FFCP PHASE1:Mm9::chr14:9211413..9211437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18300 | |EntrezGene=18300 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P97805 | |UniProt=P97805 | ||
|association_with_transcript=-136bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | |association_with_transcript=-136bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | ||
|cluster_id=chr14:9211413..9211437,- | |||
|description=CAGE_peak_5_at_Oit1_5end | |description=CAGE_peak_5_at_Oit1_5end | ||
|id=chr14:9211413..9211437,- | |id=chr14:9211413..9211437,- | ||
|ontology_enrichment_celltype=CL:0002563!3.81e-10!9;CL:0002251!3.81e-10!9;CL:0002076!1.91e-09!15;CL:0000239!2.00e-07!6;CL:0000677!2.00e-07!6;CL:0000212!2.00e-07!6;CL:0000584!2.00e-07!6;CL:0000066!3.14e-07!25 | |ontology_enrichment_celltype=CL:0002563!3.81e-10!9;CL:0002251!3.81e-10!9;CL:0002076!1.91e-09!15;CL:0000239!2.00e-07!6;CL:0000677!2.00e-07!6;CL:0000212!2.00e-07!6;CL:0000584!2.00e-07!6;CL:0000066!3.14e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.85e-19,15;CL:0002563,6.81e-19,9;CL:0002251,6.81e-19,9;CL:0000066,1.17e-16,25;CL:0000223,1.52e-13,20;CL:0000239,2.07e-13,6;CL:0000677,2.07e-13,6;CL:0000584,2.07e-13,6;CL:0000075,2.29e-11,7;CL:0000682,2.90e-07,3;CL:0000068,3.68e-07,3;CL:0002202,3.68e-07,3;CL:0000069,3.68e-07,3;CL:0002632,3.68e-07,3;CL:0002368,3.68e-07,3;CL:0000307,3.68e-07,3;CL:0000377,3.68e-07,3;CL:0002250,4.67e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.35e-22!128;UBERON:0001555!5.35e-22!128;UBERON:0007026!5.35e-22!128;UBERON:0004119!2.72e-21!130;UBERON:0000925!2.72e-21!130;UBERON:0006595!2.72e-21!130;UBERON:0004921!1.77e-20!126;UBERON:0004185!1.77e-20!126;UBERON:0005409!5.32e-18!59;UBERON:0000160!1.13e-15!43;UBERON:0000344!3.75e-15!15;UBERON:0001242!1.81e-13!13;UBERON:0000060!1.81e-13!13;UBERON:0001262!1.81e-13!13;UBERON:0004786!1.81e-13!13;UBERON:0003350!3.81e-10!9;UBERON:0004808!3.81e-10!9;UBERON:0001277!3.81e-10!9;UBERON:0001004!6.87e-08!42;UBERON:0000485!9.79e-08!11;UBERON:0000065!2.11e-07!41;UBERON:0004923!2.16e-07!24;UBERON:0000481!9.03e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.91e-29,15;UBERON:0005409,6.95e-29,47;UBERON:0000160,8.58e-29,31;UBERON:0001242,1.28e-25,13;UBERON:0001262,1.28e-25,13;UBERON:0004786,1.28e-25,13;UBERON:0001007,3.58e-19,116;UBERON:0001555,3.58e-19,116;UBERON:0007026,3.58e-19,116;UBERON:0003350,6.81e-19,9;UBERON:0004808,6.81e-19,9;UBERON:0001277,6.81e-19,9;UBERON:0004119,1.07e-18,118;UBERON:0000925,1.07e-18,118;UBERON:0006595,1.07e-18,118;UBERON:0004921,4.48e-17,114;UBERON:0004923,1.04e-16,24;UBERON:0000485,4.21e-15,11;UBERON:0002108,8.59e-08,4;UBERON:0003126,3.68e-07,3;UBERON:0001005,3.68e-07,3;UBERON:0007196,3.68e-07,3;UBERON:0001558,3.68e-07,3 | |||
|phase1_expression=0,6.63053274514786,9.09998478779072,6.35174843744343,9.5170188689806,3.52546471014969,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.19984845586813,2.52350209173887,4.59385571292016,4.30761996159075,4.30942465371778,2.85035129184561,2.01624103807945,2.21730510655305,0,0,0,2.59966457776147,3.98963148860382,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,5.19578498426914,2.78695852022608,4.54972000513305,1.25602267690966,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,7.93351699990633,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,2.84717436926707,0.823494773620054,1.00534083520108,0.198956472041151,0.58489226135736,3.59527763461689,4.97117514711797,5.77509692437665,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,1.34005005953453,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,1.01659733563424,0.540026704109006,1.04544148007234