FFCP PHASE1:Mm9::chr2:22478013..22478038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14417 | |EntrezGene=14417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=P48320,Q548L4,Q3URJ3 | |UniProt=P48320,Q548L4,Q3URJ3 | ||
|association_with_transcript=166bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end | |association_with_transcript=166bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end | ||
|cluster_id=chr2:22478013..22478038,+ | |||
|description=CAGE_peak_5_at_Gad2_5end | |description=CAGE_peak_5_at_Gad2_5end | ||
|id=chr2:22478013..22478038,+ | |id=chr2:22478013..22478038,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.89e-19!23;CL:0000337!1.89e-19!23;CL:0000540!5.12e-11!33;CL:0000047!5.12e-11!33;CL:0000031!5.12e-11!33;CL:0000404!5.12e-11!33;CL:0002319!1.09e-08!43;CL:0000221!2.60e-08!44;CL:0000133!2.60e-08!44;CL:0000393!3.72e-08!39;CL:0000211!3.72e-08!39 | |ontology_enrichment_celltype=CL:0000117!1.89e-19!23;CL:0000337!1.89e-19!23;CL:0000540!5.12e-11!33;CL:0000047!5.12e-11!33;CL:0000031!5.12e-11!33;CL:0000404!5.12e-11!33;CL:0002319!1.09e-08!43;CL:0000221!2.60e-08!44;CL:0000133!2.60e-08!44;CL:0000393!3.72e-08!39;CL:0000211!3.72e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-27,23;CL:0000337,2.10e-27,23;CL:0000540,2.39e-17,33;CL:0000047,2.39e-17,33;CL:0000031,2.39e-17,33;CL:0000404,2.39e-17,33;CL:0000393,8.12e-14,39;CL:0000211,8.12e-14,39;CL:0002319,5.07e-12,43;CL:0000221,1.26e-11,44;CL:0000133,1.26e-11,44;CL:0002610,9.25e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.74e-34!63;UBERON:0001049!3.32e-32!52;UBERON:0005068!3.32e-32!52;UBERON:0006241!3.32e-32!52;UBERON:0007135!3.32e-32!52;UBERON:0002346!2.58e-31!71;UBERON:0003075!2.58e-31!71;UBERON:0007284!2.58e-31!71;UBERON:0000955!2.59e-31!50;UBERON:0006238!2.59e-31!50;UBERON:0002616!3.77e-30!49;UBERON:0003056!2.07e-29!49;UBERON:0001017!2.75e-29!73;UBERON:0005743!2.75e-29!73;UBERON:0000073!5.58e-29!75;UBERON:0001016!5.58e-29!75;UBERON:0004121!5.36e-26!102;UBERON:0000924!5.36e-26!102;UBERON:0006601!5.36e-26!102;UBERON:0002020!2.29e-25!34;UBERON:0003080!1.12e-23!40;UBERON:0002780!1.33e-22!39;UBERON:0001890!1.33e-22!39;UBERON:0006240!1.33e-22!39;UBERON:0002791!3.39e-21!29;UBERON:0003528!3.39e-21!29;UBERON:0001893!3.39e-21!29;UBERON:0007811!1.17e-19!86;UBERON:0000153!1.92e-16!94;UBERON:0000956!2.98e-14!21;UBERON:0001869!2.98e-14!21;UBERON:0000203!2.98e-14!21;UBERON:0002619!5.22e-12!17;UBERON:0002021!7.01e-10!10;UBERON:0000411!7.01e-10!10;UBERON:0001950!7.01e-10!10;UBERON:0003076!8.76e-09!12;UBERON:0003057!8.76e-09!12;UBERON:0002420!3.41e-08!8;UBERON:0007245!3.41e-08!8;UBERON:0010009!3.41e-08!8;UBERON:0010011!3.41e-08!8;UBERON:0000454!3.41e-08!8;UBERON:0000025!3.38e-07!114;UBERON:0002298!5.20e-07!6;UBERON:0004111!7.59e-07!122 | |ontology_enrichment_uberon=UBERON:0000033!8.74e-34!63;UBERON:0001049!3.32e-32!52;UBERON:0005068!3.32e-32!52;UBERON:0006241!3.32e-32!52;UBERON:0007135!3.32e-32!52;UBERON:0002346!2.58e-31!71;UBERON:0003075!2.58e-31!71;UBERON:0007284!2.58e-31!71;UBERON:0000955!2.59e-31!50;UBERON:0006238!2.59e-31!50;UBERON:0002616!3.77e-30!49;UBERON:0003056!2.07e-29!49;UBERON:0001017!2.75e-29!73;UBERON:0005743!2.75e-29!73;UBERON:0000073!5.58e-29!75;UBERON:0001016!5.58e-29!75;UBERON:0004121!5.36e-26!102;UBERON:0000924!5.36e-26!102;UBERON:0006601!5.36e-26!102;UBERON:0002020!2.29e-25!34;UBERON:0003080!1.12e-23!40;UBERON:0002780!1.33e-22!39;UBERON:0001890!1.33e-22!39;UBERON:0006240!1.33e-22!39;UBERON:0002791!3.39e-21!29;UBERON:0003528!3.39e-21!29;UBERON:0001893!3.39e-21!29;UBERON:0007811!1.17e-19!86;UBERON:0000153!1.92e-16!94;UBERON:0000956!2.98e-14!21;UBERON:0001869!2.98e-14!21;UBERON:0000203!2.98e-14!21;UBERON:0002619!5.22e-12!17;UBERON:0002021!7.01e-10!10;UBERON:0000411!7.01e-10!10;UBERON:0001950!7.01e-10!10;UBERON:0003076!8.76e-09!12;UBERON:0003057!8.76e-09!12;UBERON:0002420!3.41e-08!8;UBERON:0007245!3.41e-08!8;UBERON:0010009!3.41e-08!8;UBERON:0010011!3.41e-08!8;UBERON:0000454!3.41e-08!8;UBERON:0000025!3.38e-07!114;UBERON:0002298!5.20e-07!6;UBERON:0004111!7.59e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.82e-46,54;UBERON:0001049,1.77e-42,52;UBERON:0005068,1.77e-42,52;UBERON:0006241,1.77e-42,52;UBERON:0007135,1.77e-42,52;UBERON:0002346,3.00e-42,64;UBERON:0003075,3.00e-42,64;UBERON:0007284,3.00e-42,64;UBERON:0001017,1.20e-41,73;UBERON:0001016,3.10e-40,75;UBERON:0002020,2.69e-38,34;UBERON:0004121,3.15e-37,95;UBERON:0000924,3.15e-37,95;UBERON:0006601,3.15e-37,95;UBERON:0000955,8.92e-36,47;UBERON:0006238,8.92e-36,47;UBERON:0010371,1.09e-35,73;UBERON:0002616,5.17e-34,46;UBERON:0003056,3.62e-32,49;UBERON:0003528,2.43e-31,29;UBERON:0002791,2.43e-31,29;UBERON:0001893,2.43e-31,29;UBERON:0003080,5.57e-30,40;UBERON:0002780,2.63e-28,39;UBERON:0001890,2.63e-28,39;UBERON:0006240,2.63e-28,39;UBERON:0010314,4.73e-26,92;UBERON:0002619,6.94e-20,17;UBERON:0000956,7.19e-20,21;UBERON:0001869,7.19e-20,21;UBERON:0000203,7.19e-20,21;UBERON:0002021,1.52e-15,10;UBERON:0000411,1.52e-15,10;UBERON:0001950,1.52e-15,10;UBERON:0000025,7.53e-14,114;UBERON:0004111,2.79e-13,122;UBERON:0002420,1.03e-12,8;UBERON:0007245,1.03e-12,8;UBERON:0010009,1.03e-12,8;UBERON:0010011,1.03e-12,8;UBERON:0000454,1.03e-12,8;UBERON:0003076,2.47e-12,12;UBERON:0003057,2.47e-12,12;UBERON:0002240,2.21e-09,6;UBERON:0005174,2.21e-09,6;UBERON:0001137,2.21e-09,6;UBERON:0000483,1.13e-08,174;UBERON:0011216,1.32e-08,194;UBERON:0000369,1.75e-08,5;UBERON:0002435,1.75e-08,5;UBERON:0000204,1.75e-08,5;UBERON:0010082,1.75e-08,5;UBERON:0000119,1.87e-08,176;UBERON:0001948,6.13e-08,5;UBERON:0002315,6.13e-08,5;UBERON:0002950,1.44e-07,4;UBERON:0001891,1.44e-07,4;UBERON:0009616,1.44e-07,4;UBERON:0010286,1.44e-07,4;UBERON:0004684,9.25e-07,3;UBERON:0002275,9.25e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,4.43681982454325,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.540023753326763,0.210324961351382,2.85650984403804,3.75476519617743,7.96190194897201,6.3258010872036,7.35375029288017,9.91042928994498,8.2996769755372,9.98442466165583,2.90149833006426,1.28082701043374,2.6045668527838,5.30447698102624,2.8138130501584,7.63991238884051,6.18720029494702,4.27115042397309,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,5.27005434620785,3.97948742945565,0,0,0,0,10.6351353977424,16.4700217014706,9.67538511269056,6.77914