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FFCP PHASE1:Mm9::chr1:13658820..13658853,+: Difference between revisions

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{{FFCP|EntrezGene=381246|HGNC=|MCL_coexpression_id=369|UniProt=Q5GH62|association_with_transcript=0bp_to_ENSMUST00000088542,NM_001011873,uc007aiv.1_5end|description=CAGE_peak_1_at_Xkr9_5end|id=chr1:13658820..13658853,+|ontology_enrichment_celltype=CL:0000066!1.74e-07!25;CL:0002563!5.55e-07!9;CL:0002251!5.55e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-08,25;CL:0000239,9.55e-08,6;CL:0000677,9.55e-08,6;CL:0000584,9.55e-08,6;CL:0002563,2.68e-07,9;CL:0002251,2.68e-07,9;CL:0000223,6.05e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.41e-16!59;UBERON:0000160!3.98e-16!43;UBERON:0001007!5.34e-15!128;UBERON:0001555!5.34e-15!128;UBERON:0007026!5.34e-15!128;UBERON:0004119!5.40e-15!130;UBERON:0000925!5.40e-15!130;UBERON:0006595!5.40e-15!130;UBERON:0004921!1.06e-13!126;UBERON:0004185!1.06e-13!126;UBERON:0000344!2.24e-12!15;UBERON:0009854!3.41e-11!23;UBERON:0009856!3.41e-11!23;UBERON:0002107!1.23e-10!22;UBERON:0007499!1.23e-10!22;UBERON:0006925!1.23e-10!22;UBERON:0009497!1.23e-10!22;UBERON:0000015!1.23e-10!22;UBERON:0002423!1.23e-10!22;UBERON:0006235!1.23e-10!22;UBERON:0008835!1.23e-10!22;UBERON:0003894!1.23e-10!22;UBERON:0004161!1.23e-10!22;UBERON:0008836!1.23e-10!22;UBERON:0001242!1.32e-10!13;UBERON:0000060!1.32e-10!13;UBERON:0001262!1.32e-10!13;UBERON:0004786!1.32e-10!13;UBERON:0002365!2.20e-09!25;UBERON:0002330!2.20e-09!25;UBERON:0004923!1.09e-08!24;UBERON:0003929!3.81e-07!55;UBERON:0003350!5.55e-07!9;UBERON:0004808!5.55e-07!9;UBERON:0001277!5.55e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-24,31;UBERON:0005409,3.49e-21,47;UBERON:0001007,2.82e-17,116;UBERON:0001555,2.82e-17,116;UBERON:0007026,2.82e-17,116;UBERON:0004119,1.11e-16,118;UBERON:0000925,1.11e-16,118;UBERON:0006595,1.11e-16,118;UBERON:0004921,1.15e-15,114;UBERON:0000344,4.48e-14,15;UBERON:0009854,2.91e-13,23;UBERON:0009856,2.91e-13,23;UBERON:0002107,1.50e-12,22;UBERON:0007499,1.50e-12,22;UBERON:0006925,1.50e-12,22;UBERON:0009497,1.50e-12,22;UBERON:0000015,1.50e-12,22;UBERON:0002423,1.50e-12,22;UBERON:0006235,1.50e-12,22;UBERON:0008835,1.50e-12,22;UBERON:0003894,1.50e-12,22;UBERON:0004161,1.50e-12,22;UBERON:0008836,1.50e-12,22;UBERON:0001242,7.79e-12,13;UBERON:0001262,7.79e-12,13;UBERON:0004786,7.79e-12,13;UBERON:0002365,2.33e-10,25;UBERON:0002330,2.33e-10,25;UBERON:0004923,3.83e-08,24;UBERON:0003929,1.46e-07,55;UBERON:0003350,2.68e-07,9;UBERON:0004808,2.68e-07,9;UBERON:0001277,2.68e-07,9|phase1_expression=0.480446541314382,26.5221309805914,25.9349566452036,45.6720959073313,41.0734498556005,13.0945832091274,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,27.1987118748791,30.2820251008664,33.3054539186712,29.2918157388171,23.7018355954478,41.4251054414895,48.6418150436666,26.164200257326,0,0,0,0.288851619751275,1.82858109894342,1.02084678131185,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,21.5105969245347,8.83962733820076,23.746940432064,33.7883737072788,23.2973981290615,8.28622078777336,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,27.3339049073193,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6819301089348,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9194671836993,16.9248362664668,0,0,2.70621668776396,7.05892336181699,13.3426826306922,13.1255682017666,22.7773949541366,17.7874871101932,19.1014758688205,16.5133871794155,16.7669114922443,23.3693046250098,14.0489732418551,22.5029638777435,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,23.4197575398848,0,0,0,0.811440485554012,3.61765739628625,6.11102044275408,6.32931502391783,2.7562988551756,3.56929837144506,11.5014565221884,11.1642284300551,9.67316786655138,16.4176270665623,23.8598559984143,16.8855232477179,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943025398779491,0,2.15204603560749,7.23599220871019,0.727067458955011,1.42598951353889,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,1.10264199027481,0.32977250588296,0,0,0,0,13.699599321603,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