FFCP PHASE1:Mm9::chr6:115542528..115542547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70291 | |EntrezGene=70291 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=D3YX48 | |UniProt=D3YX48 | ||
|association_with_transcript=19bp_to_ENSMUST00000088962_5end | |association_with_transcript=19bp_to_ENSMUST00000088962_5end | ||
|cluster_id=chr6:115542528..115542547,- | |||
|description=CAGE_peak_3_at_2510049J12Rik_5end | |description=CAGE_peak_3_at_2510049J12Rik_5end | ||
|id=chr6:115542528..115542547,- | |id=chr6:115542528..115542547,- | ||
|ontology_enrichment_celltype=CL:0000066!1.13e-08!25;CL:0002563!9.38e-08!9;CL:0002251!9.38e-08!9 | |ontology_enrichment_celltype=CL:0000066!1.13e-08!25;CL:0002563!9.38e-08!9;CL:0002251!9.38e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.48e-16,25;CL:0002563,4.89e-13,9;CL:0002251,4.89e-13,9;CL:0002076,3.80e-12,15;CL:0000075,6.02e-11,7;CL:0000223,7.76e-10,20;CL:0000239,8.06e-10,6;CL:0000677,8.06e-10,6;CL:0000584,8.06e-10,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.25e-25!59;UBERON:0000160!2.62e-24!43;UBERON:0001007!3.34e-18!128;UBERON:0001555!3.34e-18!128;UBERON:0007026!3.34e-18!128;UBERON:0004119!4.58e-18!130;UBERON:0000925!4.58e-18!130;UBERON:0006595!4.58e-18!130;UBERON:0004921!7.20e-17!126;UBERON:0004185!7.20e-17!126;UBERON:0000344!8.40e-13!15;UBERON:0001242!3.15e-11!13;UBERON:0000060!3.15e-11!13;UBERON:0001262!3.15e-11!13;UBERON:0004786!3.15e-11!13;UBERON:0000485!4.26e-09!11;UBERON:0004923!7.36e-08!24;UBERON:0003350!9.38e-08!9;UBERON:0004808!9.38e-08!9;UBERON:0001277!9.38e-08!9 | |ontology_enrichment_uberon=UBERON:0005409!1.25e-25!59;UBERON:0000160!2.62e-24!43;UBERON:0001007!3.34e-18!128;UBERON:0001555!3.34e-18!128;UBERON:0007026!3.34e-18!128;UBERON:0004119!4.58e-18!130;UBERON:0000925!4.58e-18!130;UBERON:0006595!4.58e-18!130;UBERON:0004921!7.20e-17!126;UBERON:0004185!7.20e-17!126;UBERON:0000344!8.40e-13!15;UBERON:0001242!3.15e-11!13;UBERON:0000060!3.15e-11!13;UBERON:0001262!3.15e-11!13;UBERON:0004786!3.15e-11!13;UBERON:0000485!4.26e-09!11;UBERON:0004923!7.36e-08!24;UBERON:0003350!9.38e-08!9;UBERON:0004808!9.38e-08!9;UBERON:0001277!9.38e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.28e-41,31;UBERON:0005409,3.55e-40,47;UBERON:0000344,2.17e-22,15;UBERON:0001242,1.82e-19,13;UBERON:0001262,1.82e-19,13;UBERON:0004786,1.82e-19,13;UBERON:0001007,2.79e-19,116;UBERON:0001555,2.79e-19,116;UBERON:0007026,2.79e-19,116;UBERON:0004119,9.72e-19,118;UBERON:0000925,9.72e-19,118;UBERON:0006595,9.72e-19,118;UBERON:0004921,2.42e-17,114;UBERON:0000485,1.61e-15,11;UBERON:0003350,4.89e-13,9;UBERON:0004808,4.89e-13,9;UBERON:0001277,4.89e-13,9;UBERON:0004923,2.52e-12,24;UBERON:0002108,1.66e-07,4 | |||
|phase1_expression=9.28863313207805,16.0528687514106,20.0199665331396,6.65421264875026,7.01254021924886,9.40123922706583,11.9142446703718,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,9.91953021319121,12.6175104586944,20.0981187440257,16.7997178502039,20.0388246397877,20.332505881832,14.617747526076,28.1597748532237,0,0,0,2.59966457776147,3.32469290716985,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,2.03991400112325,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,1.73192832808971,2.02687892380079,2.52762222507392,2.39786147410026,0,0,0,0,0.230615497256059,0,0,0,0.988779870937496,0,0,0,0,0,11.1835056730873,0,0,15.8383374229327,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6327666559585,24.8583532663732,0.426576501070468,1.16118335930219,2.44848176511977,3.83198696784351,6.22658522765637,7.03834816616469,12.3377556001573,7.08205505313247,8.29406189040889,8.55512829776949,6.82374304916921,10.7858329038507,11.0230405436094,10.3553462092271,0.758671603812327,0.114248512609729,0,0.814605311381257,0.581857461502877,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0.123397163921801,0.592905254174298,0,0.786235980452812,0.224862112384854,0.405720242777006,1.20588579876208,0.763877555344259,1.72617682470486,0.162135226775035,1.92192989231657,0,0.744281895337007,0.936113019343682,0.252578877947112,0.896987067609561,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,2.45186603682668,1.47650946440386,1.84461088766356,1.55056975900933,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,0,0.422190474497091,1.07435109602823,1.31312719796049,6.99554007911642,0,0,0,0.185194527369712,0,0,0,0,0,0,9.54670618015114,0.158167996790568,0.609958401380546,1.29606408986162,1.67270636811575,1.9652630737156,3.50647300600534,2.31429676030941,6.28214260761671,8.55458823725833,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.403304740547362,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0,0,0,0.563047426353546,7.14291334642334,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0,0.280924522409647,0.576226371643824,0.402048282689293,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.592302255241736,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.935726433781634,0.644613162144895,0,0,0 | |phase1_expression=9.28863313207805,16.0528687514106,20.0199665331396,6.65421264875026,7.01254021924886,9.40123922706583,11.9142446703718,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,9.91953021319121,12.6175104586944,20.0981187440257,16.7997178502039,20.0388246397877,20.332505881832,14.617747526076,28.1597748532237,0,0,0,2.59966457776147,3.32469290716985,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,2.03991400112325,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,1.73192832808971,2.02687892380079,2.52762222507392,2.39786147410026,0,0,0,0,0.230615497256059,0,0,0,0.988779870937496,0,0,0,0,0,11.1835056730873,0,0,15.8383374229327,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6327666559585,24.8583532663732,0.426576501070468,1.16118335930219,2.44848176511977,3.83198696784351,6.22658522765637,7.03834816616469,12.3377556001573,7.08205505313247,8.29406189040889,8.55512829776949,6.82374304916921,10.7858329038507,11.0230405436094,10.3553462092271,0.758671603812327,0.114248512609729,0,0.814605311381257,0.581857461502877,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0.123397163921801,0.592905254174298,0,0.786235980452812,0.224862112384854,0.405720242777006,1.20588579876208,0.763877555344259,1.72617682470486,0.162135226775035,1.92192989231657,0,0.744281895337007,0.936113019343682,0.252578877947112,0.896987067609561,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,2.45186603682668,1.47650946440386,1.84461088766356,1.55056975900933,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,0,0.422190474497091,1.07435109602823,1.31312719796049,6.99554007911642,0,0,0,0.185194527369712,0,0,0,0,0,0,9.54670618015114,0.158167996790568,0.609958401380546,1.29606408986162,1.67270636811575,1.9652630737156,3.50647300600534,2.31429676030941,6.28214260761671,8.55458823725833,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.403304740547362,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0,0,0,0.563047426353546,7.14291334642334,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0,0.280924522409647,0.576226371643824,0.402048282689293,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.592302255241736,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.935726433781634,0.644613162144895,0,0,0 | ||
|short_description=p3@2510049J12Rik | |short_description=p3@2510049J12Rik | ||
}} | }} |
Latest revision as of 12:01, 26 September 2015
Short description: | p3@2510049J12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2510049J12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 19bp_to_ENSMUST00000088962_5end |
EntrezGene: | 2510049J12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.48e-16 | 25 |
intestinal epithelial cell | 4.89e-13 | 9 |
epithelial cell of alimentary canal | 4.89e-13 | 9 |
endo-epithelial cell | 3.80e-12 | 15 |
columnar/cuboidal epithelial cell | 6.02e-11 | 7 |
endodermal cell | 7.76e-10 | 20 |
brush border epithelial cell | 8.06e-10 | 6 |
gut absorptive cell | 8.06e-10 | 6 |
enterocyte | 8.06e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.28e-41 | 31 |
gastrointestinal system | 3.55e-40 | 47 |
mucosa | 2.17e-22 | 15 |
intestinal mucosa | 1.82e-19 | 13 |
wall of intestine | 1.82e-19 | 13 |
gastrointestinal system mucosa | 1.82e-19 | 13 |
digestive system | 2.79e-19 | 116 |
digestive tract | 2.79e-19 | 116 |
primitive gut | 2.79e-19 | 116 |
endoderm-derived structure | 9.72e-19 | 118 |
endoderm | 9.72e-19 | 118 |
presumptive endoderm | 9.72e-19 | 118 |
subdivision of digestive tract | 2.42e-17 | 114 |
simple columnar epithelium | 1.61e-15 | 11 |
epithelium of mucosa | 4.89e-13 | 9 |
gastrointestinal system epithelium | 4.89e-13 | 9 |
intestinal epithelium | 4.89e-13 | 9 |
organ component layer | 2.52e-12 | 24 |
small intestine | 1.66e-07 | 4 |