848749878,8.69432554923124,11.4283424507758,14.2772311499627,0,0,0,0.631325567659422,0.130120442962704,0.919608417733892,0.540186389416048,1.35634336052144,2.38127747029647,1.66547836370305,1.49922759295566,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,6.9395683026162,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0,16.0660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.517293144389,8.471277639256,6.90487854760765,4.58316410751517,5.15559547031063,4.7955776383945,6.0431511791176,3.37511250115903,2.70192721934532,6.79713613476307,2.5888015587591,0,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.735374033800057,0.222246727801615,0.618105171716683,0,1.26348605881899,0,0.377252682772152,0.655490552289177,0.320125762024346,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.689531376628944,0,0.929621047115796,0,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,4.43681982454325,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.540023753326763,0.210324961351382,2.85650984403804,3.75476519617743,7.96190194897201,6.3258010872036,7.35375029288017,9.91042928994498,8.2996769755372,9.98442466165583,2.90149833006426,1.28082701043374,2.6045668527838,5.30447698102624,2.8138130501584,7.63991238884051,6.18720029494702,4.27115042397309,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,5.27005434620785,3.97948742945565,0,0,0,0,10.6351353977424,16.4700217014706,9.67538511269056,6.77914848749878,8.69432554923124,11.4283424507758,14.2772311499627,0,0,0,0.631325567659422,0.130120442962704,0.919608417733892,0.540186389416048,1.35634336052144,2.38127747029647,1.66547836370305,1.49922759295566,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,6.9395683026162,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0,16.0660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.517293144389,8.471277639256,6.90487854760765,4.58316410751517,5.15559547031063,4.7955776383945,6.0431511791176,3.37511250115903,2.70192721934532,6.79713613476307,2.5888015587591,0,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.735374033800057,0.222246727801615,0.618105171716683,0,1.26348605881899,0,0.377252682772152,0.655490552289177,0.320125762024346,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.689531376628944,0,0.929621047115796,0,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p5@Gad2 | |short_description=p5@Gad2 | ||
}} | }} |
Latest revision as of 09:06, 26 September 2015
Short description: | p5@Gad2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gad2_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 166bp_to_NM_008078, uc008ini.1, uc008inj.1, uc008ink.1_5end |
EntrezGene: | Gad2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.10e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-27 | 23 |
neuron | 2.39e-17 | 33 |
neuronal stem cell | 2.39e-17 | 33 |
neuroblast | 2.39e-17 | 33 |
electrically signaling cell | 2.39e-17 | 33 |
electrically responsive cell | 8.12e-14 | 39 |
electrically active cell | 8.12e-14 | 39 |
neural cell | 5.07e-12 | 43 |
ectodermal cell | 1.26e-11 | 44 |
neurectodermal cell | 1.26e-11 | 44 |
raphe nuclei neuron | 9.25e-07 | 3 |