FFCP PHASE1:Mm9::chr2:181333736..181333747,-: Difference between revisions
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{{FFCP|EntrezGene=229011|HGNC=|MCL_coexpression_id=335|UniProt=Q3TBN2,Q7TST3|association_with_transcript=104bp_to_NM_172676,uc008omw.1,uc008omx.1,uc012cmt.1_5end|description=CAGE_peak_4_at_Samd10_5end|id=chr2:181333736..181333747,-|ontology_enrichment_celltype=CL:0000540!8.25e-14!33;CL:0000047!8.25e-14!33;CL:0000031!8.25e-14!33;CL:0000404!8.25e-14!33;CL:0000221!2.04e-13!44;CL:0000133!2.04e-13!44;CL:0002319!2.73e-13!43;CL:0000393!2.77e-11!39;CL:0000211!2.77e-11!39;CL:0000055!1.02e-10!50;CL:0000117!3.12e-09!23;CL:0000337!3.12e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-33,23;CL:0000337,1.00e-33,23;CL:0000540,4.90e-32,33;CL:0000047,4.90e-32,33;CL:0000031,4.90e-32,33;CL:0000404,4.90e-32,33;CL:0002319,3.05e-29,43;CL:0000221,1.75e-28,44;CL:0000133,1.75e-28,44;CL:0000393,1.60e-26,39;CL:0000211,1.60e-26,39;CL:0002321,2.28e-16,70;CL:0002609,9.93e-13,6;CL:0000120,2.85e-11,3;CL:0002613,4.51e-11,3;CL:0000723,2.23e-10,91;CL:0000048,2.23e-10,91;CL:0002608,2.52e-10,3;CL:0002612,2.71e-10,3;CL:0000034,1.74e-09,97;CL:0002611,8.59e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.48e-10!75;UBERON:0001016!2.48e-10!75;UBERON:0001017!2.97e-10!73;UBERON:0005743!2.97e-10!73;UBERON:0004121!5.09e-10!102;UBERON:0000924!5.09e-10!102;UBERON:0006601!5.09e-10!102;UBERON:0002346!9.30e-08!71;UBERON:0003075!9.30e-08!71;UBERON:0007284!9.30e-08!71;UBERON:0002020!1.34e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.66e-21,34;UBERON:0001017,4.80e-19,73;UBERON:0001016,2.03e-18,75;UBERON:0001948,1.92e-16,5;UBERON:0002315,1.92e-16,5;UBERON:0002240,1.16e-13,6;UBERON:0005174,1.16e-13,6;UBERON:0001137,1.16e-13,6;UBERON:0004121,1.32e-13,95;UBERON:0000924,1.32e-13,95;UBERON:0006601,1.32e-13,95;UBERON:0001049,1.50e-12,52;UBERON:0005068,1.50e-12,52;UBERON:0006241,1.50e-12,52;UBERON:0007135,1.50e-12,52;UBERON:0000073,5.76e-12,54;UBERON:0003528,3.72e-11,29;UBERON:0002791,3.72e-11,29;UBERON:0001893,3.72e-11,29;UBERON:0002346,4.99e-11,64;UBERON:0003075,4.99e-11,64;UBERON:0007284,4.99e-11,64;UBERON:0002257,2.71e-10,3;UBERON:0010371,3.01e-09,73;UBERON:0000956,3.97e-08,21;UBERON:0001869,3.97e-08,21;UBERON:0000203,3.97e-08,21;UBERON:0002256,8.59e-08,2;UBERON:0002780,8.68e-08,39;UBERON:0001890,8.68e-08,39;UBERON:0006240,8.68e-08,39;UBERON:0003080,1.52e-07,40;UBERON:0001954,2.17e-07,7;UBERON:0003022,2.17e-07,7;UBERON:0002421,2.17e-07,7;UBERON:0000349,2.17e-07,7;UBERON:0002600,2.17e-07,7;UBERON:0000369,8.58e-07,5;UBERON:0002435,8.58e-07,5;UBERON:0000204,8.58e-07,5;UBERON:0010082,8.58e-07,5|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.411343300817216,0,1.78590909317247,0.198581902401771,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.304130793658544,0.183546752161682,0,0.872100625521786,1.09843091367236,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.05791152148994,2.64495489636016,3.80298842103708,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0,1.03689612308478,1.08004750665353,0.630974884054146,2.85650984403804,2.42955395046775,1.95985278743926,1.43768206527355,2.75765635983006,0,0.383062014255563,0.307213066512487,3.69281605644543,3.11057988248193,2.6045668527838,0,0,0,1.47314292736834,2.42031857358475,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.520455980298408,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0.11981512450592,0,0,0.748953197