FFCP PHASE1:Mm9::chr10:84380448..84380461,+: Difference between revisions
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{{FFCP|EntrezGene=237422|HGNC=|MCL_coexpression_id=90|UniProt=Q80XE1|association_with_transcript=47bp_to_NM_001013441_5end|description=CAGE_peak_6_at_Ric8b_5end|id=chr10:84380448..84380461,+|ontology_enrichment_celltype=CL:0000117!6.32e-07!23;CL:0000337!6.32e-07!23|ontology_enrichment_celltype_v019_2=CL:0002612,9.77e-08,3;CL:0000117,8.51e-07,23;CL:0000337,8.51e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.84e-15!52;UBERON:0005068!2.84e-15!52;UBERON:0006241!2.84e-15!52;UBERON:0007135!2.84e-15!52;UBERON:0000033!1.75e-14!63;UBERON:0000955!2.48e-14!50;UBERON:0006238!2.48e-14!50;UBERON:0002616!9.98e-14!49;UBERON:0003056!5.99e-13!49;UBERON:0003080!1.16e-12!40;UBERON:0002346!3.50e-12!71;UBERON:0003075!3.50e-12!71;UBERON:0007284!3.50e-12!71;UBERON:0002780!4.56e-12!39;UBERON:0001890!4.56e-12!39;UBERON:0006240!4.56e-12!39;UBERON:0001017!5.22e-12!73;UBERON:0005743!5.22e-12!73;UBERON:0007811!3.56e-11!86;UBERON:0000073!4.42e-11!75;UBERON:0001016!4.42e-11!75;UBERON:0000153!9.24e-11!94;UBERON:0002020!2.36e-09!34;UBERON:0004121!2.68e-09!102;UBERON:0000924!2.68e-09!102;UBERON:0006601!2.68e-09!102;UBERON:0002791!5.00e-07!29;UBERON:0003528!5.00e-07!29;UBERON:0001893!5.00e-07!29;UBERON:0001894!7.11e-07!10;UBERON:0006222!7.11e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.13e-20,54;UBERON:0003080,2.33e-19,40;UBERON:0001049,3.55e-19,52;UBERON:0005068,3.55e-19,52;UBERON:0006241,3.55e-19,52;UBERON:0007135,3.55e-19,52;UBERON:0003056,6.34e-19,49;UBERON:0002346,4.36e-18,64;UBERON:0003075,4.36e-18,64;UBERON:0007284,4.36e-18,64;UBERON:0002780,8.93e-18,39;UBERON:0001890,8.93e-18,39;UBERON:0006240,8.93e-18,39;UBERON:0000955,1.02e-17,47;UBERON:0006238,1.02e-17,47;UBERON:0001017,2.08e-16,73;UBERON:0002616,2.98e-16,46;UBERON:0002020,5.98e-16,34;UBERON:0001016,8.05e-16,75;UBERON:0010371,3.50e-15,73;UBERON:0004121,6.80e-14,95;UBERON:0000924,6.80e-14,95;UBERON:0006601,6.80e-14,95;UBERON:0003528,1.32e-12,29;UBERON:0002791,1.32e-12,29;UBERON:0001893,1.32e-12,29;UBERON:0002420,5.38e-11,8;UBERON:0007245,5.38e-11,8;UBERON:0010009,5.38e-11,8;UBERON:0010011,5.38e-11,8;UBERON:0000454,5.38e-11,8;UBERON:0010314,6.35e-11,92;UBERON:0002021,4.18e-09,10;UBERON:0000411,4.18e-09,10;UBERON:0001950,4.18e-09,10;UBERON:0000369,2.10e-08,5;UBERON:0002435,2.10e-08,5;UBERON:0000204,2.10e-08,5;UBERON:0010082,2.10e-08,5;UBERON:0002257,9.77e-08,3|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0.903863264091034,2.67498572088167,3.7450324211519,0,0.0797721589953364,0.342401459862411,0.0874204024189974,0,0,0,0.157731082679119,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0,0,0.194429899074283,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0.61245399607477,0.479227355091182,0,1.10115880999389,0.510749352340751,0.614426133024974,1.31886287730194,1.00636407962651,0.52091337055676,1.3959149950069,2.25105044012672,0.61119299110724,1.17851434189467,1.85083185038834,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,1.49790639404823,26.992535566299,2.76439574648302,3.47648640384553,3.06858548796397,2.0778804455956,7.46309810111685,0.101839363850316,0.124406970610093,0.252722758433675,1.47309299120532,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,8.01980449290949,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.841159794256509,0.308713837137853,0,0,0.639864751605702,0.696710015581316,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.703270119553219,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,3.06395645178409,0.540183282093931,1.03486947026204,0.643011105094777,1.41872186913819,0.891844088010353,0.658196082408484,0.913394847343798,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.448549638131936,0.66183396182839,0,0.258319646955462,0,0.352071715937262,0.13020438484395,0.734015410979976,0,0,0,0,0,0.25984164595559,0.179026695667481,0.39736270956253,0.360586348559907,0,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0,0,0,0,0,0,0,1.84130094602871,0,2.23409137046794,2.74033007908257,3.0215755895588,0.675022500231806,0.900642406448441,2.26571204492102,2.07104124700728,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0.44449345560323,1.23621034343337,0.64183841918363,1.01078884705519,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.229741875822453,0,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,0,0.887379030796687,0.715308569841963,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0,0.271608227691724,1.68342681497322,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.749431733813838,0.467863216890817,0,0.382576664137687,0,0.231867835620421|short_description=p6@Ric8b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237422 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XE1 | |||
|association_with_transcript=47bp_to_NM_001013441_5end | |||
