FFCP PHASE1:Mm9::chr7:26465861..26465880,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232987 | |EntrezGene=232987 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=433 | |MCL_coexpression_id=433 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UK10 | |UniProt=Q3UK10 | ||
|association_with_transcript=62bp_to_uc009fto.1_5end | |association_with_transcript=62bp_to_uc009fto.1_5end | ||
|cluster_id=chr7:26465861..26465880,+ | |||
|description=CAGE_peak_2_at_B9d2_5end | |description=CAGE_peak_2_at_B9d2_5end | ||
|id=chr7:26465861..26465880,+ | |id=chr7:26465861..26465880,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.73e-13!32;CL:0002032!6.73e-13!32;CL:0000037!6.73e-13!32;CL:0000566!6.73e-13!32;CL:0000837!6.73e-13!32;CL:0002320!2.18e-10!46;CL:0000134!2.18e-10!46;CL:0000219!2.40e-10!54;CL:0002031!3.23e-09!25;CL:0000723!2.75e-08!91;CL:0000048!2.75e-08!91;CL:0000034!3.08e-08!97;CL:0000049!4.62e-08!19;CL:0000738!5.97e-07!17;CL:0002087!5.97e-07!17 | |ontology_enrichment_celltype=CL:0000988!6.73e-13!32;CL:0002032!6.73e-13!32;CL:0000037!6.73e-13!32;CL:0000566!6.73e-13!32;CL:0000837!6.73e-13!32;CL:0002320!2.18e-10!46;CL:0000134!2.18e-10!46;CL:0000219!2.40e-10!54;CL:0002031!3.23e-09!25;CL:0000723!2.75e-08!91;CL:0000048!2.75e-08!91;CL:0000034!3.08e-08!97;CL:0000049!4.62e-08!19;CL:0000738!5.97e-07!17;CL:0002087!5.97e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-14,32;CL:0002032,3.51e-14,32;CL:0000037,3.51e-14,32;CL:0000837,3.51e-14,32;CL:0000219,5.00e-13,54;CL:0002320,5.88e-13,46;CL:0000134,5.88e-13,46;CL:0000034,1.07e-10,97;CL:0000723,4.63e-10,91;CL:0000048,4.63e-10,91;CL:0002031,7.43e-10,25;CL:0000049,2.70e-09,19;CL:0000763,4.16e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.70e-15!45;UBERON:0003061!4.70e-15!45;UBERON:0002193!5.85e-14!48;UBERON:0002384!2.18e-10!46;UBERON:0007811!3.89e-10!86;UBERON:0002405!1.56e-09!70;UBERON:0004177!5.60e-09!29;UBERON:0000153!2.15e-08!94;UBERON:0003408!8.33e-08!24;UBERON:0001474!1.22e-07!22;UBERON:0004765!1.22e-07!22;UBERON:0001434!1.22e-07!22;UBERON:0002370!1.30e-07!23;UBERON:0000974!1.30e-07!23;UBERON:0004807!1.30e-07!23;UBERON:0005058!1.30e-07!23;UBERON:0003351!1.30e-07!23;UBERON:0009113!1.30e-07!23;UBERON:0003295!1.30e-07!23;UBERON:0009722!1.30e-07!23;UBERON:0005562!1.30e-07!23;UBERON:0007690!1.30e-07!23;UBERON:0002371!4.28e-07!16;UBERON:0006562!7.79e-07!24;UBERON:0001557!7.79e-07!24;UBERON:0001042!7.79e-07!24;UBERON:0008814!7.79e-07!24;UBERON:0009145!7.79e-07!24 | |ontology_enrichment_uberon=UBERON:0002390!4.70e-15!45;UBERON:0003061!4.70e-15!45;UBERON:0002193!5.85e-14!48;UBERON:0002384!2.18e-10!46;UBERON:0007811!3.89e-10!86;UBERON:0002405!1.56e-09!70;UBERON:0004177!5.60e-09!29;UBERON:0000153!2.15e-08!94;UBERON:0003408!8.33e-08!24;UBERON:0001474!1.22e-07!22;UBERON:0004765!1.22e-07!22;UBERON:0001434!1.22e-07!22;UBERON:0002370!1.30e-07!23;UBERON:0000974!1.30e-07!23;UBERON:0004807!1.30e-07!23;UBERON:0005058!1.30e-07!23;UBERON:0003351!1.30e-07!23;UBERON:0009113!1.30e-07!23;UBERON:0003295!1.30e-07!23;UBERON:0009722!1.30e-07!23;UBERON:0005562!1.30e-07!23;UBERON:0007690!1.30e-07!23;UBERON:0002371!4.28e-07!16;UBERON:0006562!7.79e-07!24;UBERON:0001557!7.79e-07!24;UBERON:0001042!7.79e-07!24;UBERON:0008814!7.79e-07!24;UBERON:0009145!7.79e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-17,45;UBERON:0003061,2.73e-17,45;UBERON:0002193,4.48e-15,48;UBERON:0002405,4.48e-15,48;UBERON:0002384,5.88e-13,46;UBERON:0004177,1.56e-10,29;UBERON:0005057,1.56e-10,29;UBERON:0003