FFCP PHASE1:Mm9::chr10:80164681..80164731,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208228 | |EntrezGene=208228 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=482 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BSU7 | |UniProt=Q8BSU7 | ||
|association_with_transcript=-116bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end | |association_with_transcript=-116bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end | ||
|cluster_id=chr10:80164681..80164731,- | |||
|description=CAGE_peak_2_at_Mob3a_5end | |description=CAGE_peak_2_at_Mob3a_5end | ||
|id=chr10:80164681..80164731,- | |id=chr10:80164681..80164731,- | ||
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!5.98e-09!33;CL:0000047!5.98e-09!33;CL:0000031!5.98e-09!33;CL:0000404!5.98e-09!33;CL:0000393!1.29e-08!39;CL:0000211!1.29e-08!39;CL:0002319!3.06e-08!43;CL:0000221!4.96e-08!44;CL:0000133!4.96e-08!44;CL:0000055!1.71e-07!50;CL:0000723!3.49e-07!91;CL:0000048!3.49e-07!91;CL:0000034!3.59e-07!97 | |ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!5.98e-09!33;CL:0000047!5.98e-09!33;CL:0000031!5.98e-09!33;CL:0000404!5.98e-09!33;CL:0000393!1.29e-08!39;CL:0000211!1.29e-08!39;CL:0002319!3.06e-08!43;CL:0000221!4.96e-08!44;CL:0000133!4.96e-08!44;CL:0000055!1.71e-07!50;CL:0000723!3.49e-07!91;CL:0000048!3.49e-07!91;CL:0000034!3.59e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.76e-15,23;CL:0000337,8.76e-15,23;CL:0000540,1.89e-10,33;CL:0000047,1.89e-10,33;CL:0000031,1.89e-10,33;CL:0000404,1.89e-10,33;CL:0000723,6.01e-10,91;CL:0000048,6.01e-10,91;CL:0000393,8.78e-10,39;CL:0000211,8.78e-10,39;CL:0002319,1.61e-09,43;CL:0000034,3.49e-09,97;CL:0000221,5.18e-09,44;CL:0000133,5.18e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.92e-09!94;UBERON:0002390!1.20e-08!45;UBERON:0003061!1.20e-08!45;UBERON:0007811!2.38e-08!86;UBERON:0002193!2.67e-08!48;UBERON:0002370!7.83e-08!23;UBERON:0000974!7.83e-08!23;UBERON:0004807!7.83e-08!23;UBERON:0005058!7.83e-08!23;UBERON:0003351!7.83e-08!23;UBERON:0009113!7.83e-08!23;UBERON:0003295!7.83e-08!23;UBERON:0009722!7.83e-08!23;UBERON:0005562!7.83e-08!23;UBERON:0007690!7.83e-08!23;UBERON:0003408!2.11e-07!24;UBERON:0004177!2.19e-07!29;UBERON:0006562!4.50e-07!24;UBERON:0001557!4.50e-07!24;UBERON:0001042!4.50e-07!24;UBERON:0008814!4.50e-07!24;UBERON:0009145!4.50e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.16e-10,45;UBERON:0003061,5.16e-10,45;UBERON:0002370,1.80e-09,23;UBERON:0000974,1.80e-09,23;UBERON:0004807,1.80e-09,23;UBERON:0005058,1.80e-09,23;UBERON:0003351,1.80e-09,23;UBERON:0009113,1.80e-09,23;UBERON:0003295,1.80e-09,23;UBERON:0009722,1.80e-09,23;UBERON:0005562,1.80e-09,23;UBERON:0007690,1.80e-09,23;UBERON:0002193,3.50e-09,48;UBERON:0002405,3.50e-09,48;UBERON:0004177,9.41e-09,29;UBERON:0005057,9.41e-09,29;UBERON:0006562,1.04e-08,24;UBERON:0003408,1.04e-08,24;UBERON:0001557,1.04e-08,24;UBERON:0001042,1.04e-08,24;UBERON:0008814,1.04e-08,24;UBERON:0009145,1.04e-08,24;UBERON:0000153,1.30e-07,43;UBERON:0001017,3.40e-07,73;UBERON:0001016,6.05e-07,75;UBERON:0007811,6.73e-07,36;UBERON:0000072,8.08e-07,27 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,3.22808308603941,1.83025338797167,3.04283884218592,0.856089841127525,1.03703806693937,2.73921167889929,2.71003247498892,1.99865857089398,1.21485160433896,3.49780939064073,2.83915948822414,3.42786084014347,3.39511721438424,0.850432901510698,1.09220046320974,0.261199789138935,0.95995453676044,0.45881856213434,0.57423196411502,0.430761996159075,0.861884930743556,0,0,1.10865255327652,1.90509202037889,2.46025915033828,0,0,0.166234645358492,0.204169356262369,1.25559489221072,2.3440060335714,1.57057123192139,4.70585190424811,3.41522742479223,3.39857247121808,2.7697299954627,1.72340783073175,1.10128051297009,2.34717403304412,1.09012578190223,1.31811709640683,0.194429899074283,0.279972843250725,1.43752564364972,1.34226084846189,2.17608642603403,3.02484419228218,1.02903774414379,0.573066879877513,0.515