Personal tools

FFCP PHASE1:Mm9::chr5:93327007..93327078,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27428
|EntrezGene=27428
|HGNC=
|HGNC=
|MCL_coexpression_id=2433
|TSSclassifier=NA
|UniProt=Q9QXN0
|UniProt=Q9QXN0
|association_with_transcript=0bp_to_ENSMUST00000113051,NM_001077596,uc008ydv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000113051,NM_001077596,uc008ydv.1_5end
|cluster_id=chr5:93327007..93327078,+
|description=CAGE_peak_3_at_Shroom3_5end
|description=CAGE_peak_3_at_Shroom3_5end
|id=chr5:93327007..93327078,+
|id=chr5:93327007..93327078,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!7.89e-19!59;UBERON:0000160!1.08e-14!43;UBERON:0000922!4.64e-09!328;UBERON:0000468!9.28e-09!333;UBERON:0000344!1.06e-07!15;UBERON:0001242!1.74e-07!13;UBERON:0000060!1.74e-07!13;UBERON:0001262!1.74e-07!13;UBERON:0004786!1.74e-07!13;UBERON:0004923!3.54e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.74e-23,47;UBERON:0000160,1.88e-19,31;UBERON:0000344,4.60e-08,15;UBERON:0001242,7.75e-08,13;UBERON:0001262,7.75e-08,13;UBERON:0004786,7.75e-08,13;UBERON:0004923,3.46e-07,24;UBERON:0000922,9.20e-07,320
|phase1_expression=0.640595388419176,10.1202868215415,10.0099832665698,13.6108895088074,16.5295590882295,5.03637815735669,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.595745707205312,0,3.99981056983517,3.21172993494038,9.76194338995534,6.46142994238612,3.878482188346,6.08074942260396,4.53654233567875,3.10422714917427,0,0,0,12.1317680295535,15.4598220183398,17.7627339948261,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.917733760808408,0,1.96222640742402,2.63623419281366,4.47188767870852,1.53985063787899,5.75010257459886,0,0,0,3.60163210450326,2.86533439938757,10.3134418455488,0.202316460859598,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,4.2264013585371,0.725827286159344,0.675029691658453,0.841299845405528,0.571301968807607,1.10434270475807,1.10241719293459,0.287536413054709,3.67687514644008,0,0.127687338085188,0.46081959976873,1.97829431595291,1.00636407962651,1.56274011167028,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.745597783301202,12.1161909333094,9.44644501334819,2.31891590961342,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,1.08245520505607,0.506719730950197,0,1.02765491747154,0.258937883647172,0.445326417194474,1.56136794089522,0.913396434936424,0.461230994512117,1.3565037649736,1.29347577849275,0.628332956648377,15.5732829672656,0.86759614151947,0,0.808834249737046,0.441683036920787,0,20.5030937339934,0.292780797011547,0.41889341362691,25.034791410442,0,0,0,0.599162557619291,0,0.628271760564322,0.521472960576829,0,0.62336413367868,0.648965052271031,2.13862664085664,0.248813941220186,1.0108910337347,4.41927897361595,2.86264974517948,2.29902104433473,2.52086981727489,4.21973489940002,4.62648194229029,6.66191345481219,9.27647073141315,11.9003550539947,5.17363183038821,4.72765200419548,3.87092473160687,2.6303487891309,0.834141747676794,2.78601733217733,1.4404749548556,6.17006227137329,0,0.257347907114715,0,8.28503090142008,7.03578179943289,6.84235833551856,9.46978942340841,8.46086196513836,5.39934895105824,9.06882384526591,5.09719462659276,7.47298191149885,6.25327429671226,1.47750717671186,2.02672023864639,2.19299981137998,1.09775057645525,1.47627060636409,0.420579897128254,0.92614151141356,45.5977920517641,6.34681359992506,7.46508876873319,7.43157349953403,8.76298736990235,13.1094291005173,14.4545728499166,14.8375988367796,14.7104009078799,14.1641101062649,15.834118154417,22.6810378126912,15.9870551437679,20.6728463990471,19.8847005884719,18.5201384126561,5.31070122668629,5.71242563048644,6.76246414038483,3.66572390121566,5.81857461502877,5.96154469067708,0.885311519739602,0.147610147979602,1.09899109488962,0.493588655687202,0.296452627087149,1.50160595144485,1.57247196090562,0.224862112384854,1.21716072833102,1.92941727801933,0.763877555344259,0.863088412352432,0.324270453550071,1.92192989231657,2.87536413054709,1.11642284300551,1.5601883655728,0.252578877947112,0.179397413521912,0,2.03228509183265,3.22135400009824,2.11854469374634,2.37643120085263,2.11221223459652,2.84760637651087,1.6663054862021,2.92700471786698,3.31033802623001,3.98636441367795,4.30527875375215,1.96635977658886,2.59027472798843,1.73578870297814,0,0,4.42587845717133,6.34654516500885,0.321101179975584,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,2.15423397732799,4.54040716109849,2.67358408898873,1.98153571552183,5.66734982344852,3.79932615284705,1.97643888973262,0.321321316421807,0.709700426041343,1.78065603667255,2.11753047159649,1.81467135269789,0,4.37005145078967,2.41858845571801,1.88605079755898,1.18120757152309