408,3.93e-09,24;UBERON:0002370,6.66e-09,23;UBERON:0000974,6.66e-09,23;UBERON:0004807,6.66e-09,23;UBERON:0005058,6.66e-09,23;UBERON:0003351,6.66e-09,23;UBERON:0009113,6.66e-09,23;UBERON:0003295,6.66e-09,23;UBERON:0009722,6.66e-09,23;UBERON:0005562,6.66e-09,23;UBERON:0007690,6.66e-09,23;UBERON:0006562,3.50e-08,24;UBERON:0001557,3.50e-08,24;UBERON:0001042,3.50e-08,24;UBERON:0008814,3.50e-08,24;UBERON:0009145,3.50e-08,24;UBERON:0007811,4.28e-08,36;UBERON:0002368,9.30e-08,60;UBERON:0002371,1.19e-07,16;UBERON:0001474,1.42e-07,22;UBERON:0004765,1.42e-07,22;UBERON:0001434,1.42e-07,22;UBERON:0000077,1.73e-07,35;UBERON:0000072,7.62e-07,27 | |||
|phase1_expression=3.84357233051505,0,0.454999239389536,0,0,0.839396359559449,0,7.48915275961142,22.9485617107217,25.7470978954193,0.856089841127525,0.717949430958028,2.22560948910567,4.02133851127388,1.99865857089398,3.84703008040669,4.19737126876888,3.47008381894061,4.38766187538364,2.97072756258621,0.595303031057488,8.53902180327614,12.27639008953,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0,0.443461021310609,5.71527606113668,8.61090702618398,0,0.577703239502549,0,0,2.09265815368454,9.37602413428561,4.18818995179039,0.588231488031014,2.04913645487534,4.36959317728038,1.00717454380462,0.709638518536602,0.367093504323363,3.9119567217402,0.218025156380447,1.97717564461025,1.94429899074283,1.81982348112971,4.31257693094915,8.05356509077134,6.5282592781021,6.04968838456435,0,0,0,3.23706337375356,4.7609188134483,0.633831403506179,1.69422266034566,1.77858959222228,3.1496490104849,1.97773272513395,2.1314403448383,0.898800331555214,4.2264013585371,0.933206510776299,1.62007125998029,2.3135745748652,2.57085885963423,2.87129103237098,1.22490799214954,1.62937300731002,0.919218786610021,0,1.27687338085188,0.614426133024974,1.97829431595291,3.29355516968675,1.56274011167028,1.3959149950069,0.56276261003168,1.83357897332172,2.94628585473668,2.27794689278565,1.1183966749518,0.530083353332288,0.377857800533928,1.15945795480671,0,0,0,1.29955283489534,0,0.702222100658759,1.02258193546835,1.81850203222008,1.41335829804136,1.54927761754349,0,2.54805239706646,0,0.649473123033642,0.253359865475099,1.01104889002957,0.5709193985953,0.776813650941515,1.03909497345377,1.38788261412909,0.304465478312141,1.15307748628029,0.904335843315735,1.41106448562846,1.13099932196708,0.494389935468748,0.144599356919912,5.30766331169925,0.647067399789637,1.98757366614354,0.969750506270444,0,1.17112318804619,0.209446706813455,1.27728527604296,20.967646788536,20.9965955847693,19.0605340609597,1.49790639404823,0.915001205637253,2.76439574648302,0.521472960576829,1.27857728665165,1.66230435647648,2.43361894601636,1.32391173005411,2.36373244159177,2.27450482590307,0.631325567659422,1.04096354370163,2.06911893990126,1.0803727788321,0.90422890701429,1.36072998302656,0.640568601424249,2.52994656311268,1.81092359517311,1.29340795759705,0.189106080167819,0,1.53437012699302,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,4.91549231119264,8.23513302767089,10.5140494776369,0,0.234526059981096,0.720248245844059,0.710234206755631,0.393528463494808,0.308534225774757,0,0.536546802799238,0.350296027101508,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,1.9551876352064,0,0.528901133327089,1.49301775374664,0.928946687441754,1.28867461322093,0,0.667134131534611,0,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.974820435595601,0,0.432276099749388,0.597423819763102,1.89667900953082,0.571242563048644,1.1270773567308,0,0