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FFCP PHASE1:Mm9::chr7:25266999..25267006,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:25266999..25267006,+
|DHSsupport=NA
|short_description=p2@Cadm4
|DPIdataset=NA
|description=CAGE_peak_2_at_Cadm4_5end
|association_with_transcript=-35bp_to_ENSMUST00000068023,NM_153112,uc009fps.1_5end
|EntrezGene=260299
|EntrezGene=260299
|HGNC=
|HGNC=
|MCL_coexpression_id=747
|TSSclassifier=NA
|UniProt=Q8R464
|UniProt=Q8R464
|association_with_transcript=-35bp_to_ENSMUST00000068023,NM_153112,uc009fps.1_5end
|cluster_id=chr7:25266999..25267006,+
|description=CAGE_peak_2_at_Cadm4_5end
|id=chr7:25266999..25267006,+
|ontology_enrichment_celltype=CL:0000221!8.02e-23!44;CL:0000133!8.02e-23!44;CL:0002319!3.53e-22!43;CL:0000055!3.82e-19!50;CL:0000117!5.26e-18!23;CL:0000337!5.26e-18!23;CL:0000540!2.30e-15!33;CL:0000047!2.30e-15!33;CL:0000031!2.30e-15!33;CL:0000404!2.30e-15!33;CL:0000393!2.50e-13!39;CL:0000211!2.50e-13!39;CL:0002321!3.01e-12!70;CL:0000220!3.01e-12!70;CL:0000333!7.77e-08!10;CL:0000095!7.77e-08!10;CL:0000243!7.77e-08!10;CL:0000123!7.77e-08!10;CL:0000125!7.77e-08!10;CL:0000030!7.77e-08!10;CL:0000339!7.77e-08!10
|ontology_enrichment_celltype_v019_2=CL:0000117,3.17e-32,23;CL:0000337,3.17e-32,23;CL:0002319,5.11e-32,43;CL:0000221,3.43e-31,44;CL:0000133,3.43e-31,44;CL:0000540,1.89e-21,33;CL:0000047,1.89e-21,33;CL:0000031,1.89e-21,33;CL:0000404,1.89e-21,33;CL:0002321,5.82e-18,70;CL:0000393,1.23e-17,39;CL:0000211,1.23e-17,39;CL:0002453,2.03e-14,8;CL:0000333,2.09e-11,10;CL:0000095,2.09e-11,10;CL:0000243,2.09e-11,10;CL:0000123,2.09e-11,10;CL:0000125,2.09e-11,10;CL:0000030,2.09e-11,10;CL:0000339,2.09e-11,10;CL:0002614,7.17e-11,3;CL:0002613,1.10e-09,3;CL:0000128,7.54e-09,6;CL:0000126,7.54e-09,6;CL:0000127,7.54e-09,6;CL:0000878,8.02e-08,2;CL:0000129,8.02e-08,2;CL:0000723,9.98e-08,91;CL:0000048,9.98e-08,91;CL:0002611,1.25e-07,2;CL:0000034,5.08e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.74e-38!75;UBERON:0001016!1.74e-38!75;UBERON:0001017!6.97e-37!73;UBERON:0005743!6.97e-37!73;UBERON:0004121!7.47e-34!102;UBERON:0000924!7.47e-34!102;UBERON:0006601!7.47e-34!102;UBERON:0001049!6.72e-30!52;UBERON:0005068!6.72e-30!52;UBERON:0006241!6.72e-30!52;UBERON:0007135!6.72e-30!52;UBERON:0002346!1.64e-28!71;UBERON:0003075!1.64e-28!71;UBERON:0007284!1.64e-28!71;UBERON:0000955!4.25e-26!50;UBERON:0006238!4.25e-26!50;UBERON:0000033!4.53e-26!63;UBERON:0002616!1.34e-25!49;UBERON:0002020!2.95e-23!34;UBERON:0003056!1.38e-22!49;UBERON:0003080!3.45e-21!40;UBERON:0002780!1.82e-20!39;UBERON:0001890!1.82e-20!39;UBERON:0006240!1.82e-20!39;UBERON:0002791!8.55e-19!29;UBERON:0003528!8.55e-19!29;UBERON:0001893!8.55e-19!29;UBERON:0007811!1.07e-14!86;UBERON:0000153!1.52e-12!94;UBERON:0000956!6.93e-12!21;UBERON:0001869!6.93e-12!21;UBERON:0000203!6.93e-12!21;UBERON:0002619!2.13e-09!17;UBERON:0003076!4.07e-09!12;UBERON:0003057!4.07e-09!12;UBERON:0000025!2.14e-08!114;UBERON:0002420!2.19e-08!8;UBERON:0007245!2.19e-08!8;UBERON:0010009!2.19e-08!8;UBERON:0010011!2.19e-08!8;UBERON:0000454!2.19e-08!8;UBERON:0004111!2.33e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