FFCP PHASE1:Mm9::chr2:25097716..25097727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68846 | |EntrezGene=68846 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0W3 | |UniProt=Q8K0W3 | ||
|association_with_transcript=-47bp_to_ENSMUST00000154498_5end | |association_with_transcript=-47bp_to_ENSMUST00000154498_5end | ||
|cluster_id=chr2:25097716..25097727,+ | |||
|description=CAGE_peak_4_at_Rnf208_5end | |description=CAGE_peak_4_at_Rnf208_5end | ||
|id=chr2:25097716..25097727,+ | |id=chr2:25097716..25097727,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.19e-14!23;CL:0000337!1.19e-14!23;CL:0000540!1.77e-12!33;CL:0000047!1.77e-12!33;CL:0000031!1.77e-12!33;CL:0000404!1.77e-12!33;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0002319!4.45e-10!43;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39 | |ontology_enrichment_celltype=CL:0000117!1.19e-14!23;CL:0000337!1.19e-14!23;CL:0000540!1.77e-12!33;CL:0000047!1.77e-12!33;CL:0000031!1.77e-12!33;CL:0000404!1.77e-12!33;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0002319!4.45e-10!43;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-33,23;CL:0000337,1.45e-33,23;CL:0000540,1.42e-21,33;CL:0000047,1.42e-21,33;CL:0000031,1.42e-21,33;CL:0000404,1.42e-21,33;CL:0000221,5.57e-20,44;CL:0000133,5.57e-20,44;CL:0002319,1.00e-18,43;CL:0000393,2.38e-17,39;CL:0000211,2.38e-17,39;CL:0002321,3.70e-10,70;CL:0002609,7.48e-08,6;CL:0002612,4.20e-07,3;CL:0000120,4.80e-07,3;CL:0002613,7.16e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.50e-25,34;UBERON:0001017,7.21e-21,73;UBERON:0001016,4.43e-20,75;UBERON:0000073,3.52e-19,54;UBERON:0001049,2.25e-18,52;UBERON:0005068,2.25e-18,52;UBERON:0006241,2.25e-18,52;UBERON:0007135,2.25e-18,52;UBERON:0003528,8.86e-17,29;UBERON:0002791,8.86e-17,29;UBERON:0001893,8.86e-17,29;UBERON:0004121,2.62e-16,95;UBERON:0000924,2.62e-16,95;UBERON:0006601,2.62e-16,95;UBERON:0002346,7.77e-15,64;UBERON:0003075,7.77e-15,64;UBERON:0007284,7.77e-15,64;UBERON:0010371,2.51e-13,73;UBERON:0002780,1.35e-12,39;UBERON:0001890,1.35e-12,39;UBERON:0006240,1.35e-12,39;UBERON:0002240,2.43e-12,6;UBERON:0005174,2.43e-12,6;UBERON:0001137,2.43e-12,6;UBERON:0003080,3.70e-12,40;UBERON:0002616,4.18e-11,46;UBERON:0001948,5.00e-11,5;UBERON:0002315,5.00e-11,5;UBERON:0002420,8.78e-11,8;UBERON:0007245,8.78e-11,8;UBERON:0010009,8.78e-11,8;UBERON:0010011,8.78e-11,8;UBERON:0000454,8.78e-11,8;UBERON:0000955,9.22e-11,47;UBERON:0006238,9.22e-11,47;UBERON:0003056,4.00e-10,49;UBERON:0010314,4.17e-09,92;UBERON:0000956,1.32e-08,21;UBERON:0001869,1.32e-08,21;UBERON:0000203,1.32e-08,21;UBERON:0003076,2.58e-07,12;UBERON:0003057,2.58e-07,12;UBERON:0002257,4.20e-07,3;UBERON:0000369,7.74e-07,5;UBERON:0002435,7.74e-07,5;UBERON:0000204,7.74e-07,5;UBERON:0010082,7.74e-07,5 | |||
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| ||
|short_description=p4@Rnf208 | |short_description=p4@Rnf208 | ||
}} | }} |
Latest revision as of 10:01, 26 September 2015
Short description: | p4@Rnf208 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rnf208_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -47bp_to_ENSMUST00000154498_5end |
EntrezGene: | Rnf208 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-33 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-33 | 23 |
neuron | 1.42e-21 | 33 |
neuronal stem cell | 1.42e-21 | 33 |
neuroblast | 1.42e-21 | 33 |
electrically signaling cell | 1.42e-21 | 33 |
ectodermal cell | 5.57e-20 | 44 |
neurectodermal cell | 5.57e-20 | 44 |
neural cell | 1.00e-18 | 43 |
electrically responsive cell | 2.38e-17 | 39 |
electrically active cell | 2.38e-17 | 39 |
embryonic cell | 3.70e-10 | 70 |
neuron of cerebral cortex | 7.48e-08 | 6 |
neuron of the ventral spinal cord | 4.20e-07 | 3 |
granule cell | 4.80e-07 | 3 |
striatum neuron | 7.16e-07 | 3 |