024114,0.457500602818626,0.879580464790051,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.390361328888111,0,0.720248519221397,0.90422890701429,0.408218994907967,0.640568601424249,0.655912071918102,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0,0,0,0,0,0.92614151141356,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.350679099451593,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.780534591431195,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0.955875191810208,0.445597348164788,0.566153061577665,1.21443210502468,0.584511715822624,1.18586333383957,0.642642632843614,0.283880170416537,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,7.89170114157866,0,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,0,0,2.41584120826006,4.03242008761012,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,0,0.68741272937475,0.685082519770642,0,0,0,0.453142408984205,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.192075457214608,0.229741875822453,1.90517476513229,0.231768651889711,0.578727661391115,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.429742108096597,0,0,0|short_description=p4@Samd10}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229011 | |||
|HGNC= | |||
|MCL_coexpression_id=335 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TBN2,Q7TST3 | |||
|association_with_transcript=104bp_to_NM_172676,uc008omw.1,uc008omx.1,uc012cmt.1_5end | |||
|cluster_id=chr2:181333736..181333747,- | |||
|description=CAGE_peak_4_at_Samd10_5end | |||
|id=chr2:181333736..181333747,- | |||
|ontology_enrichment_celltype=CL:0000540!8.25e-14!33;CL:0000047!8.25e-14!33;CL:0000031!8.25e-14!33;CL:0000404!8.25e-14!33;CL:0000221!2.04e-13!44;CL:0000133!2.04e-13!44;CL:0002319!2.73e-13!43;CL:0000393!2.77e-11!39;CL:0000211!2.77e-11!39;CL:0000055!1.02e-10!50;CL:0000117!3.12e-09!23;CL:0000337!3.12e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-33,23;CL:0000337,1.00e-33,23;CL:0000540,4.90e-32,33;CL:0000047,4.90e-32,33;CL:0000031,4.90e-32,33;CL:0000404,4.90e-32,33;CL:0002319,3.05e-29,43;CL:0000221,1.75e-28,44;CL:0000133,1.75e-28,44;CL:0000393,1.60e-26,39;CL:0000211,1.60e-26,39;CL:0002321,2.28e-16,70;CL:0002609,9.93e-13,6;CL:0000120,2.85e-11,3;CL:0002613,4.51e-11,3;CL:0000723,2.23e-10,91;CL:0000048,2.23e-10,91;CL:0002608,2.52e-10,3;CL:0002612,2.71e-10,3;CL:0000034,1.74e-09,97;CL:0002611,8.59e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.48e-10!75;UBERON:0001016!2.48e-10!75;UBERON:0001017!2.97e-10!73;UBERON:0005743!2.97e-10!73;UBERON:0004121!5.09e-10!102;UBERON:0000924!5.09e-10!102;UBERON:0006601!5.09e-10!102;UBERON:0002346!9.30e-08!71;UBERON:0003075!9.30e-08!71;UBERON:0007284!9.30e-08!71;UBERON:0002020!1.34e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.66e-21,34;UBERON:0001017,4.80e-19,73;UBERON:0001016,2.03e-18,75;UBERON:0001948,1.92e-16,5;UBERON:0002315,1.92e-16,5;UBERON:0002240,1.16e-13,6;UBERON:0005174,1.16e-13,6;UBERON:0001137,1.16e-13,6;UBERON:0004121,1.32e-13,95;UBERON:0000924,1.32e-13,95;UBERON:0006601,1.32e-13,95;UBERON:0001049,1.50e-12,52;UBERON:0005068,1.50e-12,52;UBERON:0006241,1.50e-12,52;UBERON:0007135,1.50e-12,52;UBERON:0000073,5.76e-12,54;UBERON:0003528,3.72e-11,29;UBERON:0002791,3.72e-11,29;UBERON:0001893,3.72e-11,29;UBERON:0002346,4.99e-11,64;UBERON:0003075,4.99e-11,64;UBERON:0007284,4.99e-11,64;UBERON:0002257,2.71e-10,3;UBERON:0010371,3.01e-09,73;UBERON:0000956,3.97e-08,21;UBERON:0001869,3.97e-08,21;UBERON:0000203,3.97e-08