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FFCP PHASE1:Mm9::chr6:113647310..113647337,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381801
|EntrezGene=381801
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=F8VQE6,B7ZNL9
|UniProt=F8VQE6,B7ZNL9
|association_with_transcript=-155bp_to_NM_001033463,uc009dhg.1,uc009dhi.2_5end
|association_with_transcript=-155bp_to_NM_001033463,uc009dhg.1,uc009dhi.2_5end
|cluster_id=chr6:113647310..113647337,+
|description=CAGE_peak_3_at_Tatdn2_5end
|description=CAGE_peak_3_at_Tatdn2_5end
|id=chr6:113647310..113647337,+
|id=chr6:113647310..113647337,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,4.89e-10,25;CL:0000223,2.03e-09,20;CL:0002563,2.52e-08,9;CL:0002251,2.52e-08,9;CL:0000239,2.52e-07,6;CL:0000677,2.52e-07,6;CL:0000584,2.52e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.06e-15!130;UBERON:0000925!4.06e-15!130;UBERON:0006595!4.06e-15!130;UBERON:0001007!3.97e-14!128;UBERON:0001555!3.97e-14!128;UBERON:0007026!3.97e-14!128;UBERON:0004921!2.51e-13!126;UBERON:0004185!2.51e-13!126;UBERON:0005409!9.93e-12!59;UBERON:0000160!9.69e-11!43;UBERON:0002365!1.54e-10!25;UBERON:0002330!1.54e-10!25;UBERON:0009854!7.96e-10!23;UBERON:0009856!7.96e-10!23;UBERON:0004923!1.60e-09!24;UBERON:0002107!3.37e-09!22;UBERON:0007499!3.37e-09!22;UBERON:0006925!3.37e-09!22;UBERON:0009497!3.37e-09!22;UBERON:0000015!3.37e-09!22;UBERON:0002423!3.37e-09!22;UBERON:0006235!3.37e-09!22;UBERON:0008835!3.37e-09!22;UBERON:0003894!3.37e-09!22;UBERON:0004161!3.37e-09!22;UBERON:0008836!3.37e-09!22;UBERON:0000344!1.65e-08!15;UBERON:0001242!1.00e-07!13;UBERON:0000060!1.00e-07!13;UBERON:0001262!1.00e-07!13;UBERON:0004786!1.00e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.57e-15,31;UBERON:0004119,1.36e-14,118;UBERON:0000925,1.36e-14,118;UBERON:0006595,1.36e-14,118;UBERON:0002365,1.29e-13,25;UBERON:0002330,1.29e-13,25;UBERON:0001007,2.60e-13,116;UBERON:0001555,2.60e-13,116;UBERON:0007026,2.60e-13,116;UBERON:0000344,6.58e-13,15;UBERON:0009854,1.82e-12,23;UBERON:0009856,1.82e-12,23;UBERON:0004921,2.76e-12,114;UBERON:0001242,1.24e-11,13;UBERON:0001262,1.24e-11,13;UBERON:0004786,1.24e-11,13;UBERON:0002107,1.69e-11,22;UBERON:0007499,1.69e-11,22;UBERON:0006925,1.69e-11,22;UBERON:0009497,1.69e-11,22;UBERON:0000015,1.69e-11,22;UBERON:0002423,1.69e-11,22;UBERON:0006235,1.69e-11,22;UBERON:0008835,1.69e-11,22;UBERON:0003894,1.69e-11,22;UBERON:0004161,1.69e-11,22;UBERON:0008836,1.69e-11,22;UBERON:0004923,3.02e-11,24;UBERON:0005409,6.53e-10,47;UBERON:0003350,2.52e-08,9;UBERON:0004808,2.52e-08,9;UBERON:0001277,2.52e-08,9;UBERON:0003929,3.62e-08,55
|phase1_expression=0,6.2815573375085,1.36499771816861,5.14189159221611,7.01254021924886,3.02182689441402,2.56973904655078,0.129123323441576,0.985521055061667,2.10658073689794,0.513653904676515,0.319088635981346,0,0.0874204024189974,0.999329285446988,1.21485160433896,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,1.43993180514066,1.83527424853736,1.14846392823004,4.30761996159075,1.72376986148711,3.04037471130198,3.02436155711917,1.33038306393183,1.27006134691926,1.84519436275371,0,1.1554064790051,1.49611180822643,1.02084678131185,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,1.94204141212461,0.377690453926732,0.709638518536602,0.367093504323363,0,0.65407546914134,0.219686182734472,0.194429899074283,0.55994568650145,1.43752564364972,0.838913030288682,2.17608642603403,1.34437519656986,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,1.35537812827653,0,2.2497492932035,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,1.12552522006336,0.15279824777681,0,0,0,0.454357159999104,0.529000920747499,1.15945795480671,2.58127163094416,4.75979933595425,4.31762553310254,1.94932925234301,2.68816132258401,1.26399978118577,0.170430322578058,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,2.51204535381932,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.470354828542819,0.628332956648377,0.988779870937496,1.3013942122792,0.884610551949874,0.485300549842228,1.54589062922275,0.484875253135222,3.72783522436244,0,0.209446706813455,1.78819938646014,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.497627