,0.87345025498471,0.809186078308924,1.90102948168273,2.35580347785627,4.53652406521275,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,1.74608627180206,1.03936658382236,1.43221356533985,0.596044064343795,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0,0,0,0,0,4.63655025677257,1.12609485270709,1.46521299413812,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,6.63053274514786,9.09998478779072,6.35174843744343,9.5170188689806,3.52546471014969,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.19984845586813,2.52350209173887,4.59385571292016,4.30761996159075,4.30942465371778,2.85035129184561,2.01624103807945,2.21730510655305,0,0,0,2.59966457776147,3.98963148860382,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,5.19578498426914,2.78695852022608,4.54972000513305,1.25602267690966,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,7.93351699990633,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,2.84717436926707,0.823494773620054,1.00534083520108,0.198956472041151,0.58489226135736,3.59527763461689,4.97117514711797,5.77509692437665,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,1.34005005953453,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,1.01659733563424,0.540026704109006,1.04544148007234,0.87345025498471,0.809186078308924,1.90102948168273,2.35580347785627,4.53652406521275,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,1.74608627180206,1.03936658382236,1.43221356533985,0.596044064343795,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0,0,0,0,0,4.63655025677257,1.12609485270709,1.46521299413812,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p5@Oit1 | |short_description=p5@Oit1 | ||
}} | }} |
Latest revision as of 11:38, 26 September 2015
Short description: | p5@Oit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Oit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -136bp_to_ENSMUST00000022269, NM_146050, uc007sfd.1_5end |
EntrezGene: | Oit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.85e-19 | 15 |
intestinal epithelial cell | 6.81e-19 | 9 |
epithelial cell of alimentary canal | 6.81e-19 | 9 |
epithelial cell | 1.17e-16 | 25 |
endodermal cell | 1.52e-13 | 20 |
brush border epithelial cell | 2.07e-13 | 6 |
gut absorptive cell | 2.07e-13 | 6 |
enterocyte | 2.07e-13 | 6 |
columnar/cuboidal epithelial cell | 2.29e-11 | 7 |
M cell of gut | 2.90e-07 | 3 |
duct epithelial cell | 3.68e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.68e-07 | 3 |
branched duct epithelial cell | 3.68e-07 | 3 |
epithelial cell of lower respiratory tract | 3.68e-07 | 3 |
respiratory epithelial cell | 3.68e-07 | 3 |
tracheal epithelial cell | 3.68e-07 | 3 |
tracheoblast | 3.68e-07 | 3 |
intestinal crypt stem cell | 4.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.91e-29 | 15 |
gastrointestinal system | 6.95e-29 | 47 |
intestine | 8.58e-29 | 31 |
intestinal mucosa | 1.28e-25 | 13 |
wall of intestine | 1.28e-25 | 13 |
gastrointestinal system mucosa | 1.28e-25 | 13 |
digestive system | 3.58e-19 | 116 |
digestive tract | 3.58e-19 | 116 |
primitive gut | 3.58e-19 | 116 |
epithelium of mucosa | 6.81e-19 | 9 |
gastrointestinal system epithelium | 6.81e-19 | 9 |
intestinal epithelium | 6.81e-19 | 9 |
endoderm-derived structure | 1.07e-18 | 118 |
endoderm | 1.07e-18 | 118 |
presumptive endoderm | 1.07e-18 | 118 |
subdivision of digestive tract | 4.48e-17 | 114 |
organ component layer | 1.04e-16 | 24 |
simple columnar epithelium | 4.21e-15 | 11 |
small intestine | 8.59e-08 | 4 |
trachea | 3.68e-07 | 3 |
respiratory airway | 3.68e-07 | 3 |
tracheobronchial tree | 3.68e-07 | 3 |
lower respiratory tract | 3.68e-07 | 3 |