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FFCP PHASE1:Mm9::chr5:8996618..8996632,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74114
|EntrezGene=74114
|HGNC=
|HGNC=
|MCL_coexpression_id=1326
|MCL_coexpression_id=1326
|TSSclassifier=NA
|UniProt=Q3V3N1
|UniProt=Q3V3N1
|association_with_transcript=409bp_to_ENSMUST00000157024,uc008wku.1_5end
|association_with_transcript=409bp_to_ENSMUST00000157024,uc008wku.1_5end
|cluster_id=chr5:8996618..8996632,-
|description=CAGE_peak_2_at_Crot_5end
|description=CAGE_peak_2_at_Crot_5end
|id=chr5:8996618..8996632,-
|id=chr5:8996618..8996632,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.63e-10,25;CL:0002563,4.85e-10,9;CL:0002251,4.85e-10,9;CL:0000239,4.04e-08,6;CL:0000677,4.04e-08,6;CL:0000584,4.04e-08,6;CL:0000223,1.00e-07,20;CL:0000075,8.83e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.55e-12!130;UBERON:0000925!1.55e-12!130;UBERON:0006595!1.55e-12!130;UBERON:0001007!2.44e-12!128;UBERON:0001555!2.44e-12!128;UBERON:0007026!2.44e-12!128;UBERON:0004921!1.64e-11!126;UBERON:0004185!1.64e-11!126;UBERON:0005409!7.92e-10!59;UBERON:0000344!1.75e-09!15;UBERON:0003929!3.96e-09!55;UBERON:0000160!5.11e-09!43;UBERON:0001242!1.54e-08!13;UBERON:0000060!1.54e-08!13;UBERON:0001262!1.54e-08!13;UBERON:0004786!1.54e-08!13;UBERON:0000490!2.56e-08!66;UBERON:0009854!2.71e-07!23;UBERON:0009856!2.71e-07!23;UBERON:0004923!5.31e-07!24;UBERON:0002107!6.11e-07!22;UBERON:0007499!6.11e-07!22;UBERON:0006925!6.11e-07!22;UBERON:0009497!6.11e-07!22;UBERON:0000015!6.11e-07!22;UBERON:0002423!6.11e-07!22;UBERON:0006235!6.11e-07!22;UBERON:0008835!6.11e-07!22;UBERON:0003894!6.11e-07!22;UBERON:0004161!6.11e-07!22;UBERON:0008836!6.11e-07!22
|ontology_enrichment_uberon=UBERON:0004119!1.55e-12!130;UBERON:0000925!1.55e-12!130;UBERON:0006595!1.55e-12!130;UBERON:0001007!2.44e-12!128;UBERON:0001555!2.44e-12!128;UBERON:0007026!2.44e-12!128;UBERON:0004921!1.64e-11!126;UBERON:0004185!1.64e-11!126;UBERON:0005409!7.92e-10!59;UBERON:0000344!1.75e-09!15;UBERON:0003929!3.96e-09!55;UBERON:0000160!5.11e-09!43;UBERON:0001242!1.54e-08!13;UBERON:0000060!1.54e-08!13;UBERON:0001262!1.54e-08!13;UBERON:0004786!1.54e-08!13;UBERON:0000490!2.56e-08!66;UBERON:0009854!2.71e-07!23;UBERON:0009856!2.71e-07!23;UBERON:0004923!5.31e-07!24;UBERON:0002107!6.11e-07!22;UBERON:0007499!6.11e-07!22;UBERON:0006925!6.11e-07!22;UBERON:0009497!6.11e-07!22;UBERON:0000015!6.11e-07!22;UBERON:0002423!6.11e-07!22;UBERON:0006235!6.11e-07!22;UBERON:0008835!6.11e-07!22;UBERON:0003894!6.11e-07!22;UBERON:0004161!6.11e-07!22;UBERON:0008836!6.11e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.68e-24,31;UBERON:0005409,3.59e-19,47;UBERON:0001007,8.25e-17,116;UBERON:0001555,8.25e-17,116;UBERON:0007026,8.25e-17,116;UBERON:0000344,2.26e-16,15;UBERON:0004119,2.93e-16,118;UBERON:0000925,2.93e-16,118;UBERON:0006595,2.93e-16,118;UBERON:0004921,1.96e-15,114;UBERON:0001242,1.31e-14,13;UBERON:0001262,1.31e-14,13;UBERON:0004786,1.31e-14,13;UBERON:0003350,4.85e-10,9;UBERON:0004808,4.85e-10,9;UBERON:0001277,4.85e-10,9;UBERON:0000485,1.44e-09,11;UBERON:0009854,1.94e-09,23;UBERON:0009856,1.94e-09,23;UBERON:0002107,8.06e-09,22;UBERON:0007499,8.06e-09,22;UBERON:0006925,8.06e-09,22;UBERON:0009497,8.06e-09,22;UBERON:0000015,8.06e-09,22;UBERON:0002423,8.06e-09,22;UBERON:0006235,8.06e-09,22;UBERON:0008835,8.06e-09,22;UBERON:0003894,8.06e-09,22;UBERON:0004161,8.06e-09,22;UBERON:0008836,8.06e-09,22;UBERON:0003929,1.54e-08,55;UBERON:0004923,1.59e-08,24;UBERON:0002365,2.91e-08,25;UBERON:0002330,2.91e-08,25;UBERON:0000490,3.63e-07,66
|phase1_expression=2.88267924788629,52.3463111459042,48.6849186146804,50.5115232882406,43.5779285053322,3.69334398206158,3.50418960893289,1.16210991097419,0.422366166455,1.40438715793196,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.992909512008853,0.522399578277871,10.7194923271582,8.71755268055246,39.0477735598214,24.5534337810673,22.6244794320183,34.9643091799728,28.4794046628722,15.5211357458713,0.635030673459631,1.23012957516914,0,2.3108129580102,1.82858109894342,2.04169356262369,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.604572480854284,0.869593466105033,39.5794983411438,14.9593693415705,17.2705021324101,26.6408331153544,15.2329141613094,11.0951091904084,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,20.2105467102736,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,1.17588707135705,0.251333182659351,0,0.578397427679647,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0,25.034791410442,0.838705871541442,0,0.635351135365324,0,0,0,0,0.255715457330331,0.20778804455956,0,0.407357455401265,0.995255764880744,1.76905930903572,215.492460427749,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.187403449119458,53.0341910014982,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,1.02939162845886,1.98914449576915,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,95.1606094993338,34.6430242329243,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,2.44615848229357,6.84812254005213,24.6755112003146,25.3636390274977,21.3634927480229,19.6966907320739,20.2762650603885,23.3693046250098,29.8270508827078,56.3569803309859,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.442655759869801,0.442830443938806,0.31399745568275,0.740382983530803,32.6097889795864,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,7.29608520487659,18.9447375099776,23.