FFCP PHASE1:Mm9::chr10:80856575..80856586,+: Difference between revisions
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{{FFCP|EntrezGene=72273|HGNC=|MCL_coexpression_id=1255|UniProt=|association_with_transcript=176bp_to_ENSMUST00000129083_5end|description=CAGE_peak_4_at_2210404O07Rik_5end|id=chr10:80856575..80856586,+|ontology_enrichment_celltype=CL:0002563!7.46e-12!9;CL:0002251!7.46e-12!9;CL:0000239!4.30e-09!6;CL:0000677!4.30e-09!6;CL:0000212!4.30e-09!6;CL:0000584!4.30e-09!6;CL:0000075!1.27e-07!7;CL:0000066!7.57e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,3.69e-10,6;CL:0000677,3.69e-10,6;CL:0000584,3.69e-10,6;CL:0000075,1.03e-08,7;CL:0002563,8.88e-07,9;CL:0002251,8.88e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.08e-20!15;UBERON:0005409!1.77e-18!59;UBERON:0000160!7.14e-18!43;UBERON:0001242!5.01e-17!13;UBERON:0000060!5.01e-17!13;UBERON:0001262!5.01e-17!13;UBERON:0004786!5.01e-17!13;UBERON:0004923!1.84e-13!24;UBERON:0003350!7.46e-12!9;UBERON:0004808!7.46e-12!9;UBERON:0001277!7.46e-12!9;UBERON:0000485!2.79e-09!11;UBERON:0001007!8.90e-08!128;UBERON:0001555!8.90e-08!128;UBERON:0007026!8.90e-08!128;UBERON:0004119!1.72e-07!130;UBERON:0000925!1.72e-07!130;UBERON:0006595!1.72e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.73e-29,31;UBERON:0000344,2.08e-18,15;UBERON:0005409,4.76e-18,47;UBERON:0001242,4.38e-13,13;UBERON:0001262,4.38e-13,13;UBERON:0004786,4.38e-13,13;UBERON:0004923,6.16e-11,24;UBERON:0002108,2.42e-08,4;UBERON:0001962,3.69e-08,2;UBERON:0001961,3.69e-08,2;UBERON:0001744,3.69e-08,2;UBERON:0001007,3.32e-07,116;UBERON:0001555,3.32e-07,116;UBERON:0007026,3.32e-07,116;UBERON:0004119,5.08e-07,118;UBERON:0000925,5.08e-07,118;UBERON:0006595,5.08e-07,118;UBERON:0003350,8.88e-07,9;UBERON:0004808,8.88e-07,9;UBERON:0001277,8.88e-07,9|phase1_expression=0,5.58360652222978,3.63999391511629,5.44435580352294,6.01074875935617,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,6.71968175732308,2.52350209173887,2.8711598205751,0.86152399231815,3.23206849028834,7.22088993934221,2.52030129759931,0.886922042621219,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,2.90895623329899,0,0,0.128867461322093,0,0,1.14135375667535,4.74529061544512,2.63518327558417,0.754005626400808,1.79060824837036,0.974820435595601,1.79763881730844,3.02593269824572,1.1948476395262,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0.279902904647316,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,15.2197093444731,0,0,0,0.129159823477731,0,0,0,0,2.17425708743405,3.45636007509439,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p4@2210404O07Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72273 | |||
|HGNC= | |||
|MCL_coexpression_id=1255 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=176bp_to_ENSMUST00000129083_5end | |||
|cluster_id=chr10:80856575..80856586,+ | |||
|description=CAGE_peak_4_at_2210404O07Rik_5end | |||
