FFCP PHASE1:Mm9::chr14:76956714..76956725,-: Difference between revisions
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{{FFCP|EntrezGene=72661|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-18bp_to_NR_027699,uc007urn.2,uc011zos.1_5end|description=CAGE_peak_2_at_Serp2_5end|id=chr14:76956714..76956725,-|ontology_enrichment_celltype=CL:0000117!8.29e-15!23;CL:0000337!8.29e-15!23;CL:0002319!6.00e-10!43;CL:0000221!6.56e-10!44;CL:0000133!6.56e-10!44;CL:0000540!2.16e-09!33;CL:0000047!2.16e-09!33;CL:0000031!2.16e-09!33;CL:0000404!2.16e-09!33;CL:0000055!8.20e-08!50;CL:0000393!1.87e-07!39;CL:0000211!1.87e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-27,23;CL:0000337,2.01e-27,23;CL:0000540,1.02e-17,33;CL:0000047,1.02e-17,33;CL:0000031,1.02e-17,33;CL:0000404,1.02e-17,33;CL:0000393,2.71e-14,39;CL:0000211,2.71e-14,39;CL:0002319,4.90e-14,43;CL:0000221,1.31e-13,44;CL:0000133,1.31e-13,44;CL:0002614,6.83e-08,3;CL:0002612,1.20e-07,3;CL:0002610,2.08e-07,3;CL:0002321,7.04e-07,70;CL:0000120,8.47e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.78e-26!52;UBERON:0005068!1.78e-26!52;UBERON:0006241!1.78e-26!52;UBERON:0007135!1.78e-26!52;UBERON:0001017!1.05e-25!73;UBERON:0005743!1.05e-25!73;UBERON:0000073!1.75e-25!75;UBERON:0001016!1.75e-25!75;UBERON:0000955!1.21e-24!50;UBERON:0006238!1.21e-24!50;UBERON:0002616!5.00e-24!49;UBERON:0002346!1.18e-22!71;UBERON:0003075!1.18e-22!71;UBERON:0007284!1.18e-22!71;UBERON:0000033!1.19e-22!63;UBERON:0002020!3.39e-21!34;UBERON:0004121!1.13e-20!102;UBERON:0000924!1.13e-20!102;UBERON:0006601!1.13e-20!102;UBERON:0003080!2.40e-18!40;UBERON:0002780!1.22e-17!39;UBERON:0001890!1.22e-17!39;UBERON:0006240!1.22e-17!39;UBERON:0002791!3.10e-17!29;UBERON:0003528!3.10e-17!29;UBERON:0001893!3.10e-17!29;UBERON:0003056!5.82e-17!49;UBERON:0000956!7.62e-12!21;UBERON:0001869!7.62e-12!21;UBERON:0000203!7.62e-12!21;UBERON:0007811!1.18e-11!86;UBERON:0000153!5.83e-11!94;UBERON:0002619!9.74e-11!17;UBERON:0002021!7.07e-09!10;UBERON:0000411!7.07e-09!10;UBERON:0001950!7.07e-09!10;UBERON:0003076!9.62e-09!12;UBERON:0003057!9.62e-09!12;UBERON:0000025!2.62e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.75e-46,54;UBERON:0001017,5.07e-45,73;UBERON:0001016,1.35e-43,75;UBERON:0001049,8.73e-42,52;UBERON:0005068,8.73e-42,52;UBERON:0006241,8.73e-42,52;UBERON:0007135,8.73e-42,52;UBERON:0002020,1.83e-39,34;UBERON:0004121,1.23e-32,95;UBERON:0000924,1.23e-32,95;UBERON:0006601,1.23e-32,95;UBERON:0002346,1.79e-32,64;UBERON:0003075,1.79e-32,64;UBERON:0007284,1.79e-32,64;UBERON:0000955,5.13e-32,47;UBERON:0006238,5.13e-32,47;UBERON:0002616,1.43e-30,46;UBERON:0003528,3.10e-29,29;UBERON:0002791,3.10e-29,29;UBERON:0001893,3.10e-29,29;UBERON:0010371,1.69e-27,73;UBERON:0003080,2.52e-26,40;UBERON:0002780,1.13e-24,39;UBERON:0001890,1.13e-24,39;UBERON:0006240,1.13e-24,39;UBERON:0002021,3.90e-22,10;UBERON:0000411,3.90e-22,10;UBERON:0001950,3.90e-22,10;UBERON:0003056,2.26e-20,49;UBERON:0010314,3.48e-20,92;UBERON:0002619,4.43e-17,17;UBERON:0003076,5.39e-16,12;UBERON:0003057,5.39e-16,12;UBERON:0002420,5.69e-16,8;UBERON:0007245,5.69e-16,8;UBERON:0010009,5.69e-16,8;UBERON:0010011,5.69e-16,8;UBERON:0000454,5.69e-16,8;UBERON:0000956,9.98e-16,21;UBERON:0001869,9.98e-16,21;UBERON:0000203,9.98e-16,21;UBERON:0000025,9.21e-15,114;UBERON:0002240,1.47e-13,6;UBERON:0005174,1.47e-13,6;UBERON:0001137,1.47e-13,6;UBERON:0004111,2.82e-13,122;UBERON:0001948,5.55e-12,5;UBERON:0002315,5.55e-12,5;UBERON:0011216,1.50e-11,194;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0000369,1.00e-09,5;UBERON:0002435,1.00e-09,5;UBERON:0000204,1.00e-09,5;UBERON:0010082,1.00e-09,5;UBERON:0002038,6.83e-08,3;UBERON:0009663,6.83e-08,3;UBERON:0009661,6.83e-08,3;UBERON:0000125,6.83e-08,3;UBERON:0002308,6.83e-08,3;UBERON:0002257,1.20e-07,3;UBERON:0004684,2.08e-07,3;UBERON:0002275,2.08e-07,3;UBERON:0000483,5.75e-07,174;UBERON:0000119,8.45e-07,176|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,4.23192783417626,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,0.103689612308478,0.675029691658453,0.420649922702764,7.9982275633065,6.84692476950002,0.979926393719632,0.287536413054709,1.83843757322004,5.50579404996943,4.46905683298157,4.76180253094355,2.2420668914133,3.47653045689157,3.12548022334056,8.37548997004143,9.00420176050688,3.36156145108982,7.95497180778903,6.26435395516053,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,2.92780797011547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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72661 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_NR_027699,uc007urn.2,uc011zos.1_5end | |||
|cluster_id=chr14:76956714..76956725,- | |||
|description=CAGE_peak_2_at_Serp2_5end | |||
|id=chr14:76956714..76956725,- | |||
|ontology_enrichment_celltype=CL:0000117!8.29e-15!23;CL:0000337!8.29e-15!23;CL:0002319!6.00e-10!43;CL:0000221!6.56e-10!44;CL:0000133!6.56e-10!44;CL:0000540!2.16e-09!33;CL:0000047!2.16e-09!33;CL:0000031!2.16e-09!33;CL:0000404!2.16e-09!33;CL:0000055!8.20e-08!50;CL:0000393!1.87e-07!39;CL:0000211!1.87e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-27,23;CL:0000337,2.01e-27,23;CL:0000540,1.02e-17,33;CL:0000047,1.02e-17,33;CL:0000031,1.02e-17,33;CL:0000404,1.02e-17,33;CL:0000393,2.71e-14,39;CL:0000211,2.71e-14,39;CL:0002319,4.90e-14,43;CL:0000221,1.31e-13,44;CL:0000133,1.31e-13,44;CL:0002614,6.83e-08,3;CL:0002612,1.20e-07,3;CL:0002610,2.08e-07,3;CL:0002321,7.04e-07,70;CL:0000120,8.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-26!52;UBERON:0005068!1.78e-26!52;UBERON:0006241!1.78e-26!52;UBERON:0007135!1.78e-26!52;UBERON:0001017!1.05e-25!73;UBERON:0005743!1.05e-25!73;UBERON:0000073!1.75e-25!75;UBERON:0001016!1.75e-25!75;UBERON:0000955!1.21e-24!50;UBERON:0006238!1.21e-24!50;UBERON:0002616!5.00e-24!49;UBERON:0002346!1.18e-22!71;UBERON:0003075!1.18e-22!71;UBERON:0007284!1.18e-22!71;UBERON:0000033!1.19e-22!63;UBERON:0002020!3.39e-21!34;UBERON:0004121!1.13e-20!102;UBERON:0000924!1.13e-20!102;UBERON:0006601!1.13e-20!102;UBERON:0003080!2.40e-18!40;UBERON:0002780!1.22e-17!39;UBERON:0001890!1.22e-17!39;UBERON:0006240!1.22e-17!39;UBERON:0002791!3.10e-17!29;UBERON:0003528!3.10e-17!29;UBERON:0001893!3.10e-17!29;UBERON:0003056!5.82e-17!49;UBERON:0000956!7.62e-12!21;UBERON:0001869!7.62e-12!21;UBERON:0000203!7.62e-12!21;UBERON:0007811!1.18e-11!86;UBERON:0000153!5.83e-11!94;UBERON:0002619!9.74e-11!17;UBERON:0002021!7.07e-09!10;UBERON:0000411!7.07e-09!10;UBERON:0001950!7.07e-09!10;UBERON:0003076!9.62e-09!12;UBERON:0003057!9.62e-09!12;UBERON:0000025!2.62e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.75e-46,54;UBERON:0001017,5.07e-45,73;UBERON:0001016,1.35e-43,75;UBERON:0001049,8.73e-42,52;UBERON:0005068,8.73e-42,52;UBERON:0006241,8.73e-42,52;UBERON:0007135,8.73e-42,52;UBERON:0002020,1.83e-39,34;UBERON:0004121,1.23e-32,95;UBERON:0000924,1.23e-32,95;UBERON:0006601,1.23e-32,95;UBERON:0002346,1.79e-32,64;UBERON:0003075,1.79e-32,64;UBERON:0007284,1.79e-32,64;UBERON:0000955,5.13e-32,47;UBERON:0006238,5.13e-32,47;UBERON:0002616,1.43e-30,46;UBERON:0003528,3.10e-29,29;UBERON:0002791,3.10e-29,29;UBERON:0001893,3.10e-29,29;UBERON:0010371,1.69e-27,73;UBERON:0003080,2.52e-26,40;UBERON:0002780,1.13e-24,39;UBERON:0001890,1.13e-24,39;UBERON:0006240,1.13e-24,39;UBERON:0002021,3.90e-22,10;UBERON:0000411,3.90e-22,10;UBERON:0001950,3.90e-22,10;UBERON:0003056,2.26e-20,49;UBERON:0010314,3.48e-20,92;UBERON:0002619,4.43e