.581857461502877,1.1221731182451,0.822074982615345,1.32849133181642,0.627994911365499,1.48076596706161,0.592905254174298,1.33476084572875,2.35870794135844,1.79889689907883,1.21716072833102,1.68824011826692,2.29163266603278,1.72617682470486,2.43202840162553,2.74561413188081,0,0,0.624075346229121,0.757736633841335,0.179397413521912,0.482443521363367,0.554259570499814,1.51593129416388,0.162964976442026,0.509235257325564,1.64283173801951,1.34005005953453,0.238043640886014,0.975668239288994,0.472905432318573,1.10732344824387,0.956728611944923,1.63863314715738,0.518054945597687,0.433947175744535,3.01582567878545,3.26343410291226,0,0,0.481651769963376,0.937693492737625,0.819674726883377,1.26235463602186,0.631016438832513,0.390438744296638,0.861693590931196,1.19484398976276,0.445597348164788,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,1.28528526568723,0.425820255624806,0.712262414669021,1.79175655288934,0.494910368917606,0,0.728341908464944,1.209294227859,0.565815239267694,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,2.38307724027652,1.08036656418786,1.68166288917581,2.14337035031592,4.43350584105684,4.99432689285798,4.44282355625727,7.30715877875038,0.469343416127421,0,0,0.8244312647074,0.484393280087717,0.663442174209714,0.596861720015682,0.328281799490123,0.874442509889552,0.927126510052548,2.73393409276564,1.65109494370578,1.66675074632741,1.88368457004691,1.91371918809435,2.74533807847827,26.6866135090353,25.1912614182584,24.7377953109919,0,0.474503990371703,0.203319467126849,0.86404272657441,0.209088296014469,0.655087691238533,0.539457385539283,0.330613822901344,0.26175594198403,0.518459893167171,1.86401793926078,0.56369293868419,0.149516546043979,0.330916980914195,0.777804753376191,0.258319646955462,0.337912250981556,0.352071715937262,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,1.89606672376907,5.47358081283443,4.21114924375792,5.58659538804519,5.01274747868948,4.76835251475036,6.97133607215819,7.08909730437971,5.25025539730368,6.47757856567499,6.55370203389463,5.06780979846713,5.29165129021812,6.54510652216786,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0,4.51801474093653,1.38097570952153,3.43737308063638,2.06223818812425,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,1.55328093525546,0.726511433089237,0.399024873401031,1.02440163452481,1.94485373654635,0.209613162627982,1.2869045591501,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.38581844092741,0,0.735994600671987,1.71434626192708,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,1.09998990259179,0.73171189149109,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.464810523557898,1.15743966588685,0.999242311751784,0.935726433781634,1.28922632428979,2.10417165275728,1.10295709559758,1.15933917810211 | |phase1_expression=3.84357233051505,0,0.454999239389536,0,0,0.839396359559449,0,7.48915275961142,22.9485617107217,25.7470978954193,0.856089841127525,0.717949430958028,2.22560948910567,4.02133851127388,1.99865857089398,3.84703008040669,4.19737126876888,3.47008381894061,4.38766187538364,2.97072756258621,0.595303031057488,8.53902180327614,12.27639008953,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0,0.443461021310609,5.71527606113668,8.61090702618398,0,0.577703239502549,0,0,2.09265815368454,9.37602413428561,4.18818995179039,0.588231488031014,2.04913645487534,4.36959317728038,1.00717454380462,0.709638518536602,0.367093504323363,3.9119567217402,0.218025156380447,1.97717564461025,1.94429899074283,1.81982348