|id=chr10:80856575..80856586,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.46e-12!9;CL:0002251!7.46e-12!9;CL:0000239!4.30e-09!6;CL:0000677!4.30e-09!6;CL:0000212!4.30e-09!6;CL:0000584!4.30e-09!6;CL:0000075!1.27e-07!7;CL:0000066!7.57e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.69e-10,6;CL:0000677,3.69e-10,6;CL:0000584,3.69e-10,6;CL:0000075,1.03e-08,7;CL:0002563,8.88e-07,9;CL:0002251,8.88e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.08e-20!15;UBERON:0005409!1.77e-18!59;UBERON:0000160!7.14e-18!43;UBERON:0001242!5.01e-17!13;UBERON:0000060!5.01e-17!13;UBERON:0001262!5.01e-17!13;UBERON:0004786!5.01e-17!13;UBERON:0004923!1.84e-13!24;UBERON:0003350!7.46e-12!9;UBERON:0004808!7.46e-12!9;UBERON:0001277!7.46e-12!9;UBERON:0000485!2.79e-09!11;UBERON:0001007!8.90e-08!128;UBERON:0001555!8.90e-08!128;UBERON:0007026!8.90e-08!128;UBERON:0004119!1.72e-07!130;UBERON:0000925!1.72e-07!130;UBERON:0006595!1.72e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.73e-29,31;UBERON:0000344,2.08e-18,15;UBERON:0005409,4.76e-18,47;UBERON:0001242,4.38e-13,13;UBERON:0001262,4.38e-13,13;UBERON:0004786,4.38e-13,13;UBERON:0004923,6.16e-11,24;UBERON:0002108,2.42e-08,4;UBERON:0001962,3.69e-08,2;UBERON:0001961,3.69e-08,2;UBERON:0001744,3.69e-08,2;UBERON:0001007,3.32e-07,116;UBERON:0001555,3.32e-07,116;UBERON:0007026,3.32e-07,116;UBERON:0004119,5.08e-07,118;UBERON:0000925,5.08e-07,118;UBERON:0006595,5.08e-07,118;UBERON:0003350,8.88e-07,9;UBERON:0004808,8.88e-07,9;UBERON:0001277,8.88e-07,9 | |||
|phase1_expression=0,5.58360652222978,3.63999391511629,5.44435580352294,6.01074875935617,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,6.71968175732308,2.52350209173887,2.8711598205751,0.86152399231815,3.23206849028834,7.22088993934221,2.52030129759931,0.886922042621219,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,2.90895623329899,0,0,0.128867461322093,0,0,1.14135375667535,4.74529061544512,2.63518327558417,0.754005626400808,1.79060824837036,0.974820435595601,1.79763881730844,3.02593269824572,1.1948476395262,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0.279902904647316,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,15.2197093444731,0,0,0,0.129159823477731,0,0,0,0,2.17425708743405,3.45636007509439,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p4@2210404O07Rik | |||
}} |
Latest revision as of 11:06, 26 September 2015
Short description: | p4@2210404O07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2210404O07Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1255 |
Association with transcript: | 176bp_to_ENSMUST00000129083_5end |
EntrezGene: | 2210404O07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.69e-10 | 6 |
gut absorptive cell | 3.69e-10 | 6 |
enterocyte | 3.69e-10 | 6 |
columnar/cuboidal epithelial cell | 1.03e-08 | 7 |
intestinal epithelial cell | 8.88e-07 | 9 |
epithelial cell of alimentary canal | 8.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.73e-29 | 31 |
mucosa | 2.08e-18 | 15 |
gastrointestinal system | 4.76e-18 | 47 |
intestinal mucosa | 4.38e-13 | 13 |
wall of intestine | 4.38e-13 | 13 |
gastrointestinal system mucosa | 4.38e-13 | 13 |
organ component layer | 6.16e-11 | 24 |
small intestine | 2.42e-08 | 4 |
gut-associated lymphoid tissue | 3.69e-08 | 2 |
mucosa-associated lymphoid tissue | 3.69e-08 | 2 |
lymphoid tissue | 3.69e-08 | 2 |
digestive system | 3.32e-07 | 116 |
digestive tract | 3.32e-07 | 116 |
primitive gut | 3.32e-07 | 116 |
endoderm-derived structure | 5.08e-07 | 118 |
endoderm | 5.08e-07 | 118 |
presumptive endoderm | 5.08e-07 | 118 |
epithelium of mucosa | 8.88e-07 | 9 |
gastrointestinal system epithelium | 8.88e-07 | 9 |
intestinal epithelium | 8.88e-07 | 9 |