33;CL:0000404,9.89e-22,33;CL:0000393,7.18e-18,39;CL:0000211,7.18e-18,39;CL:0002319,6.78e-16,43;CL:0000221,1.86e-15,44;CL:0000133,1.86e-15,44;CL:0002609,1.88e-13,6;CL:0002608,6.66e-11,3;CL:0000120,1.29e-10,3;CL:0002612,3.56e-10,3;CL:0002613,3.83e-10,3;CL:0002321,1.77e-08,70;CL:0002611,4.60e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.94e-19!52;UBERON:0005068!4.94e-19!52;UBERON:0006241!4.94e-19!52;UBERON:0007135!4.94e-19!52;UBERON:0002020!6.52e-16!34;UBERON:0003080!8.72e-16!40;UBERON:0002780!1.57e-15!39;UBERON:0001890!1.57e-15!39;UBERON:0006240!1.57e-15!39;UBERON:0000955!2.90e-15!50;UBERON:0006238!2.90e-15!50;UBERON:0002616!1.31e-14!49;UBERON:0000033!2.32e-14!63;UBERON:0001017!5.27e-14!73;UBERON:0005743!5.27e-14!73;UBERON:0003056!1.66e-13!49;UBERON:0000073!4.53e-13!75;UBERON:0001016!4.53e-13!75;UBERON:0002346!2.18e-12!71;UBERON:0003075!2.18e-12!71;UBERON:0007284!2.18e-12!71;UBERON:0004121!2.24e-12!102;UBERON:0000924!2.24e-12!102;UBERON:0006601!2.24e-12!102;UBERON:0002791!2.82e-12!29;UBERON:0003528!2.82e-12!29;UBERON:0001893!2.82e-12!29;UBERON:0000153!3.86e-12!94;UBERON:0007811!1.49e-11!86;UBERON:0000956!4.13e-09!21;UBERON:0001869!4.13e-09!21;UBERON:0000203!4.13e-09!21;UBERON:0002619!8.69e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.74e-33,34;UBERON:0001049,1.41e-22,52;UBERON:0005068,1.41e-22,52;UBERON:0006241,1.41e-22,52;UBERON:0007135,1.41e-22,52;UBERON:0001017,1.64e-22,73;UBERON:0001016,8.74e-22,75;UBERON:0003528,1.38e-21,29;UBERON:0002791,1.38e-21,29;UBERON:0001893,1.38e-21,29;UBERON:0000073,1.39e-21,54;UBERON:0002346,1.52e-17,64;UBERON:0003075,1.52e-17,64;UBERON:0007284,1.52e-17,64;UBERON:0002780,1.99e-17,39;UBERON:0001890,1.99e-17,39;UBERON:0006240,1.99e-17,39;UBERON:0003080,6.57e-17,40;UBERON:0004121,3.45e-16,95;UBERON:0000924,3.45e-16,95;UBERON:0006601,3.45e-16,95;UBERON:0000369,4.87e-16,5;UBERON:0002435,4.87e-16,5;UBERON:0000204,4.87e-16,5;UBERON:0010082,4.87e-16,5;UBERON:0000955,7.91e-16,47;UBERON:0006238,7.91e-16,47;UBERON:0001948,1.32e-15,5;UBERON:0002315,1.32e-15,5;UBERON:0010371,7.47e-15,73;UBERON:0002616,2.86e-14,46;UBERON:0000956,3.13e-13,21;UBERON:0001869,3.13e-13,21;UBERON:0000203,3.13e-13,21;UBERON:0003056,3.41e-13,49;UBERON:0002240,5.76e-13,6;UBERON:0005174,5.76e-13,6;UBERON:0001137,5.76e-13,6;UBERON:0010314,6.73e-11,92;UBERON:0002619,8.11e-11,17;UBERON:0002257,3.56e-10,3;UBERON:0002420,6.40e-10,8;UBERON:0007245,6.40e-10,8;UBERON:0010009,6.40e-10,8;UBERON:0010011,6.40e-10,8;UBERON:0000454,6.40e-10,8;UBERON:0001954,4.82e-08,7;UBERON:0003022,4.82e-08,7;UBERON:0002421,4.82e-08,7;UBERON:0000349,4.82e-08,7;UBERON:0002600,4.82e-08,7;UBERON:0000025,5.74e-08,114;UBERON:0004111,3.65e-07,122;UBERON:0002256,4.60e-07,2
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,1.5869729378161,5.07065122804943,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.841299845405528,1.14260393761521,2.20868540951614,3.30725157880376,2.68367318851062,2.75765635983006,0,0.127687338085188,0.46081959976873,2.76961204233407,2.56165402086747,1.04182674111352,0.558365998002762,0,0.15279824777681,1.76777151284201,1.56608848879013,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,1.37250180845588,7.16229807043327,0.521472960576829,0.767146371990992,0.20778804455956,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,3.80747065803352,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0.295220295959204,0,0.370191491765402,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.886701168211368,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,0,0.32977250588296,0.484393280087717,0.603129249281559,0.835606408021955,0.820704498725306,0.291480836629851,0.556275906031529,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0.948033361884535,0.202725215290164,0.102710957164827,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,0.685082519770642,0,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,1.90517476513229,0.347652977834566,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.177475806159338,0.476872379894642,0.726732083161643,0.282328141245992,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,1.74867404556562,0.467863216890817,0.429742108096597,0,0,0
