FFCP PHASE1:Mm9::chr17:37004061..37004104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69097 | |EntrezGene=69097 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R096 | |UniProt=Q8R096 | ||
|association_with_transcript=27bp_to_ENSMUST00000025329,NM_001024134_5end | |||
|cluster_id=chr17:37004061..37004104,- | |||
|description=CAGE_peak_1_at_Trim15_5end | |||
|id=chr17:37004061..37004104,- | |||
|ontology_enrichment_celltype=CL:0002563!2.02e-12!9;CL:0002251!2.02e-12!9;CL:0002076!4.29e-12!15;CL:0000066!2.32e-10!25;CL:0000239!1.73e-09!6;CL:0000677!1.73e-09!6;CL:0000212!1.73e-09!6;CL:0000584!1.73e-09!6;CL:0000223!3.05e-08!20;CL:0000075!5.86e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.64e-16,15;CL:0000066,3.24e-15,25;CL:0002563,3.37e-15,9;CL:0002251,3.37e-15,9;CL:0000239,4.12e-14,6;CL:0000677,4.12e-14,6;CL:0000584,4.12e-14,6;CL:0000075,5.56e-12,7;CL:0000223,1.57e-11,20;CL:0000682,2.14e-08,3;CL:0000068,3.58e-07,3;CL:0002202,3.58e-07,3;CL:0000069,3.58e-07,3;CL:0002632,3.58e-07,3;CL:0002368,3.58e-07,3;CL:0000307,3.58e-07,3;CL:0000377,3.58e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.91e-23!43;UBERON:0005409!3.14e-22!59;UBERON:0000344!9.83e-21!15;UBERON:0001242!4.44e-18!13;UBERON:0000060!4.44e-18!13;UBERON:0001262!4.44e-18!13;UBERON:0004786!4.44e-18!13;UBERON:0004923!1.98e-16!24;UBERON:0003350!2.02e-12!9;UBERON:0004808!2.02e-12!9;UBERON:0001277!2.02e-12!9;UBERON:0004119!1.98e-10!130;UBERON:0000925!1.98e-10!130;UBERON:0006595!1.98e-10!130;UBERON:0000485!9.66e-10!11;UBERON:0001007!2.20e-09!128;UBERON:0001555!2.20e-09!128;UBERON:0007026!2.20e-09!128;UBERON:0004921!3.75e-08!126;UBERON:0004185!3.75e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-40,31;UBERON:0000344,3.47e-28,15;UBERON:0005409,5.65e-27,47;UBERON:0001242,5.26e-24,13;UBERON:0001262,5.26e-24,13;UBERON:0004786,5.26e-24,13;UBERON:0004923,5.07e-19,24;UBERON:0003350,3.37e-15,9;UBERON:0004808,3.37e-15,9;UBERON:0001277,3.37e-15,9;UBERON:0001007,4.86e-13,116;UBERON:0001555,4.86e-13,116;UBERON:0007026,4.86e-13,116;UBERON:0004119,1.08e-12,118;UBERON:0000925,1.08e-12,118;UBERON:0006595,1.08e-12,118;UBERON:0000485,3.57e-12,11;UBERON:0004921,3.93e-11,114;UBERON:0002108,6.82e-10,4;UBERON:0000331,3.67e-08,3;UBERON:0002116,3.67e-08,3;UBERON:0001204,3.67e-08,3;UBERON:0001168,3.67e-08,3;UBERON:0003126,3.58e-07,3;UBERON:0001005,3.58e-07,3;UBERON:0007196,3.58e-07,3;UBERON:0001558,3.58e-07,3 | |||
|phase1_expression=0,37.689344025051,40.9499315450582,7.56160528267075,6.51164448930251,11.0800319461847,12.6150825921584,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,8.63959083084396,11.6998733344257,35.0281498110162,30.1533397311352,35.3372821604858,19.0023419456374,8.31699428207772,52.1066700039966,0,0,0,2.02196133825892,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,6.71122227134764,7.34743609877786,8.08839112023653,1.02765491747154,0,0,0,0,0,0,0,0,13.8429181931249,0,0,0,0,0,7.45567044872489,0,0,14.8165092020983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.015647345234,12.164726066523,0,0,0.257734922644187,0.201683524623343,0.22237804384487,1.71203063501303,10.4396393539793,3.12928013975621,3.2673577144035,2.98434708061726,3.70431765526328,11.6846523125049,7.78096979548899,6.57166201739412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0.134864346384