672092277442,12.9482534950143,11.1088105647127,9.50747105259269,1.69422266034566,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.92109152660777,5.18448061542388,7.42532660824299,8.41299845405528,5.71301968807607,5.30084498283872,8.69684674426174,7.66763768145891,10.1114066527102,3.30347642998166,1.53224805702225,1.22885226604995,13.7161739239402,9.97215315266265,14.0646610050325,3.35019598801657,1.68828783009504,1.22238598221448,7.66034322231536,3.27454865837937,4.28718725398191,0.908714319998209,1.13357340160178,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0,0,0.45673551887624,1.55362730188303,0.29688427812965,1.56136794089522,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.161766849947409,1.54589062922275,0.484875253135222,0,0.292780797011547,0.628340120440365,1.02182822083437,2.87556298814209,0,1.01656181658452,2.24685959107234,0,2.76439574648302,0.521472960576829,0.767146371990992,1.87009240103604,0.648965052271031,0.611036183101898,1.7416975885413,0.505445516867349,0.420883711772948,2.21204753036596,1.60931473103431,2.88099407688559,1.65775299619287,0.95251098811859,1.40925092313335,2.15513966487376,0.517406741478031,3.44908788692548,1.70195472151037,1.58356011747554,1.53437012699302,1.66828349535359,0.348252166522167,1.02891068203972,1.19420560091096,0.702213187313235,1.80143534980301,1.42081749697796,1.44988040774851,0.938104239924385,0,0.473489471170421,0.787056926989615,0.308534225774757,0,0.804820204198858,0.467061369468678,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,4.93942139420565,0.660837565967596,0,1.06644125267617,1.39342003116263,0.644337306610467,0.201683524623343,0.889512175379481,0.380451252225118,0,0.658795818896044,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,0,0.610953983535943,0.775809948670503,0.280543279561274,0.379419222745544,0.590440591918409,0.31399745568275,0,0,3.17005700860579,2.35870794135844,1.79889689907883,1.01430060694251,1.92941727801933,2.03700681425136,2.01387296215567,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0.757736633841335,0.179397413521912,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.938760993154008,1.00503754465089,0.476087281772027,0.975668239288994,0.630540576424764,0,0.478364305972461,0.491589944147214,0.518054945597687,0,1.50791283939272,2.17562273527484,0.491764273019036,0,1.28440471990234,1.75817529888305,1.3114795630134,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,1.33679204449436,1.98153571552183,1.21443210502468,0.292255857911312,1.18586333383957,0.642642632843614,0.567760340833074,1.78065603667255,0.977321756121456,0.329940245945071,0,0.971122544619926,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,1.98067203434441,2.32845630808958,2.35770738534752,1.77340233642274,1.42695054081656,1.64549020602121,1.8267896946876,0.704015124191131,0.63549621259146,0.220528398054962,0.32977250588296,0,0.422190474497091,0.596861720015682,0.656563598980245,0.874442509889552,2.59595422814714,1.70870880797853,0.206386867963223,1.85194527369712,0.753473828018764,1.0935538217682,1.83022538565218,0.849892149969277,3.49878630809145,1.24379976423981,0,0.474503990371703,1.42323626988794,0.648032044930808,0.209088296014469,0.218362563746178,0.539457385539283,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,1.04661582230785,0.66183396182839,0.972255941720238,1.29159823477731,0.337912250981556,0.704143431874524,0.911430693907651,1.04859344425711,1.44950472495604,1.72818003754719,6.32022241256356,1.82452693761148,4.00572732942826,3.63778304337826,8.23522800070415,5.56307793387542,5.64918612743854,5.75989155980851,4.74542314756294,5.48689007915999,5.94874492307359,5.84747284438514,5.58028681513911,6.66198342434943,0.226730383615211,0.665957860122194,0.807424709485281,0.503653849092235,0.19318959403219,0.375364950902364,0.915758121336325,0.214368379079066,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,2.17953429926771,3.59122386060928,1.70733605754134