FFCP PHASE1:Mm9::chr17:36327066..36327103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100505334,100505361,15043,633417 | |EntrezGene=100505334,100505361,15043,633417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=G3UZL7,Q05A75,G3UZR8,Q8HWB4,Q4KN85 | |UniProt=G3UZL7,Q05A75,G3UZR8,Q8HWB4,Q4KN85 | ||
|association_with_transcript=0bp_to_ENSMUST00000095300,ENSMUST00000097329,ENSMUST00000172663,ENSMUST00000173133,ENSMUST00000173435,ENSMUST00000173629,ENSMUST00000174101,NM_008208,uc008ckm.1,uc012asp.1,uc012asr.1,uc012ass.1,uc012ast.1_5end | |association_with_transcript=0bp_to_ENSMUST00000095300,ENSMUST00000097329,ENSMUST00000172663,ENSMUST00000173133,ENSMUST00000173435,ENSMUST00000173629,ENSMUST00000174101,NM_008208,uc008ckm.1,uc012asp.1,uc012asr.1,uc012ass.1,uc012ast.1_5end | ||
|cluster_id=chr17:36327066..36327103,- | |||
|description=CAGE_peak_1_at_H2-T3_5end,CAGE_peak_1_at_LOC100505334_5end,CAGE_peak_1_at_LOC100505361_5end,CAGE_peak_1_at_LOC633417_5end | |description=CAGE_peak_1_at_H2-T3_5end,CAGE_peak_1_at_LOC100505334_5end,CAGE_peak_1_at_LOC100505361_5end,CAGE_peak_1_at_LOC633417_5end | ||
|id=chr17:36327066..36327103,- | |id=chr17:36327066..36327103,- | ||
Latest revision as of 11:11, 26 September 2015
| Short description: | p1@H2-T3, p1@LOC100505334, p1@LOC100505361, p1@LOC633417 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_H2-T3_5end, CAGE_peak_1_at_LOC100505334_5end, CAGE_peak_1_at_LOC100505361_5end, CAGE_peak_1_at_LOC633417_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_ENSMUST00000095300, ENSMUST00000097329, ENSMUST00000172663, ENSMUST00000173133, ENSMUST00000173435, ENSMUST00000173629, ENSMUST00000174101, NM_008208, uc008ckm.1, uc012asp.1, uc012asr.1, uc012ass.1, uc012ast.1_5end |
| EntrezGene: | 100505334,100505361,15043,633417 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 1.07e-12 | 9 |
| epithelial cell of alimentary canal | 1.07e-12 | 9 |
| brush border epithelial cell | 2.32e-09 | 6 |
| gut absorptive cell | 2.32e-09 | 6 |
| enterocyte | 2.32e-09 | 6 |
| columnar/cuboidal epithelial cell | 7.40e-08 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 9.73e-37 | 31 |
| gastrointestinal system | 2.98e-26 | 47 |
| mucosa | 9.14e-21 | 15 |
| intestinal mucosa | 2.45e-18 | 13 |
| wall of intestine | 2.45e-18 | 13 |
| gastrointestinal system mucosa | 2.45e-18 | 13 |
| epithelium of mucosa | 1.07e-12 | 9 |
| gastrointestinal system epithelium | 1.07e-12 | 9 |
| intestinal epithelium | 1.07e-12 | 9 |
| organ component layer | 3.11e-11 | 24 |
| simple columnar epithelium | 5.77e-10 | 11 |
| small intestine | 5.25e-07 | 4 |