112971,4.31257693094915,8.05356509077134,6.5282592781021,6.04968838456435,0,0,0,3.23706337375356,4.7609188134483,0.633831403506179,1.69422266034566,1.77858959222228,3.1496490104849,1.97773272513395,2.1314403448383,0.898800331555214,4.2264013585371,0.933206510776299,1.62007125998029,2.3135745748652,2.57085885963423,2.87129103237098,1.22490799214954,1.62937300731002,0.919218786610021,0,1.27687338085188,0.614426133024974,1.97829431595291,3.29355516968675,1.56274011167028,1.3959149950069,0.56276261003168,1.83357897332172,2.94628585473668,2.27794689278565,1.1183966749518,0.530083353332288,0.377857800533928,1.15945795480671,0,0,0,1.29955283489534,0,0.702222100658759,1.02258193546835,1.81850203222008,1.41335829804136,1.54927761754349,0,2.54805239706646,0,0.649473123033642,0.253359865475099,1.01104889002957,0.5709193985953,0.776813650941515,1.03909497345377,1.38788261412909,0.304465478312141,1.15307748628029,0.904335843315735,1.41106448562846,1.13099932196708,0.494389935468748,0.144599356919912,5.30766331169925,0.647067399789637,1.98757366614354,0.969750506270444,0,1.17112318804619,0.209446706813455,1.27728527604296,20.967646788536,20.9965955847693,19.0605340609597,1.49790639404823,0.915001205637253,2.76439574648302,0.521472960576829,1.27857728665165,1.66230435647648,2.43361894601636,1.32391173005411,2.36373244159177,2.27450482590307,0.631325567659422,1.04096354370163,2.06911893990126,1.0803727788321,0.90422890701429,1.36072998302656,0.640568601424249,2.52994656311268,1.81092359517311,1.29340795759705,0.189106080167819,0,1.53437012699302,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,4.91549231119264,8.23513302767089,10.5140494776369,0,0.234526059981096,0.720248245844059,0.710234206755631,0.393528463494808,0.308534225774757,0,0.536546802799238,0.350296027101508,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,1.9551876352064,0,0.528901133327089,1.49301775374664,0.928946687441754,1.28867461322093,0,0.667134131534611,0,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.974820435595601,0,0.432276099749388,0.597423819763102,1.89667900953082,0.571242563048644,1.1270773567308,0,0.581857461502877,1.1221731182451,0.822074982615345,1.32849133181642,0.627994911365499,1.48076596706161,0.592905254174298,1.33476084572875,2.35870794135844,1.79889689907883,1.21716072833102,1.68824011826692,2.29163266603278,1.72617682470486,2.43202840162553,2.74561413188081,0,0,0.624075346229121,0.757736633841335,0.179397413521912,0.482443521363367,0.554259570499814,1.51593129416388,0.162964976442026,0.509235257325564,1.64283173801951,1.34005005953453,0.238043640886014,0.975668239288994,0.472905432318573,1.10732344824387,0.956728611944923,1.63863314715738,0.518054945597687,0.433947175744535,3.01582567878545,3.26343410291226,0,0,0.481651769963376,0.937693492737625,0.819674726883377,1.26235463602186,0.631016438832513,0.390438744296638,0.861693590931196,1.19484398976276,0.445597348164788,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,1.28528526568723,0.425820255624806,0.712262414669021,1.79175655288934,0.494910368917606,0,0.728341908464944,1.209294227859,0.565815239267694,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,2.38307724027652,1.08036656418786,1.68166288917581,2.14337035031592,4.43350584105684,4.99432689285798,4.44282355625727,7.30715877875038,0.469343416127421,0,0,0.8244312647074,0.484393280087717,0.663442174209714,0.596861720015682,0.328281799490123,0.874442509889552,0.927126510052548,2.73393409276564,1.65109494370578,1