,2.43106717068294,3.35381060204772,2.02227859295016,0.666740183404846,1.85431551515005,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,1.12369808963859,1.92075457214608,1.14870937911227,0.952587382566147,1.50649623728312,0.964546102318525,2.88460130562315,1.17759136107518,1.71434626192708,1.59728225543404,1.1921809497366,1.45346416632329,1.31753132581463,1.35383372626682,1.64635175585495,1.31534855718921,0.814824683075171,1.68342681497322,2.60997039873183,0.985044823755635,1.63692417267876,1.70430525304563,1.54325288784913,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,3.22808308603941,1.83025338797167,3.04283884218592,0.856089841127525,1.03703806693937,2.73921167889929,2.71003247498892,1.99865857089398,1.21485160433896,3.49780939064073,2.83915948822414,3.42786084014347,3.39511721438424,0.850432901510698,1.09220046320974,0.261199789138935,0.95995453676044,0.45881856213434,0.57423196411502,0.430761996159075,0.861884930743556,0,0,1.10865255327652,1.90509202037889,2.46025915033828,0,0,0.166234645358492,0.204169356262369,1.25559489221072,2.3440060335714,1.57057123192139,4.70585190424811,3.41522742479223,3.39857247121808,2.7697299954627,1.72340783073175,1.10128051297009,2.34717403304412,1.09012578190223,1.31811709640683,0.194429899074283,0.279972843250725,1.43752564364972,1.34226084846189,2.17608642603403,3.02484419228218,1.02903774414379,0.573066879877513,0.515672092277442,12.9482534950143,11.1088105647127,9.50747105259269,1.69422266034566,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.92109152660777,5.18448061542388,7.42532660824299,8.41299845405528,5.71301968807607,5.30084498283872,8.69684674426174,7.66763768145891,10.1114066527102,3.30347642998166,1.53224805702225,1.22885226604995,13.7161739239402,9.97215315266265,14.0646610050325,3.35019598801657,1.68828783009504,1.22238598221448,7.66034322231536,3.27454865837937,4.28718725398191,0.908714319998209,1.13357340160178,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0,0,0.45673551887624,1.55362730188303,0.29688427812965,1.56136794089522,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.161766849947409,1.54589062922275,0.484875253135222,0,0.292780797011547,0.628340120440365,1.02182822083437,2.87556298814209,0,1.01656181658452,2.24685959107234,0,2.76439574648302,0.521472960576829,0.767146371990992,1.87009240103604,0.648965052271031,0.611036183101898,1.7416975885413,0.505445516867349,0.420883711772948,2.21204753036596,1.60931473103431,2.88099407688559,1.65775299619287,0.95251098811859,1.40925092313335,2.15513966487376,0.517406741478031,3.44908788692548,1.70195472151037,1.58356011747554,1.53437012699302,1.66828349535359,0.348252166522167,1.02891068203972,1.19420560091096,0.702213187313235,1.80143534980301,1.42081749697796,1.44988040774851,0.938104239924385,0,0.473489471170421,0.787056926989615,0.308534225774757,0,0.804820204198858,0.467061369468678,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,4.93942139420565,0.660837565967596,0,1.06644125267617,1.39342003116263,0.644337306610467,0.201683524623343,0.889512175379481,0.380451252225118,0,0.658795818896044,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,0,0.610953983535943,0.775809948670503,0.280543279561274,0.379419222745544,0.590440591918409,0.31399745568275,0,0,3.17005700860579,2.35870794135844,1.79889689907883,1.01430060694251,1.92941727801933,2.03700681425136,2.01387296215567,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0.757736633841335,0.179397413521912,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.938760993154008,1.00503754465089,0.476087281772027,0.975668239288994,0.630540576424764,0,0.478364305972461,0.491589944147214,0.518054945597687,0,1.50791283939272,2.17562273527484,0.491764273019036,0,1.28440471990234,1.75817529888305,1.3114795630134,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,1.33679204449436,1.98153571552183,1.21443210502468,0.292255857911312,1.18586333383957,0.642642632843614,0.567760