882440372,0.505445516867349,1.68353484709179,0,0,0,0,0,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0,0,0,0.61734640922383,0.199034266818493,0,0,1.42081749697796,0.414251545071004,0,0,0.473489471170421,0,0.154267112887378,0,0,0,1.31647879930784,0.32833492815819,0.324275238183423,0.877199924551994,0,0.402619256281115,0.210289948564127,0,1.98251269790279,3.70230793328962,0,0,0.257734922644187,0.605050573870028,0,1.14135375667535,0.949058123089023,2.47048432086016,1.00534083520108,1.79060824837036,2.33956904542944,2.69645822596266,1.29682829924817,1.7922714592893,0,0.114248512609729,0,0,0,0.561086559122548,0.379419222745544,0.885660887877613,1.255989822731,1.1105744752962,1.77871576252289,0.333690211432188,1.37591296579242,0.674586337154561,0.405720242777006,0.72353147925725,1.01850340712568,2.30156909960649,2.91843408195064,1.64736847912849,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,2.15276896226295,4.3419916922703,0.739012760666419,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,1.95133647857799,0.472905432318573,0,0.478364305972461,0.81931657357869,0.863424909329478,1.01254341007058,0,1.63171705145613,4.91764273019036,1.10374698521893,0.160550589987792,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0.485561272309963,0.906970670894253,1.13163047853539,0,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,1.58018378967908,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0,1.87737366450968,2.75381692122966,1.54369878638473,0.65954501176592,0.645857706783622,0.542816324353403,0.238744688006273,1.14898629821543,2.62332752966866,0,0.683483523191411,0.206386867963223,0.740778109478847,1.31857919903284,0.410082683163076,1.83022538565218,0.509935289981566,0.419854356970974,0.967399816630967,0.954670618015114,0.316335993581135,0.203319467126849,0.756037385752609,0.418176592028937,0.655087691238533,0.674321731924103,0.991841468704031,0.523511883968059,3.75883422546199,1.86401793926078,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0,0.192423683280659,0.116876902181569,1.58711268530648,2.66383144048878,1.61484941897056,2.01461539636894,0.579568782096571,1.68914227906064,0.183151624267265,1.50057865355346,1.50471631210609,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.384150914429216,0.574354689556133,0,0.695305955669133,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.507687647350059,0.365855945745545,0,0.271608227691724,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.464810523557898,0,0.749431733813838,0.701794825336225,1.07435527024149,1.14772999241306,0.441182838239031,0.463735671240843
|phase1_expression=0,6.2815573375085,1.36499771816861,5.14189159221611,7.01254021924886,3.02182689441402,2.56973904655078,0.129123323441576,0.985521055061667,2.10658073689794,0.513653904676515,0.319088635981346,0,0.0874204024189974,0.999329285446988,1.21485160433896,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,1.43993180514066,1.83527424853736,1.14846392823004,4.30761996159075,1.72376986148711,3.04037471130198,3.02436155711917,1.33038306393183,1.27006134691926,1.84519436275371,0,1.1554064790051,1.49611180822643,1.02084678131185,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,1.94204141212461,0.377690453926732,0.709638518536602,0.367093504323363,0,0.65407546914134,0.219686182734472,0.194429899074283,0.55994568650145,1.43752564364972,0.838913030288682,2.17608642603403,1.34437519656986,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,1.35537812827653,0,2.2497492932035,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,1.12552522006336,0.15279824777681,0,0,0,0.454357159999104,0.529000920747499,1.15945795480671,2.58127163094416,4.75979933595425,4.31762553310254,1.94932925234301,2.68816132258401,1.26399978118577,0.170430322578058,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,2.51204535381932,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.470354828542819,0.628332956648377,0.988779870937496,1.3013942122792,0.884610551949874,0.485300549842228,1.54589062922275,0.484875253135222,3.72783522436244,0,0.209446706813455,1.78819938646014,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.497627882440372,0.505445