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,1.5869729378161,5.07065122804943,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.841299845405528,1.14260393761521,2.20868540951614,3.30725157880376,2.68367318851062,2.75765635983006,0,0.127687338085188,0.46081959976873,2.76961204233407,2.56165402086747,1.04182674111352,0.558365998002762,0,0.15279824777681,1.76777151284201,1.56608848879013,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,1.37250180845588,7.16229807043327,0.521472960576829,0.767146371990992,0.20778804455956,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,3.80747065803352,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0.295220295959204,0,0.370191491765402,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.886701168211368,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,0,0.32977250588296,0.484393280087717,0.603129249281559,0.835606408021955,0.820704498725306,0.291480836629851,0.556275906031529,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0.948033361884535,0.202725215290164,0.102710957164827,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,0.685082519770642,0,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,1.90517476513229,0.347652977834566,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.177475806159338,0.476872379894642,0.726732083161643,0.282328141245992,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,1.74867404556562,0.467863216890817,0.429742108096597,0,0,0
|short_description=p6@March8
}}
}}

Latest revision as of 12:20, 26 September 2015

Short description:p6@March8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_March8_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -123bp_to_uc009djz.1, uc009dka.1_5end
EntrezGene:March8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@March8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.74e-3334
neural tube1.41e-2252
neural rod1.41e-2252
future spinal cord1.41e-2252
neural keel1.41e-2252
central nervous system1.64e-2273
nervous system8.74e-2275
brain grey matter1.38e-2129
regional part of telencephalon1.38e-2129
telencephalon1.38e-2129
regional part of nervous system1.39e-2154
neurectoderm1.52e-1764
neural plate1.52e-1764
presumptive neural plate1.52e-1764
regional part of forebrain1.99e-1739
forebrain1.99e-1739
future forebrain1.99e-1739
anterior neural tube6.57e-1740
ectoderm-derived structure3.45e-1695
ectoderm3.45e-1695
presumptive ectoderm3.45e-1695
corpus striatum4.87e-165
striatum4.87e-165
ventral part of telencephalon4.87e-165
future corpus striatum4.87e-165
brain7.91e-1647
future brain7.91e-1647
regional part of spinal cord1.32e-155
gray matter of spinal cord1.32e-155
ecto-epithelium7.47e-1573
regional part of brain2.86e-1446
cerebral cortex3.13e-1321
cerebral hemisphere3.13e-1321
pallium3.13e-1321
pre-chordal neural plate3.41e-1349
spinal cord5.76e-136
dorsal region element5.76e-136
dorsum5.76e-136
structure with developmental contribution from neural crest6.73e-1192
regional part of cerebral cortex8.11e-1117
ventral horn of spinal cord3.56e-103
basal ganglion6.40e-108
nuclear complex of neuraxis6.40e-108
aggregate regional part of brain6.40e-108
collection of basal ganglia6.40e-108
cerebral subcortex6.40e-108
Ammon's horn4.82e-087
lobe parts of cerebral cortex4.82e-087
hippocampal formation4.82e-087
limbic system4.82e-087
limbic lobe4.82e-087
tube5.74e-08114
anatomical conduit3.65e-07122
dorsal horn of spinal cord4.60e-072
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:116287889..116287916,%2B&oldid=4253208"