.66675074632741,1.88368457004691,1.91371918809435,2.74533807847827,26.6866135090353,25.1912614182584,24.7377953109919,0,0.474503990371703,0.203319467126849,0.86404272657441,0.209088296014469,0.655087691238533,0.539457385539283,0.330613822901344,0.26175594198403,0.518459893167171,1.86401793926078,0.56369293868419,0.149516546043979,0.330916980914195,0.777804753376191,0.258319646955462,0.337912250981556,0.352071715937262,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,1.89606672376907,5.47358081283443,4.21114924375792,5.58659538804519,5.01274747868948,4.76835251475036,6.97133607215819,7.08909730437971,5.25025539730368,6.47757856567499,6.55370203389463,5.06780979846713,5.29165129021812,6.54510652216786,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0,4.51801474093653,1.38097570952153,3.43737308063638,2.06223818812425,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,1.55328093525546,0.726511433089237,0.399024873401031,1.02440163452481,1.94485373654635,0.209613162627982,1.2869045591501,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.38581844092741,0,0.735994600671987,1.71434626192708,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,1.09998990259179,0.73171189149109,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.464810523557898,1.15743966588685,0.999242311751784,0.935726433781634,1.28922632428979,2.10417165275728,1.10295709559758,1.15933917810211 | ||
|short_description=p2@B9d2 | |short_description=p2@B9d2 | ||
}} | }} |
Latest revision as of 10:51, 26 September 2015
Short description: | p2@B9d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B9d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:433 |
Association with transcript: | 62bp_to_uc009fto.1_5end |
EntrezGene: | B9d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.51e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.51e-14 | 32 |
hematopoietic stem cell | 3.51e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.51e-14 | 32 |
motile cell | 5.00e-13 | 54 |
connective tissue cell | 5.88e-13 | 46 |
mesenchymal cell | 5.88e-13 | 46 |
stem cell | 1.07e-10 | 97 |
somatic stem cell | 4.63e-10 | 91 |
multi fate stem cell | 4.63e-10 | 91 |
hematopoietic lineage restricted progenitor cell | 7.43e-10 | 25 |
common myeloid progenitor | 2.70e-09 | 19 |
myeloid cell | 4.16e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-17 | 45 |
blood island | 2.73e-17 | 45 |
hemolymphoid system | 4.48e-15 | 48 |
immune system | 4.48e-15 | 48 |
connective tissue | 5.88e-13 | 46 |
hemopoietic organ | 1.56e-10 | 29 |
immune organ | 1.56e-10 | 29 |
gland of gut | 3.93e-09 | 24 |
thymus | 6.66e-09 | 23 |
neck | 6.66e-09 | 23 |
respiratory system epithelium | 6.66e-09 | 23 |
hemolymphoid system gland | 6.66e-09 | 23 |
pharyngeal epithelium | 6.66e-09 | 23 |
thymic region | 6.66e-09 | 23 |
pharyngeal gland | 6.66e-09 | 23 |
entire pharyngeal arch endoderm | 6.66e-09 | 23 |
thymus primordium | 6.66e-09 | 23 |
early pharyngeal endoderm | 6.66e-09 | 23 |
pharynx | 3.50e-08 | 24 |
upper respiratory tract | 3.50e-08 | 24 |
chordate pharynx | 3.50e-08 | 24 |
pharyngeal arch system | 3.50e-08 | 24 |
pharyngeal region of foregut | 3.50e-08 | 24 |
craniocervical region | 4.28e-08 | 36 |
endocrine gland | 9.30e-08 | 60 |
bone marrow | 1.19e-07 | 16 |
bone element | 1.42e-07 | 22 |
skeletal element | 1.42e-07 | 22 |
skeletal system | 1.42e-07 | 22 |
mixed endoderm/mesoderm-derived structure | 1.73e-07 | 35 |
segment of respiratory tract | 7.62e-07 | 27 |