-17,17;UBERON:0003076,5.39e-16,12;UBERON:0003057,5.39e-16,12;UBERON:0002420,5.69e-16,8;UBERON:0007245,5.69e-16,8;UBERON:0010009,5.69e-16,8;UBERON:0010011,5.69e-16,8;UBERON:0000454,5.69e-16,8;UBERON:0000956,9.98e-16,21;UBERON:0001869,9.98e-16,21;UBERON:0000203,9.98e-16,21;UBERON:0000025,9.21e-15,114;UBERON:0002240,1.47e-13,6;UBERON:0005174,1.47e-13,6;UBERON:0001137,1.47e-13,6;UBERON:0004111,2.82e-13,122;UBERON:0001948,5.55e-12,5;UBERON:0002315,5.55e-12,5;UBERON:0011216,1.50e-11,194;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0000369,1.00e-09,5;UBERON:0002435,1.00e-09,5;UBERON:0000204,1.00e-09,5;UBERON:0010082,1.00e-09,5;UBERON:0002038,6.83e-08,3;UBERON:0009663,6.83e-08,3;UBERON:0009661,6.83e-08,3;UBERON:0000125,6.83e-08,3;UBERON:0002308,6.83e-08,3;UBERON:0002257,1.20e-07,3;UBERON:0004684,2.08e-07,3;UBERON:0002275,2.08e-07,3;UBERON:0000483,5.75e-07,174;UBERON:0000119,8.45e-07,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,4.23192783417626,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,0.103689612308478,0.675029691658453,0.420649922702764,7.9982275633065,6.84692476950002,0.979926393719632,0.287536413054709,1.83843757322004,5.50579404996943,4.46905683298157,4.76180253094355,2.2420668914133,3.47653045689157,3.12548022334056,8.37548997004143,9.00420176050688,3.36156145108982,7.95497180778903,6.26435395516053,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,2.92780797011547,1.04723353406728,0.255457055208591,0,0,0,4.34392854273986,2.74500361691176,1.25654352112864,4.69325664519146,2.04572365864264,2.90903262383384,2.27137768294861,0.203678727700633,0.124406970610093,0,0,0,0,0,0.30140963567143,0.476255494059295,0.512454881139399,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,3.15434922846191,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0,0.648414149624083,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,1.28528526568723,0,0,0,0.329940245945071,0,0.728341908464944,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.891844088010353,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.648074866458964,0,0.56369293868419,0,0,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0.443971906748129,0.269141569828427,0.167884616364078,0,0,0,0,0,4.51801474093653,6.44455331110048,3.43737308063638,7.38968684077857,7.53590771747707,6.0431511791176,8.10027000278167,5.85417564191487,6.79713613476307,6.73088405277366,0.31136204275253,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.384150914429216,0.34461281373368,0.952587382566147,0.695305955669133,0,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0,0.470546902076653,0.169229215783353,0.365855945745545,0,0.407412341537585,0.561142271657738,0.237270036248348,0.689531376628944,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Serp2 | |||
}} |
Latest revision as of 10:20, 26 September 2015
Short description: | p2@Serp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Serp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -18bp_to_NR_027699, uc007urn.2, uc011zos.1_5end |
EntrezGene: | Serp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.01e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-27 | 23 |
neuron | 1.02e-17 | 33 |
neuronal stem cell | 1.02e-17 | 33 |
neuroblast | 1.02e-17 | 33 |
electrically signaling cell | 1.02e-17 | 33 |
electrically responsive cell | 2.71e-14 | 39 |
electrically active cell | 2.71e-14 | 39 |
neural cell | 4.90e-14 | 43 |
ectodermal cell | 1.31e-13 | 44 |
neurectodermal cell | 1.31e-13 | 44 |
neuron of the substantia nigra | 6.83e-08 | 3 |
neuron of the ventral spinal cord | 1.20e-07 | 3 |
raphe nuclei neuron | 2.08e-07 | 3 |
embryonic cell | 7.04e-07 | 70 |
granule cell | 8.47e-07 | 3 |