,6.49e-26,54;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002020,1.26e-22,34;UBERON:0001049,6.33e-22,52;UBERON:0005068,6.33e-22,52;UBERON:0006241,6.33e-22,52;UBERON:0007135,6.33e-22,52;UBERON:0002420,1.08e-18,8;UBERON:0007245,1.08e-18,8;UBERON:0010009,1.08e-18,8;UBERON:0010011,1.08e-18,8;UBERON:0000454,1.08e-18,8;UBERON:0002346,5.06e-17,64;UBERON:0003075,5.06e-17,64;UBERON:0007284,5.06e-17,64;UBERON:0002616,1.27e-15,46;UBERON:0000955,3.24e-15,47;UBERON:0006238,3.24e-15,47;UBERON:0003528,4.78e-15,29;UBERON:0002791,4.78e-15,29;UBERON:0001893,4.78e-15,29;UBERON:0010371,2.12e-14,73;UBERON:0002780,2.54e-12,39;UBERON:0001890,2.54e-12,39;UBERON:0006240,2.54e-12,39;UBERON:0003076,2.81e-12,12;UBERON:0003057,2.81e-12,12;UBERON:0003080,6.04e-12,40;UBERON:0002038,7.17e-11,3;UBERON:0009663,7.17e-11,3;UBERON:0009661,7.17e-11,3;UBERON:0000125,7.17e-11,3;UBERON:0002308,7.17e-11,3;UBERON:0001948,1.46e-10,5;UBERON:0002315,1.46e-10,5;UBERON:0010314,1.50e-10,92;UBERON:0000369,7.75e-10,5;UBERON:0002435,7.75e-10,5;UBERON:0000204,7.75e-10,5;UBERON:0010082,7.75e-10,5;UBERON:0003056,3.01e-09,49;UBERON:0002240,8.28e-09,6;UBERON:0005174,8.28e-09,6;UBERON:0001137,8.28e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0002950,3.01e-08,4;UBERON:0001891,3.01e-08,4;UBERON:0009616,3.01e-08,4;UBERON:0010286,3.01e-08,4;UBERON:0000025,1.07e-07,114;UBERON:0002256,1.25e-07,2;UBERON:0004111,6.48e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0.515672092277442,1.61853168687678,0.528990979272033,3.1691570175309,0.338844532069132,0,0,0,0,2.09720077362883,6.91592949578798,0.829516898467821,1.08004750665353,0.210324961351382,3.99911378165325,1.98781686856452,0.489963196859816,1.24599112323707,0.919218786610021,0,2.29837208553338,1.99688493233117,1.45074916503213,1.28082701043374,2.08365348222704,4.4669279840221,2.8138130501584,2.13917546887534,0.589257170947335,1.85083185038834,1.86399445825301,0.984440513331393,0.453429360640713,0,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,1.04294592115366,0.767146371990992,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0.540186389416048,0.30140963567143,0,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.532020700926821,0,0.493647061806363,0.608929898229199,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0.515672092277442,1.61853168687678,0.528990979272033,3.1691570175309,0.338844532069132,0,0,0,0,2.09720077362883,6.91592949578798,0.829516898467821,1.08004750665353,0.210324961351382,3.99911378165325,1.98781686856452,0.489963196859816,1.24599112323707,0.919218786610021,0,2.29837208553338,1.99688493233117,1.45074916503213,1.28082701043374,2.08365348222704,4.4669279840221,2.8138130501584,2.13917546887534,0.589257170947335,1.85083185038834,1.86399445825301,0.984440513331393,0.453429360640713,0,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,1.04294592115366,0.767146371990992,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0.540186389416048,0.30140963567143,0,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.532020700926821,0,0.493647061806363,0.608929898229199,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.441182838239031,0