,5.72802370809068,0,0,0.972048067396211,1.04544148007234,2.83871332870031,1.21377911746339,3.30613822901344,6.80565449158477,3.24037433229482,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,1.9318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,1.33348036680969,2.26638562962784,1.92551525755089,1.01078884705519,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.89537047553524,1.42888107384922,1.97003354106254,0.77163688185482,0.412085900803307,1.61918812147837,1.02860775715625,1.4198064492747,0.953744759789284,1.0174249164263,1.50575008664529,1.01537529470012,2.19513567447327,1.8414879800649,2.17286582153379,1.68342681497322,1.18635018124174,1.37906275325789,1.63692417267876,1.08455788830176,0.578719832943424,0,1.63752125911786,1.71896843238639,0,0.220591419119515,0|short_description=p1@Xkr9}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381246
|HGNC=
|MCL_coexpression_id=369
|TSSclassifier=NA
|UniProt=Q5GH62
|association_with_transcript=0bp_to_ENSMUST00000088542,NM_001011873,uc007aiv.1_5end
|cluster_id=chr1:13658820..13658853,+
|description=CAGE_peak_1_at_Xkr9_5end
|id=chr1:13658820..13658853,+
|ontology_enrichment_celltype=CL:0000066!1.74e-07!25;CL:0002563!5.55e-07!9;CL:0002251!5.55e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-08,25;CL:0000239,9.55e-08,6;CL:0000677,9.55e-08,6;CL:0000584,9.55e-08,6;CL:0002563,2.68e-07,9;CL:0002251,2.68e-07,9;CL:0000223,6.05e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.41e-16!59;UBERON:0000160!3.98e-16!43;UBERON:0001007!5.34e-15!128;UBERON:0001555!5.34e-15!128;UBERON:0007026!5.34e-15!128;UBERON:0004119!5.40e-15!130;UBERON:0000925!5.40e-15!130;UBERON:0006595!5.40e-15!130;UBERON:0004921!1.06e-13!126;UBERON:0004185!1.06e-13!126;UBERON:0000344!2.24e-12!15;UBERON:0009854!3.41e-11!23;UBERON:0009856!3.41e-11!23;UBERON:0002107!1.23e-10!22;UBERON:0007499!1.23e-10!22;UBERON:0006925!1.23e-10!22;UBERON:0009497!1.23e-10!22;UBERON:0000015!1.23e-10!22;UBERON:0002423!1.23e-10!22;UBERON:0006235!1.23e-10!22;UBERON:0008835!1.23e-10!22;UBERON:0003894!1.23e-10!22;UBERON:0004161!1.23e-10!22;UBERON:0008836!1.23e-10!22;UBERON:0001242!1.32e-10!13;UBERON:0000060!1.32e-10!13;UBERON:0001262!1.32e-10!13;UBERON:0004786!1.32e-10!13;UBERON:0002365!2.20e-09!25;UBERON:0002330!2.20e-09!25;UBERON:0004923!1.09e-08!24;UBERON:0003929!3.81e-07!55;UBERON:0003350!5.55e-07!9;UBERON:0004808!5.55e-07!9;UBERON:0001277!5.55e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-24,31;UBERON:0005409,3.49e-21,47;UBERON:0001007,2.82e-17,116;UBERON:0001555,2.82e-17,116;UBERON:0007026,2.82e-17,116;UBERON:0004119,1.11e-16,118;UBERON:0000925,1.11e-16,118;UBERON:0006595,1.11e-16,118;UBERON:0004921,1.15e-15,114;UBERON:0000344,4.48e-14,15;UBERON:0009854,2.91e-13,23;UBERON:0009856,2.91e-13,23;UBERON:0002107,1.50e-12,22;UBERON:0007499,1.50e-12,22;UBERON:0006925,1.50e-12,22;UBERON:0009497,1.50e-12,22;UBERON:0000015,1.50e-12,22;UBERON:0002423,1.50e-12,22;UBERON:0006235,1.50e-12,22;UBERON:0008835,1.50e-12,22;UBERON:0003894,1.50e-12,22;UBERON:0004161,1.50e-12,22;UBERON:0008836,1.50e-12,22;UBERON:0001242,7.79e-12,13;UBERON:0001262,7.79e-12,13;UBERON:0004786,7.79e-12,13;UBERON:0002365,2.33e-10,25;UBERON:0002330,2.33e-10,25;UBERON:0004923,3.83e-08,24;UBERON:0003929,1.46e-07,55;UBERON:0003350,2.68e-07,9;UBERON:0004808,2.68e-07,9;UBERON:0001277,2.68e-07,9
|phase1_expression=0.480446541314382,26.5221309805914,25.9349566452036,45.6720959073313,41.0734498556005,13.0945832091274,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,27.1987118748791,30.2820251008664,33.3054539186712,29.2918157388171,23.7018355954478,41.4251054414895,48.6418150436666,26.164200257326,0,0,0,0.288851619751275,1.82858109894342,1.02084678131185,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,21.5105969245347,8.83962733820076,23.746940432064,33.7883737072788,23.2973981290615,8.28622078777336,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,27.3339049073193,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6819301089348,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9194671836993,16.9248362664668,0,0,2.70621668776396,7