,3.68922177532713,3.6179961043551,1.81766864738753,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,3.40439605753788,2.34079422240703,5.17434735131018,3.00071849044229,3.54680467284547,4.45922044005176,2.46823530903181,3.65357938937519,0.938686832254841,2.75381692122966,6.17479514553893,0.8244312647074,2.42196640043858,1.68876189798836,1.07435109602823,1.47726809770555,18.6547735443104,0.556275906031529,1.53783792718067,9.70018279427146,6.2966139305702,1.31857919903284,1.0935538217682,1.37266903923914,0.339956859987711,0.279902904647316,0.138199973804424,7.63736494412091,6.80122386199441,5.89626454667861,4.32021363287205,3.3454127362315,7.42432716737004,7.55240339754996,8.34799902825893,8.63794608547298,22.6826203260638,4.97071450469541,0,5.53211220362722,6.28742263736971,7.58359634541786,2.19571699912143,2.02747350588934,3.63807439801837,2.21347454234715,2.72634295506848,0.966336483304024,0,0,2.43270258348197,2.56777392912068,0.51968329191118,1.61124026100733,1.78813219303138,0.360586348559907,1.18151621739662,0.403865799792591,0.685861259894999,0.302478555410522,0.584747284438515,0.481059208201647,0.935015217452552,0.680191150845634,2.44184548711471,0.538283139656854,0.335769232728157,2.12508553435409,0.187682475451182,2.74727436400898,1.07184189539533,4.51414893631827,1.6942555278512,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,1.03552062350364,2.80225838477277,4.78829848081237,2.56100408631201,1.70174701947806,2.30574478890781,2.02227859295016,2.22246727801615,2.88449080134452,4.1719497246936,2.52697211763797,2.78827229879264,3.9611531691076,3.27745276144588,2.62503124859964,2.64203157195821,4.28664322154766,2.66533949673168,3.08654752741928,1.64834360321323,2.20798380201596,2.40008476669791,3.54951612318675,2.62279808942053,2.0348498328526,2.82328141245992,2.19997980518359,2.0122077016005,1.31534855718921,2.71608227691724,1.68342681497322,2.37270036248348,2.65962102414021,2.86461730218783,2.16911577660352,3.66522560864169,3.74715866906919,2.33931608445408,2.57845264857958,0.191288332068843,1.32354851471709,0.695603506861264
|phase1_expression=0.640595388419176,10.1202868215415,10.0099832665698,13.6108895088074,16.5295590882295,5.03637815735669,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.595745707205312,0,3.99981056983517,3.21172993494038,9.76194338995534,6.46142994238612,3.878482188346,6.08074942260396,4.53654233567875,3.10422714917427,0,0,0,12.1317680295535,15.4598220183398,17.7627339948261,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.917733760808408,0,1.96222640742402,2.63623419281366,4.47188767870852,1.53985063787899,5.75010257459886,0,0,0,3.60163210450326,2.86533439938757,10.3134418455488,0.202316460859598,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,4.2264013585371,0.725827286159344,0.675029691658453,0.841299845405528,0.571301968807607,1.10434270475807,1.10241719293459,0.287536413054709,3.67687514644008,0,0.127687338085188,0.46081959976873,1.97829431595291,1.00636407962651,1.56274011167028,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.745597783301202,12.1161909333094,9.44644501334819,2.31891590961342,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,1.08245520505607,0.506719730950197,0,1.02765491747154,0.258937883647172,0.445326417194474,1.56136794089522,0.913396434936424,0.461230994512117,1.3565037649736,1.29347577849275,0.628332956648377,15.5732829672656,0.86759614151947,0,0.808834249737046,0.441683036920787,0,20.5030937339934,0.292780797011547,0.41889341362691,25.034791410442,0,0,0,0.599162557619291,0,0.628271760564322,0.521472960576829,0,0.62336413367868,0.648965052271031,2.13862664085664,0.248813941220186,1.0108910337347,4.41927897361595,2.86264974517948,2.29902104433473,2.52086981727489,4.21973489940002,4.62648194229029,6.66191345481219,9.27647073141315,11.9003550539947,5.17363183038821,4.72765200419548,3.87092473160687,2.6303487891309,0.834141747676794,2.78601733217733,1.4404749548556,6.17006227137329,0,0.257347907114715,0,8.28503090142008,7.03578179943289,6.84235833551856,9.46978942340841,8.46086196513836,5.39934895105824,9.06882384526591,5.09719462659276,7.47298191149885,6.25327429671226,1.47750717671186,2.02672023864639,2.19299981137998,1.09775057645525,1.47627060636409,0.420579897128254,0.92614151141356,45.5977920517641,6.34681359992506,7.46508876873319,7.43157349953403,8.76298736990235,13.1094291005173,14.4545728499166,14.8375988367796,14.7104009078799,14.1641101062649,15.834118154417,22.6810378126912,15.9870551437679,20.6728463990471,19.8847005884719,18.5201384126561,5.31070122668629,5.71242563048644,6.76246414038483,3.66572390121566,5.81857461502877,5.96154469067708,0.