FFCP PHASE1:Mm9::chr5:93326808..93326819,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:93326808..93326819,+
|short_description=p14@Shroom3
|description=CAGE_peak_14_at_Shroom3_5end
|association_with_transcript=-199bp_to_ENSMUST00000113051_5en...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27428 | |EntrezGene=27428 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QXN0 | |UniProt=Q9QXN0 | ||
|association_with_transcript=-199bp_to_ENSMUST00000113051_5end | |||
|cluster_id=chr5:93326808..93326819,+ | |||
|description=CAGE_peak_14_at_Shroom3_5end | |||
|id=chr5:93326808..93326819,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-13,6;CL:0000677,1.04e-13,6;CL:0000584,1.04e-13,6;CL:0000075,8.85e-12,7;CL:0002563,3.37e-09,9;CL:0002251,3.37e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.05e-10!15;UBERON:0005409!3.37e-10!59;UBERON:0000160!1.21e-09!43;UBERON:0001242!3.59e-09!13;UBERON:0000060!3.59e-09!13;UBERON:0001262!3.59e-09!13;UBERON:0004786!3.59e-09!13;UBERON:0004923!1.17e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.49e-18,13;UBERON:0001262,2.49e-18,13;UBERON:0004786,2.49e-18,13;UBERON:0000344,8.46e-16,15;UBERON:0000160,5.94e-12,31;UBERON:0004923,1.30e-09,24;UBERON:0005409,2.61e-09,47;UBERON:0003350,3.37e-09,9;UBERON:0004808,3.37e-09,9;UBERON:0001277,3.37e-09,9;UBERON:0000485,1.50e-07,11;UBERON:0000331,2.07e-07,3;UBERON:0002116,2.07e-07,3;UBERON:0001204,2.07e-07,3;UBERON:0001168,2.07e-07,3 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,1.51232105653415,3.00537437967808,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,2.28028103347649,1.00812051903972,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,1.1665793944457,0.139986421625363,2.87505128729943,0,0,0,0.771778308107841,0.573066879877513,2.57836046138721,0,0,0,0,0,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0,3.63460661282178,0.264450566663544,0.213288250535234,0,0.128867461322093,0.605050573870028,0.667134131534611,0.380451252225118,0.949058123089023,0.658795818896044,1.25667604400135,0.397912944082302,0,0,0.648414149624083,0.995706366271836,1.13800740571849,0.913988100877831,0,1.4255592949172,0.969762435838129,1.19230893813542,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.214337035031592,0.532020700926821,0.891844088010353,0.493647061806363,0.913394847343798,0.469343416127421,0,0,0,0,0.0603129249281559,0,0.492422699235184,0.582961673259701,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,1.94422459937689,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,1.51232105653415,3.00537437967808,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,2.28028103347649,1.00812051903972,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,1.1665793944457,0.139986421625363,2.87505128729943,0,0,0,0.771778308107841,0.573066879877513,2.57836046138721,0,0,0,0,0,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0,3.63460661282178,0.264450566663544,0.213288250535234,0,0.128867461322093,0.605050573870028,0.667134131534611,0.380451252225118,0.949058123089023,0.658795818896044,1.25667604400135,0.397912944082302,0,0,0.648414149624083,0.995706366271836,1.13800740571849,0.913988100877831,0,1.4255592949172,0.969762435838129,1.19230893813542,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.214337035031592,0.532020700926821,0.891844088010353,0.493647061806363,0.913394847343798,0.469343416127421,0,0,0,0,0.0603129249281559,0,0.492422699235184,0.582961673259701,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,1.94422459937689,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p14@Shroom3 | |||
}} | }} |
Latest revision as of 09:27, 26 September 2015
Short description: | p14@Shroom3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Shroom3_5end |
Coexpression cluster: | NA |
Association with transcript: | -199bp_to_ENSMUST00000113051_5end |
EntrezGene: | Shroom3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.04e-13 | 6 |
gut absorptive cell | 1.04e-13 | 6 |
enterocyte | 1.04e-13 | 6 |
columnar/cuboidal epithelial cell | 8.85e-12 | 7 |
intestinal epithelial cell | 3.37e-09 | 9 |
epithelial cell of alimentary canal | 3.37e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.49e-18 | 13 |
wall of intestine | 2.49e-18 | 13 |
gastrointestinal system mucosa | 2.49e-18 | 13 |
mucosa | 8.46e-16 | 15 |
intestine | 5.94e-12 | 31 |
organ component layer | 1.30e-09 | 24 |
gastrointestinal system | 2.61e-09 | 47 |
epithelium of mucosa | 3.37e-09 | 9 |
gastrointestinal system epithelium | 3.37e-09 | 9 |
intestinal epithelium | 3.37e-09 | 9 |
simple columnar epithelium | 1.50e-07 | 11 |
ileal mucosa | 2.07e-07 | 3 |
ileum | 2.07e-07 | 3 |
mucosa of small intestine | 2.07e-07 | 3 |
wall of small intestine | 2.07e-07 | 3 |