|short_description=p2@Cadm4
}}
}}

Latest revision as of 09:32, 26 September 2015

Short description:p2@Cadm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cadm4_5end
Coexpression cluster:MCL_coexpression_mm9:747
Association with transcript: -35bp_to_ENSMUST00000068023, NM_153112, uc009fps.1_5end
EntrezGene:Cadm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cadm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.17e-3223
neuroblast (sensu Vertebrata)3.17e-3223
neural cell5.11e-3243
ectodermal cell3.43e-3144
neurectodermal cell3.43e-3144
neuron1.89e-2133
neuronal stem cell1.89e-2133
neuroblast1.89e-2133
electrically signaling cell1.89e-2133
embryonic cell5.82e-1870
electrically responsive cell1.23e-1739
electrically active cell1.23e-1739
oligodendrocyte precursor cell2.03e-148
migratory neural crest cell2.09e-1110
neuron associated cell2.09e-1110
glial cell (sensu Vertebrata)2.09e-1110
neuron associated cell (sensu Vertebrata)2.09e-1110
glial cell2.09e-1110
glioblast2.09e-1110
glioblast (sensu Vertebrata)2.09e-1110
neuron of the substantia nigra7.17e-113
striatum neuron1.10e-093
oligodendrocyte7.54e-096
macroglial cell7.54e-096
astrocyte7.54e-096
central nervous system macrophage8.02e-082
microglial cell8.02e-082
somatic stem cell9.98e-0891
multi fate stem cell9.98e-0891
neuron of the dorsal spinal cord1.25e-072
stem cell5.08e-0797

Uber anatomy
Ontology termp-valuen
central nervous system1.65e-3173
nervous system1.54e-3075
regional part of nervous system6.49e-2654
ectoderm-derived structure4.44e-2395
ectoderm4.44e-2395
presumptive ectoderm4.44e-2395
gray matter1.26e-2234
neural tube6.33e-2252
neural rod6.33e-2252
future spinal cord6.33e-2252
neural keel6.33e-2252
basal ganglion1.08e-188
nuclear complex of neuraxis1.08e-188
aggregate regional part of brain1.08e-188
collection of basal ganglia1.08e-188
cerebral subcortex1.08e-188
neurectoderm5.06e-1764
neural plate5.06e-1764
presumptive neural plate5.06e-1764
regional part of brain1.27e-1546
brain3.24e-1547
future brain3.24e-1547
brain grey matter4.78e-1529
regional part of telencephalon4.78e-1529
telencephalon4.78e-1529
ecto-epithelium2.12e-1473
regional part of forebrain2.54e-1239
forebrain2.54e-1239
future forebrain2.54e-1239
posterior neural tube2.81e-1212
chordal neural plate2.81e-1212
anterior neural tube6.04e-1240
substantia nigra7.17e-113
telencephalic nucleus7.17e-113
midbrain nucleus7.17e-113
neural nucleus7.17e-113
nucleus of brain7.17e-113
regional part of spinal cord1.46e-105
gray matter of spinal cord1.46e-105
structure with developmental contribution from neural crest1.50e-1092
corpus striatum7.75e-105
striatum7.75e-105
ventral part of telencephalon7.75e-105
future corpus striatum7.75e-105
pre-chordal neural plate3.01e-0949
spinal cord8.28e-096
dorsal region element8.28e-096
dorsum8.28e-096
organ system subdivision1.08e-08194
regional part of midbrain3.01e-084
midbrain3.01e-084
presumptive midbrain3.01e-084
midbrain neural tube3.01e-084
tube1.07e-07114
dorsal horn of spinal cord1.25e-072
anatomical conduit6.48e-07122
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