885311519739602,0.147610147979602,1.09899109488962,0.493588655687202,0.296452627087149,1.50160595144485,1.57247196090562,0.224862112384854,1.21716072833102,1.92941727801933,0.763877555344259,0.863088412352432,0.324270453550071,1.92192989231657,2.87536413054709,1.11642284300551,1.5601883655728,0.252578877947112,0.179397413521912,0,2.03228509183265,3.22135400009824,2.11854469374634,2.37643120085263,2.11221223459652,2.84760637651087,1.6663054862021,2.92700471786698,3.31033802623001,3.98636441367795,4.30527875375215,1.96635977658886,2.59027472798843,1.73578870297814,0,0,4.42587845717133,6.34654516500885,0.321101179975584,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,2.15423397732799,4.54040716109849,2.67358408898873,1.98153571552183,5.66734982344852,3.79932615284705,1.97643888973262,0.321321316421807,0.709700426041343,1.78065603667255,2.11753047159649,1.81467135269789,0,4.37005145078967,2.41858845571801,1.88605079755898,1.18120757152309,3.68922177532713,3.6179961043551,1.81766864738753,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,3.40439605753788,2.34079422240703,5.17434735131018,3.00071849044229,3.54680467284547,4.45922044005176,2.46823530903181,3.65357938937519,0.938686832254841,2.75381692122966,6.17479514553893,0.8244312647074,2.42196640043858,1.68876189798836,1.07435109602823,1.47726809770555,18.6547735443104,0.556275906031529,1.53783792718067,9.70018279427146,6.2966139305702,1.31857919903284,1.0935538217682,1.37266903923914,0.339956859987711,0.279902904647316,0.138199973804424,7.63736494412091,6.80122386199441,5.89626454667861,4.32021363287205,3.3454127362315,7.42432716737004,7.55240339754996,8.34799902825893,8.63794608547298,22.6826203260638,4.97071450469541,0,5.53211220362722,6.28742263736971,7.58359634541786,2.19571699912143,2.02747350588934,3.63807439801837,2.21347454234715,2.72634295506848,0.966336483304024,0,0,2.43270258348197,2.56777392912068,0.51968329191118,1.61124026100733,1.78813219303138,0.360586348559907,1.18151621739662,0.403865799792591,0.685861259894999,0.302478555410522,0.584747284438515,0.481059208201647,0.935015217452552,0.680191150845634,2.44184548711471,0.538283139656854,0.335769232728157,2.12508553435409,0.187682475451182,2.74727436400898,1.07184189539533,4.51414893631827,1.6942555278512,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,1.03552062350364,2.80225838477277,4.78829848081237,2.56100408631201,1.70174701947806,2.30574478890781,2.02227859295016,2.22246727801615,2.88449080134452,4.1719497246936,2.52697211763797,2.78827229879264,3.9611531691076,3.27745276144588,2.62503124859964,2.64203157195821,4.28664322154766,2.66533949673168,3.08654752741928,1.64834360321323,2.20798380201596,2.40008476669791,3.54951612318675,2.62279808942053,2.0348498328526,2.82328141245992,2.19997980518359,2.0122077016005,1.31534855718921,2.71608227691724,1.68342681497322,2.37270036248348,2.65962102414021,2.86461730218783,2.16911577660352,3.66522560864169,3.74715866906919,2.33931608445408,2.57845264857958,0.191288332068843,1.32354851471709,0.695603506861264
|short_description=p3@Shroom3
|short_description=p3@Shroom3
}}
}}

Latest revision as of 09:27, 26 September 2015

Short description:p3@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shroom3_5end
Coexpression cluster:MCL_coexpression_mm9:2433
Association with transcript: 0bp_to_ENSMUST00000113051, NM_001077596, uc008ydv.1_5end
EntrezGene:Shroom3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B96.08
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D912.12
Mouse Schwann, donor2.CNhs12573.11746-123F99.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G89.28
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E37.47
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I345.60
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D314.45
intestine, embryo E18.CNhs10526.1289-20F714.84
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E914.16
intestine, neonate N06.CNhs11102.688-20B815.83
intestine, neonate N07.CNhs11095.720-20F222.68
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E319.88
intestine, neonate N30.CNhs11131.1384-42G118.52
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I118.65
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A98.35
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I122.68
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system4.74e-2347
intestine1.88e-1931
mucosa4.60e-0815
intestinal mucosa7.75e-0813
wall of intestine7.75e-0813
gastrointestinal system mucosa7.75e-0813
organ component layer3.46e-0724
embryo9.20e-07320
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:93327007..93327078,%2B&oldid=4245992"