,21;UBERON:0002256,8.59e-08,2;UBERON:0002780,8.68e-08,39;UBERON:0001890,8.68e-08,39;UBERON:0006240,8.68e-08,39;UBERON:0003080,1.52e-07,40;UBERON:0001954,2.17e-07,7;UBERON:0003022,2.17e-07,7;UBERON:0002421,2.17e-07,7;UBERON:0000349,2.17e-07,7;UBERON:0002600,2.17e-07,7;UBERON:0000369,8.58e-07,5;UBERON:0002435,8.58e-07,5;UBERON:0000204,8.58e-07,5;UBERON:0010082,8.58e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.411343300817216,0,1.78590909317247,0.198581902401771,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.304130793658544,0.183546752161682,0,0.872100625521786,1.09843091367236,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.05791152148994,2.64495489636016,3.80298842103708,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0,1.03689612308478,1.08004750665353,0.630974884054146,2.85650984403804,2.42955395046775,1.95985278743926,1.43768206527355,2.75765635983006,0,0.383062014255563,0.307213066512487,3.69281605644543,3.11057988248193,2.6045668527838,0,0,0,1.47314292736834,2.42031857358475,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.520455980298408,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0.11981512450592,0,0,0.748953197024114,0.457500602818626,0.879580464790051,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.390361328888111,0,0.720248519221397,0.90422890701429,0.408218994907967,0.640568601424249,0.655912071918102,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0,0,0,0,0,0.92614151141356,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.350679099451593,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.780534591431195,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0.955875191810208,0.445597348164788,0.566153061577665,1.21443210502468,0.584511715822624,1.18586333383957,0.642642632843614,0.283880170416537,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,7.89170114157866,0,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,0,0,2.41584120826006,4.03242008761012,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,0,0.68741272937475,0.685082519770642,0,0,0,0.453142408984205,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.192075457214608,0.229741875822453,1.90517476513229,0.231768651889711,0.578727661391115,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.429742108096597,0,0,0 | |||
|short_description=p4@Samd10 | |||
}} |
Latest revision as of 08:18, 26 September 2015
Short description: | p4@Samd10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Samd10_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 104bp_to_NM_172676, uc008omw.1, uc008omx.1, uc012cmt.1_5end |
EntrezGene: | Samd10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.00e-33 | 23 |
neuroblast (sensu Vertebrata) | 1.00e-33 | 23 |
neuron | 4.90e-32 | 33 |
neuronal stem cell | 4.90e-32 | 33 |
neuroblast | 4.90e-32 | 33 |
electrically signaling cell | 4.90e-32 | 33 |
neural cell | 3.05e-29 | 43 |
ectodermal cell | 1.75e-28 | 44 |
neurectodermal cell | 1.75e-28 | 44 |
electrically responsive cell | 1.60e-26 | 39 |
electrically active cell | 1.60e-26 | 39 |
embryonic cell | 2.28e-16 | 70 |
neuron of cerebral cortex | 9.93e-13 | 6 |
granule cell | 2.85e-11 | 3 |
striatum neuron | 4.51e-11 | 3 |
somatic stem cell | 2.23e-10 | 91 |
multi fate stem cell | 2.23e-10 | 91 |
hippocampal neuron | 2.52e-10 | 3 |
neuron of the ventral spinal cord | 2.71e-10 | 3 |
stem cell | 1.74e-09 | 97 |
neuron of the dorsal spinal cord | 8.59e-08 | 2 |