FFCP PHASE1:Mm9::chr14:9211365..9211384,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18300 | |EntrezGene=18300 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1369 | |||
|TSSclassifier=NA | |||
|UniProt=P97805 | |UniProt=P97805 | ||
|association_with_transcript=-88bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | |association_with_transcript=-88bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | ||
|cluster_id=chr14:9211365..9211384,- | |||
|description=CAGE_peak_2_at_Oit1_5end | |description=CAGE_peak_2_at_Oit1_5end | ||
|id=chr14:9211365..9211384,- | |id=chr14:9211365..9211384,- | ||
|ontology_enrichment_celltype=CL:0002563!3.68e-08!9;CL:0002251!3.68e-08!9;CL:0002076!7.04e-07!15 | |ontology_enrichment_celltype=CL:0002563!3.68e-08!9;CL:0002251!3.68e-08!9;CL:0002076!7.04e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.73e-12,9;CL:0002251,7.73e-12,9;CL:0002076,6.59e-11,15;CL:0000066,6.60e-09,25;CL:0000239,1.91e-08,6;CL:0000677,1.91e-08,6;CL:0000584,1.91e-08,6;CL:0000223,2.59e-07,20;CL:0000075,4.69e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.55e-15!128;UBERON:0001555!4.55e-15!128;UBERON:0007026!4.55e-15!128;UBERON:0004119!2.16e-14!130;UBERON:0000925!2.16e-14!130;UBERON:0006595!2.16e-14!130;UBERON:0004921!6.16e-14!126;UBERON:0004185!6.16e-14!126;UBERON:0005409!8.03e-14!59;UBERON:0000160!1.24e-12!43;UBERON:0000344!1.77e-12!15;UBERON:0001242!4.33e-11!13;UBERON:0000060!4.33e-11!13;UBERON:0001262!4.33e-11!13;UBERON:0004786!4.33e-11!13;UBERON:0003350!3.68e-08!9;UBERON:0004808!3.68e-08!9;UBERON:0001277!3.68e-08!9 | |ontology_enrichment_uberon=UBERON:0001007!4.55e-15!128;UBERON:0001555!4.55e-15!128;UBERON:0007026!4.55e-15!128;UBERON:0004119!2.16e-14!130;UBERON:0000925!2.16e-14!130;UBERON:0006595!2.16e-14!130;UBERON:0004921!6.16e-14!126;UBERON:0004185!6.16e-14!126;UBERON:0005409!8.03e-14!59;UBERON:0000160!1.24e-12!43;UBERON:0000344!1.77e-12!15;UBERON:0001242!4.33e-11!13;UBERON:0000060!4.33e-11!13;UBERON:0001262!4.33e-11!13;UBERON:0004786!4.33e-11!13;UBERON:0003350!3.68e-08!9;UBERON:0004808!3.68e-08!9;UBERON:0001277!3.68e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.29e-29,47;UBERON:0000160,1.52e-27,31;UBERON:0000344,1.47e-18,15;UBERON:0001242,2.15e-16,13;UBERON:0001262,2.15e-16,13;UBERON:0004786,2.15e-16,13;UBERON:0001007,4.96e-14,116;UBERON:0001555,4.96e-14,116;UBERON:0007026,4.96e-14,116;UBERON:0004119,1.51e-13,118;UBERON:0000925,1.51e-13,118;UBERON:0006595,1.51e-13,118;UBERON:0004921,1.25e-12,114;UBERON:0003350,7.73e-12,9;UBERON:0004808,7.73e-12,9;UBERON:0001277,7.73e-12,9;UBERON:0004923,9.24e-10,24;UBERON:0000485,3.21e-09,11;UBERON:0000161,8.26e-07,5 | |||
|phase1_expression=0,55.138114407019,53.2349110085757,85.2949075885261,64.1146534331324,18.8024784541317,21.0251376535973,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,29.1186209484,23.1703373877842,47.6612530215467,33.5994357004078,29.3040876452809,29.0735831768252,21.1705308998342,27.2728528106025,0,0,0,33.5067878911479,33.413163717057,38.179669621063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,14.0444420131752,0,0,0,0,0,0,0,15.3708639117962,13.1747130047051,14.1546844604139,15.6431915215112,5.95557132388495,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,124.882480016142,0,0,65.652463188608,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,1.89397670297827,0,0,0,0.150704817835715,0.204109497453984,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,139.767145202147,68.7571473325215,0,0.232236671860439,1.03093969057675,0.80673409849337,1.77902435075896,6.65789691393957,26.5736274464927,3.12928013975621,15.0801125280162,13.3300836267571,12.6726656627428,19.7740269903929,80.4033545533863,90.8084206039915,0.189667900953082,0.456994050438915,0,0.407302655690628,0.775809948670503,0.350679099451593,0.126473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,1.97964147567043,0,0,0,0,0,0.307435147943927,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,48.2957191740367,0,0,0,0,0.820704498725306,6.70405924248657,0,0,0,0,0,0,0,0,0,0,83.0563437673149,0,2.23651413839534,3.02414954301044,8.15444354456428,7.64268973111622,5.66430254816247,7.93473174963225,49.7336289769656,95.3966203427595,116.811790860342,0,0,0.165458490457098,0,0,0,0,0.39061315453185,0,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.909445760844565,0.537080087002444,0.993406773906324,0.961563596159751,0.590758108698309,0.504832249740738,0.838274873204998,0.705783295957884,1.16949456887703,0.481059208201647,1.05189211963412,4.98806843953465,0,0.179427713218951,0,19.8985281853156,6.19352168988901,18.3151624267265,24.4379952150135,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.77435509923168,1.32038438970253,0.936415074698824,0.768301828858431,0.516919220600519,0.952587382566147,0.463537303779422,0.964546102318525,1.23625770240992,1.17759136107518,0.342869252385415,0.887379030796687,1.1921809497366,0.581385666529314,1.59985946706062,0.846146078916765,0.914639864363863,1.8414879800649,1.08643291076689,2.80571135828869,1.30498519936592,0.985044823755635,2.04615521584845,1.39443157067369,1.15743966588685,0.999242311751784,1.40358965067245,1.71896843238639,1.14772999241306,3.52946270591225,0.463735671240843 | |phase1_expression=0,55.138114407019,53.2349110085757,85.2949075885261,64.1146534331324,18.8024784541317,21.0251376535973,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,29.1186209484,23.1703373877842,47.6612530215467,33.5994357004078,29.3040876452809,29.0735831768252,21.1705308998342,27.2728528106025,0,0,0,33.5067878911479,33.413163717057,38.179669621063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,14.0444420131752,0,0,0,0,0,0,0,15.3708639117962,13.1747130047051,14.1546844604139,15.6431915215112,5.95557132388495,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,124.882480016142,0,0,65.652463188608,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,1.89397670297827,0,0,0,0.150704817835715,0.204109497453984,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,139.767145202147,68.7571473325215,0,0.232236671860439,1.03093969057675,0.80673409849337,1.77902435075896,6.65789691393957,26.5736274464927,3.12928013975621,15.0801125280162,13.3300836267571,12.6726656627428,19.7740269903929,80.4033545533863,90.8084206039915,0.189667900953082,0.456994050438915,0,0.407302655690628,0.775809948670503,0.350679099451593,0.126473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,1.97964147567043,0,0,0,0,0,0.307435147943927,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,48.2957191740367,0,0,0,0,0.820704498725306,6.70405924248657,0,0,0,0,0,0,0,0,0,0,83.0563437673149,0,2.23651413839534,3.02414954301044,8.15444354456428,7.64268973111622,5.66430254816247,7.93473174963225,49.7336289769656,95.3966203427595,116.811790860342,0,0,0.165458490457098,0,0,0,0,0.39061315453185,0,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.909445760844565,0.537080087002444,0.993406773906324,0.961563596159751,0.590758108698309,0.504832249740738,0.838274873204998,0.705783295957884,1.16949456887703,0.481059208201647,1.05189211963412,4.98806843953465,0,0.179427713218951,0,19.8985281853156,6.19352168988901,18.3151624267265,24.4379952150135,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.77435509923168,1.32038438970253,0.936415074698824,0.768301828858431,0.516919220600519,0.952587382566147,0.463537303779422,0.964546102318525,1.23625770240992,1.17759136107518,0.342869252385415,0.887379030796687,1.1921809497366,0.581385666529314,1.59985946706062,0.846146078916765,0.914639864363863,1.8414879800649,1.08643291076689,2.80571135828869,1.30498519936592,0.985044823755635,2.04615521584845,1.39443157067369,1.15743966588685,0.999242311751784,1.40358965067245,1.71896843238639,1.14772999241306,3.52946270591225,0.463735671240843 | ||
|short_description=p2@Oit1 | |short_description=p2@Oit1 | ||
}} | }} |
Latest revision as of 11:37, 26 September 2015
Short description: | p2@Oit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Oit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1369 |
Association with transcript: | -88bp_to_ENSMUST00000022269, NM_146050, uc007sfd.1_5end |
EntrezGene: | Oit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.73e-12 | 9 |
epithelial cell of alimentary canal | 7.73e-12 | 9 |
endo-epithelial cell | 6.59e-11 | 15 |
epithelial cell | 6.60e-09 | 25 |
brush border epithelial cell | 1.91e-08 | 6 |
gut absorptive cell | 1.91e-08 | 6 |
enterocyte | 1.91e-08 | 6 |
endodermal cell | 2.59e-07 | 20 |
columnar/cuboidal epithelial cell | 4.69e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.29e-29 | 47 |
intestine | 1.52e-27 | 31 |
mucosa | 1.47e-18 | 15 |
intestinal mucosa | 2.15e-16 | 13 |
wall of intestine | 2.15e-16 | 13 |
gastrointestinal system mucosa | 2.15e-16 | 13 |
digestive system | 4.96e-14 | 116 |
digestive tract | 4.96e-14 | 116 |
primitive gut | 4.96e-14 | 116 |
endoderm-derived structure | 1.51e-13 | 118 |
endoderm | 1.51e-13 | 118 |
presumptive endoderm | 1.51e-13 | 118 |
subdivision of digestive tract | 1.25e-12 | 114 |
epithelium of mucosa | 7.73e-12 | 9 |
gastrointestinal system epithelium | 7.73e-12 | 9 |
intestinal epithelium | 7.73e-12 | 9 |
organ component layer | 9.24e-10 | 24 |
simple columnar epithelium | 3.21e-09 | 11 |
orifice | 8.26e-07 | 5 |