821,0.330613822901344,0.26175594198403,8.29535829067474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,8.79127796482872,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,37.689344025051,40.9499315450582,7.56160528267075,6.51164448930251,11.0800319461847,12.6150825921584,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,8.63959083084396,11.6998733344257,35.0281498110162,30.1533397311352,35.3372821604858,19.0023419456374,8.31699428207772,52.1066700039966,0,0,0,2.02196133825892,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,6.71122227134764,7.34743609877786,8.08839112023653,1.02765491747154,0,0,0,0,0,0,0,0,13.8429181931249,0,0,0,0,0,7.45567044872489,0,0,14.8165092020983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.015647345234,12.164726066523,0,0,0.257734922644187,0.201683524623343,0.22237804384487,1.71203063501303,10.4396393539793,3.12928013975621,3.2673577144035,2.98434708061726,3.70431765526328,11.6846523125049,7.78096979548899,6.57166201739412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0.134864346384821,0.330613822901344,0.26175594198403,8.29535829067474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,8.79127796482872,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p1@Trim15 | |||
}} | }} |
Latest revision as of 11:16, 26 September 2015
Short description: | p1@Trim15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim15_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 27bp_to_ENSMUST00000025329, NM_001024134_5end |
EntrezGene: | Trim15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.64e-16 | 15 |
epithelial cell | 3.24e-15 | 25 |
intestinal epithelial cell | 3.37e-15 | 9 |
epithelial cell of alimentary canal | 3.37e-15 | 9 |
brush border epithelial cell | 4.12e-14 | 6 |
gut absorptive cell | 4.12e-14 | 6 |
enterocyte | 4.12e-14 | 6 |
columnar/cuboidal epithelial cell | 5.56e-12 | 7 |
endodermal cell | 1.57e-11 | 20 |
M cell of gut | 2.14e-08 | 3 |
duct epithelial cell | 3.58e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.58e-07 | 3 |
branched duct epithelial cell | 3.58e-07 | 3 |
epithelial cell of lower respiratory tract | 3.58e-07 | 3 |
respiratory epithelial cell | 3.58e-07 | 3 |
tracheal epithelial cell | 3.58e-07 | 3 |
tracheoblast | 3.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.52e-40 | 31 |
mucosa | 3.47e-28 | 15 |
gastrointestinal system | 5.65e-27 | 47 |
intestinal mucosa | 5.26e-24 | 13 |
wall of intestine | 5.26e-24 | 13 |
gastrointestinal system mucosa | 5.26e-24 | 13 |
organ component layer | 5.07e-19 | 24 |
epithelium of mucosa | 3.37e-15 | 9 |
gastrointestinal system epithelium | 3.37e-15 | 9 |
intestinal epithelium | 3.37e-15 | 9 |
digestive system | 4.86e-13 | 116 |
digestive tract | 4.86e-13 | 116 |
primitive gut | 4.86e-13 | 116 |
endoderm-derived structure | 1.08e-12 | 118 |
endoderm | 1.08e-12 | 118 |
presumptive endoderm | 1.08e-12 | 118 |
simple columnar epithelium | 3.57e-12 | 11 |
subdivision of digestive tract | 3.93e-11 | 114 |
small intestine | 6.82e-10 | 4 |
ileal mucosa | 3.67e-08 | 3 |
ileum | 3.67e-08 | 3 |
mucosa of small intestine | 3.67e-08 | 3 |
wall of small intestine | 3.67e-08 | 3 |
trachea | 3.58e-07 | 3 |
respiratory airway | 3.58e-07 | 3 |
tracheobronchial tree | 3.58e-07 | 3 |
lower respiratory tract | 3.58e-07 | 3 |