340833074,1.78065603667255,0.977321756121456,0.329940245945071,0,0.971122544619926,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,1.98067203434441,2.32845630808958,2.35770738534752,1.77340233642274,1.42695054081656,1.64549020602121,1.8267896946876,0.704015124191131,0.63549621259146,0.220528398054962,0.32977250588296,0,0.422190474497091,0.596861720015682,0.656563598980245,0.874442509889552,2.59595422814714,1.70870880797853,0.206386867963223,1.85194527369712,0.753473828018764,1.0935538217682,1.83022538565218,0.849892149969277,3.49878630809145,1.24379976423981,0,0.474503990371703,1.42323626988794,0.648032044930808,0.209088296014469,0.218362563746178,0.539457385539283,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,1.04661582230785,0.66183396182839,0.972255941720238,1.29159823477731,0.337912250981556,0.704143431874524,0.911430693907651,1.04859344425711,1.44950472495604,1.72818003754719,6.32022241256356,1.82452693761148,4.00572732942826,3.63778304337826,8.23522800070415,5.56307793387542,5.64918612743854,5.75989155980851,4.74542314756294,5.48689007915999,5.94874492307359,5.84747284438514,5.58028681513911,6.66198342434943,0.226730383615211,0.665957860122194,0.807424709485281,0.503653849092235,0.19318959403219,0.375364950902364,0.915758121336325,0.214368379079066,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,2.17953429926771,3.59122386060928,1.70733605754134,2.43106717068294,3.35381060204772,2.02227859295016,0.666740183404846,1.85431551515005,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,1.12369808963859,1.92075457214608,1.14870937911227,0.952587382566147,1.50649623728312,0.964546102318525,2.88460130562315,1.17759136107518,1.71434626192708,1.59728225543404,1.1921809497366,1.45346416632329,1.31753132581463,1.35383372626682,1.64635175585495,1.31534855718921,0.814824683075171,1.68342681497322,2.60997039873183,0.985044823755635,1.63692417267876,1.70430525304563,1.54325288784913,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843 | ||
|short_description=p2@Mob3a | |short_description=p2@Mob3a | ||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p2@Mob3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mob3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:482 |
Association with transcript: | -116bp_to_ENSMUST00000003438, NM_172457, uc007geh.1, uc007gei.1_5end |
EntrezGene: | Mob3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.76e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.76e-15 | 23 |
neuron | 1.89e-10 | 33 |
neuronal stem cell | 1.89e-10 | 33 |
neuroblast | 1.89e-10 | 33 |
electrically signaling cell | 1.89e-10 | 33 |
somatic stem cell | 6.01e-10 | 91 |
multi fate stem cell | 6.01e-10 | 91 |
electrically responsive cell | 8.78e-10 | 39 |
electrically active cell | 8.78e-10 | 39 |
neural cell | 1.61e-09 | 43 |
stem cell | 3.49e-09 | 97 |
ectodermal cell | 5.18e-09 | 44 |
neurectodermal cell | 5.18e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.16e-10 | 45 |
blood island | 5.16e-10 | 45 |
thymus | 1.80e-09 | 23 |
neck | 1.80e-09 | 23 |
respiratory system epithelium | 1.80e-09 | 23 |
hemolymphoid system gland | 1.80e-09 | 23 |
pharyngeal epithelium | 1.80e-09 | 23 |
thymic region | 1.80e-09 | 23 |
pharyngeal gland | 1.80e-09 | 23 |
entire pharyngeal arch endoderm | 1.80e-09 | 23 |
thymus primordium | 1.80e-09 | 23 |
early pharyngeal endoderm | 1.80e-09 | 23 |
hemolymphoid system | 3.50e-09 | 48 |
immune system | 3.50e-09 | 48 |
hemopoietic organ | 9.41e-09 | 29 |
immune organ | 9.41e-09 | 29 |
pharynx | 1.04e-08 | 24 |
gland of gut | 1.04e-08 | 24 |
upper respiratory tract | 1.04e-08 | 24 |
chordate pharynx | 1.04e-08 | 24 |
pharyngeal arch system | 1.04e-08 | 24 |
pharyngeal region of foregut | 1.04e-08 | 24 |
anterior region of body | 1.30e-07 | 43 |
central nervous system | 3.40e-07 | 73 |
nervous system | 6.05e-07 | 75 |
craniocervical region | 6.73e-07 | 36 |
segment of respiratory tract | 8.08e-07 | 27 |