516867349,1.68353484709179,0,0,0,0,0,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0,0,0,0.61734640922383,0.199034266818493,0,0,1.42081749697796,0.414251545071004,0,0,0.473489471170421,0,0.154267112887378,0,0,0,1.31647879930784,0.32833492815819,0.324275238183423,0.877199924551994,0,0.402619256281115,0.210289948564127,0,1.98251269790279,3.70230793328962,0,0,0.257734922644187,0.605050573870028,0,1.14135375667535,0.949058123089023,2.47048432086016,1.00534083520108,1.79060824837036,2.33956904542944,2.69645822596266,1.29682829924817,1.7922714592893,0,0.114248512609729,0,0,0,0.561086559122548,0.379419222745544,0.885660887877613,1.255989822731,1.1105744752962,1.77871576252289,0.333690211432188,1.37591296579242,0.674586337154561,0.405720242777006,0.72353147925725,1.01850340712568,2.30156909960649,2.91843408195064,1.64736847912849,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,2.15276896226295,4.3419916922703,0.739012760666419,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,1.95133647857799,0.472905432318573,0,0.478364305972461,0.81931657357869,0.863424909329478,1.01254341007058,0,1.63171705145613,4.91764273019036,1.10374698521893,0.160550589987792,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0.485561272309963,0.906970670894253,1.13163047853539,0,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,1.58018378967908,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0,1.87737366450968,2.75381692122966,1.54369878638473,0.65954501176592,0.645857706783622,0.542816324353403,0.238744688006273,1.14898629821543,2.62332752966866,0,0.683483523191411,0.206386867963223,0.740778109478847,1.31857919903284,0.410082683163076,1.83022538565218,0.509935289981566,0.419854356970974,0.967399816630967,0.954670618015114,0.316335993581135,0.203319467126849,0.756037385752609,0.418176592028937,0.655087691238533,0.674321731924103,0.991841468704031,0.523511883968059,3.75883422546199,1.86401793926078,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0,0.192423683280659,0.116876902181569,1.58711268530648,2.66383144048878,1.61484941897056,2.01461539636894,0.579568782096571,1.68914227906064,0.183151624267265,1.50057865355346,1.50471631210609,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.384150914429216,0.574354689556133,0,0.695305955669133,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.507687647350059,0.365855945745545,0,0.271608227691724,0.56114227165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|short_description=p3@Tatdn2
|short_description=p3@Tatdn2
}}
}}

Latest revision as of 11:40, 26 September 2015

Short description:p3@Tatdn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tatdn2_5end
Coexpression cluster:NA
Association with transcript: -155bp_to_NM_001033463, uc009dhg.1, uc009dhi.2_5end
EntrezGene:Tatdn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tatdn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.89e-1025
endodermal cell2.03e-0920
intestinal epithelial cell2.52e-089
epithelial cell of alimentary canal2.52e-089
brush border epithelial cell2.52e-076
gut absorptive cell2.52e-076
enterocyte2.52e-076

Uber anatomy
Ontology termp-valuen
intestine5.57e-1531
endoderm-derived structure1.36e-14118
endoderm1.36e-14118
presumptive endoderm1.36e-14118
exocrine gland1.29e-1325
exocrine system1.29e-1325
digestive system2.60e-13116
digestive tract2.60e-13116
primitive gut2.60e-13116
mucosa6.58e-1315
digestive tract diverticulum1.82e-1223
sac1.82e-1223
subdivision of digestive tract2.76e-12114
intestinal mucosa1.24e-1113
wall of intestine1.24e-1113
gastrointestinal system mucosa1.24e-1113
liver1.69e-1122
epithelial sac1.69e-1122
digestive gland1.69e-1122
epithelium of foregut-midgut junction1.69e-1122
anatomical boundary1.69e-1122
hepatobiliary system1.69e-1122
foregut-midgut junction1.69e-1122
hepatic diverticulum1.69e-1122
liver primordium1.69e-1122
septum transversum1.69e-1122
liver bud1.69e-1122
organ component layer3.02e-1124
gastrointestinal system6.53e-1047
epithelium of mucosa2.52e-089
gastrointestinal system epithelium2.52e-089
intestinal epithelium2.52e-089
gut epithelium3.62e-0855
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