|cluster_id=chr10:84380448..84380461,+ | |||
|description=CAGE_peak_6_at_Ric8b_5end | |||
|id=chr10:84380448..84380461,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.32e-07!23;CL:0000337!6.32e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,9.77e-08,3;CL:0000117,8.51e-07,23;CL:0000337,8.51e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.84e-15!52;UBERON:0005068!2.84e-15!52;UBERON:0006241!2.84e-15!52;UBERON:0007135!2.84e-15!52;UBERON:0000033!1.75e-14!63;UBERON:0000955!2.48e-14!50;UBERON:0006238!2.48e-14!50;UBERON:0002616!9.98e-14!49;UBERON:0003056!5.99e-13!49;UBERON:0003080!1.16e-12!40;UBERON:0002346!3.50e-12!71;UBERON:0003075!3.50e-12!71;UBERON:0007284!3.50e-12!71;UBERON:0002780!4.56e-12!39;UBERON:0001890!4.56e-12!39;UBERON:0006240!4.56e-12!39;UBERON:0001017!5.22e-12!73;UBERON:0005743!5.22e-12!73;UBERON:0007811!3.56e-11!86;UBERON:0000073!4.42e-11!75;UBERON:0001016!4.42e-11!75;UBERON:0000153!9.24e-11!94;UBERON:0002020!2.36e-09!34;UBERON:0004121!2.68e-09!102;UBERON:0000924!2.68e-09!102;UBERON:0006601!2.68e-09!102;UBERON:0002791!5.00e-07!29;UBERON:0003528!5.00e-07!29;UBERON:0001893!5.00e-07!29;UBERON:0001894!7.11e-07!10;UBERON:0006222!7.11e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.13e-20,54;UBERON:0003080,2.33e-19,40;UBERON:0001049,3.55e-19,52;UBERON:0005068,3.55e-19,52;UBERON:0006241,3.55e-19,52;UBERON:0007135,3.55e-19,52;UBERON:0003056,6.34e-19,49;UBERON:0002346,4.36e-18,64;UBERON:0003075,4.36e-18,64;UBERON:0007284,4.36e-18,64;UBERON:0002780,8.93e-18,39;UBERON:0001890,8.93e-18,39;UBERON:0006240,8.93e-18,39;UBERON:0000955,1.02e-17,47;UBERON:0006238,1.02e-17,47;UBERON:0001017,2.08e-16,73;UBERON:0002616,2.98e-16,46;UBERON:0002020,5.98e-16,34;UBERON:0001016,8.05e-16,75;UBERON:0010371,3.50e-15,73;UBERON:0004121,6.80e-14,95;UBERON:0000924,6.80e-14,95;UBERON:0006601,6.80e-14,95;UBERON:0003528,1.32e-12,29;UBERON:0002791,1.32e-12,29;UBERON:0001893,1.32e-12,29;UBERON:0002420,5.38e-11,8;UBERON:0007245,5.38e-11,8;UBERON:0010009,5.38e-11,8;UBERON:0010011,5.38e-11,8;UBERON:0000454,5.38e-11,8;UBERON:0010314,6.35e-11,92;UBERON:0002021,4.18e-09,10;UBERON:0000411,4.18e-09,10;UBERON:0001950,4.18e-09,10;UBERON:0000369,2.10e-08,5;UBERON:0002435,2.10e-08,5;UBERON:0000204,2.10e-08,5;UBERON:0010082,2.10e-08,5;UBERON:0002257,9.77e-08,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0.903863264091034,2.67498572088167,3.7450324211519,0,0.0797721589953364,0.342401459862411,0.0874204024189974,0,0,0,0.157731082679119,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0,0,0.194429899074283,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0.61245399607477,0.479227355091182,0,1.10115880999389,0.510749352340751,0.614426133024974,1.31886287730194,1.00636407962651,0.52091337055676,1.3959149950069,2.25105044012672,0.61119299110724,1.17851434189467,1.85083185038834,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,1.49790639404823,26.992535566299,2.76439574648302,3.47648640384553,3.06858548796397,2.0778804455956,7.46309810111685,0.101839363850316,0.124406970610093,0.252722758433675,1.47309299120532,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,8.01980449290949,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.841159794256509,0.308713837137853,0,0,0.639864751605702,0.696710015581316,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.703270119553219,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,3.06395645178409,0.540183282093931,1.03486947026204,0.643011105094777,1.41872186913819,0.891844088010353,0.658196082408484,0.913394847343798,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.448549638131936,0.66183396182839,0,0.258319646955462,0,0.352071715937262,0.13020438484395,0.734015410979976,0,0,0,0,0,0.25984164595559,0.179026695667481,0.39736270956253,0.360586348559907,0,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0,0,0,0,0,0,0,1.84130094602871,0,2.23409137046794,2.74033007908257,3.0215755895588,0.675022500231806,0.900642406448441,2.26571204492102,2.07104124700728,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0.44449345560323,1.23621034343337,0.64183841918363,1.01078884705519,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.229741875822453,0,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,0,0.887379030796687,0.715308569841963,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0,0.271608227691724,1.68342681497322,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.749431733813838,0.467863216890817,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@Ric8b | |||
}} |
Latest revision as of 12:14, 26 September 2015
Short description: | p6@Ric8b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ric8b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 47bp_to_NM_001013441_5end |
EntrezGene: | Ric8b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 9.77e-08 | 3 |
CNS neuron (sensu Vertebrata) | 8.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.51e-07 | 23 |