.05892336181699,13.3426826306922,13.1255682017666,22.7773949541366,17.7874871101932,19.1014758688205,16.5133871794155,16.7669114922443,23.3693046250098,14.0489732418551,22.5029638777435,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,23.4197575398848,0,0,0,0.811440485554012,3.61765739628625,6.11102044275408,6.32931502391783,2.7562988551756,3.56929837144506,11.5014565221884,11.1642284300551,9.67316786655138,16.4176270665623,23.8598559984143,16.8855232477179,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943025398779491,0,2.15204603560749,7.23599220871019,0.727067458955011,1.42598951353889,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,1.10264199027481,0.32977250588296,0,0,0,0,13.699599321603,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,5.72802370809068,0,0,0.972048067396211,1.04544148007234,2.83871332870031,1.21377911746339,3.30613822901344,6.80565449158477,3.24037433229482,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,1.9318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,1.33348036680969,2.26638562962784,1.92551525755089,1.01078884705519,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.89537047553524,1.42888107384922,1.97003354106254,0.77163688185482,0.412085900803307,1.61918812147837,1.02860775715625,1.4198064492747,0.953744759789284,1.0174249164263,1.50575008664529,1.01537529470012,2.19513567447327,1.8414879800649,2.17286582153379,1.68342681497322,1.18635018124174,1.37906275325789,1.63692417267876,1.08455788830176,0.578719832943424,0,1.63752125911786,1.71896843238639,0,0.220591419119515,0
|short_description=p1@Xkr9
}}

Latest revision as of 10:20, 26 September 2015

Short description:p1@Xkr9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Xkr9_5end
Coexpression cluster:MCL_coexpression_mm9:369
Association with transcript: 0bp_to_ENSMUST00000088542, NM_001011873, uc007aiv.1_5end
EntrezGene:Xkr9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Xkr9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I625.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.28
GP2+ M cell, pool1.CNhs13228.11845-124H933.31
GP2+ M cell, pool2.CNhs13231.11846-124I129.29
GP2+ M cell, pool3.CNhs13240.11847-124I223.70
Ileum epithelium, pool1.CNhs13199.10252-104B941.43
Ileum epithelium, pool2.CNhs13232.10253-104C148.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.70
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I346.92
intestine, adult.CNhs10496.178-9A316.92
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E917.79
intestine, neonate N06.CNhs11102.688-20B819.10
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A516.77
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G122.50
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B223.42
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H123.86
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.90e-0825
brush border epithelial cell9.55e-086
gut absorptive cell9.55e-086
enterocyte9.55e-086
intestinal epithelial cell2.68e-079
epithelial cell of alimentary canal2.68e-079
endodermal cell6.05e-0720

Uber anatomy
Ontology termp-valuen
intestine2.19e-2431
gastrointestinal system3.49e-2147
digestive system2.82e-17116
digestive tract2.82e-17116
primitive gut2.82e-17116
endoderm-derived structure1.11e-16118
endoderm1.11e-16118
presumptive endoderm1.11e-16118
subdivision of digestive tract1.15e-15114
mucosa4.48e-1415
digestive tract diverticulum2.91e-1323
sac2.91e-1323
liver1.50e-1222
epithelial sac1.50e-1222
digestive gland1.50e-1222
epithelium of foregut-midgut junction1.50e-1222
anatomical boundary1.50e-1222
hepatobiliary system1.50e-1222
foregut-midgut junction1.50e-1222
hepatic diverticulum1.50e-1222
liver primordium1.50e-1222
septum transversum1.50e-1222
liver bud1.50e-1222
intestinal mucosa7.79e-1213
wall of intestine7.79e-1213
gastrointestinal system mucosa7.79e-1213
exocrine gland2.33e-1025
exocrine system2.33e-1025
organ component layer3.83e-0824
gut epithelium1.46e-0755
epithelium of mucosa2.68e-079
gastrointestinal system epithelium2.68e-079
intestinal epithelium2.68e-079
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