0029130443767,31.6319805518228,47.4297263134132,29.299149841865,25.4744327201115,30.3939418458921,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.491804836130026,2.27223834483936,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,5.42699415653264,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0.469343416127421,0.42366414172764,2.20528398054962,1.81374878235628,0.645857706783622,1.26657142349127,3.81991500810037,4.43180429311665,27.399198643206,0.741701208042039,0.341741761595705,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.979660166265606,0.829199842826543,1.90934123603023,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,2.15782954215713,2.97552440611209,1.83229159388821,3.75883422546199,1.24267862617385,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.410843828659309,0.389762468933385,0.716106782669926,0.79472541912506,0.600977247599844,0.443068581523732,0.504832249740738,0.381034033274999,0.604957110821043,0.584747284438515,0.673482891482306,1.40252282617883,2.49403421976732,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,0.375364950902364,0.915758121336325,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.715308569841963,0.872078499793971,0,0.0846146078916765,0.914639864363863,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.29551344712669,1.22769312950907,0.619747364743864,0.192906610981141,0,0.701794825336225,2.14871054048298,1.3390183244819,1.32354851471709,0
|phase1_expression=2.88267924788629,52.3463111459042,48.6849186146804,50.5115232882406,43.5779285053322,3.69334398206158,3.50418960893289,1.16210991097419,0.422366166455,1.40438715793196,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.992909512008853,0.522399578277871,10.7194923271582,8.71755268055246,39.0477735598214,24.5534337810673,22.6244794320183,34.9643091799728,28.4794046628722,15.5211357458713,0.635030673459631,1.23012957516914,0,2.3108129580102,1.82858109894342,2.04169356262369,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.604572480854284,0.869593466105033,39.5794983411438,14.9593693415705,17.2705021324101,26.6408331153544,15.2329141613094,11.0951091904084,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,20.2105467102736,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,1.17588707135705,0.251333182659351,0,0.578397427679647,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0,25.034791410442,0.838705871541442,0,0.635351135365324,0,0,0,0,0.255715457330331,0.20778804455956,0,0.407357455401265,0.995255764880744,1.76905930903572,215.492460427749,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.187403449119458,53.0341910014982,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,1.02939162845886,1.98914449576915,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,95.1606094993338,34.6430242329243,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,2.44615848229357,6.84812254005213,24.6755112003146,25.3636390274977,21.3634927480229,19.6966907320739,20.2762650603885,23.3693046250098,29.8270508827078,56.3569803309859,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.442655759869801,0.442830443938806,0.31399745568275,0.740382983530803,32.6097889795864,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,7.29608520487659,18.9447375099776,23.0029130443767,31.6319805518228,47.4297263134132,29.299149841865,25.4744327201115,30.3939418458921,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.491804836130026,2.27223834483936,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,5.42699415653264,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0.469343416127421,0.42366414172764,2.20528398054962,1.81374878235628,0.645857706783622,1.26657142349127,3.81991500810037,4.43180429311665,27.399198643206,0.741701208042039,0.341741761595705,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.979660166265606,0.829199842826543,1.90934123603023,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,2.15782954215713,2.97552440611209,1.83229159388821,3.75883422546199,1.24267862617385,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.410843828659309,0.389762468933385,0.716106782669926,0.79472541912506,0.600977247599844,0.443068581523732,0.504832249740738,0.381034033274999,0.604957110821043,0.584747284438515,0.673482891482306,1.40252282617883,2.49403421976732,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,0.375364950902364,0.915758121336325,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.715308569841963,0.872078499793971,0,0.0846146078916765,0.914639864363863,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.29551344712669,1.22769312950907,0.619747364743864,0.192906610981141,0,0.701794825336225,2.14871054048298,1.3390183244819,1.32354851471709,0
|short_description=p2@Crot
|short_description=p2@Crot
}}
}}

Latest revision as of 07:50, 26 September 2015

Short description:p2@Crot
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Crot_5end
Coexpression cluster:MCL_coexpression_mm9:1326
Association with transcript: 409bp_to_ENSMUST00000157024, uc008wku.1_5end
EntrezGene:Crot
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Crot

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I552.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I648.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I350.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.72
GP2+ M cell, pool1.CNhs13228.11845-124H939.05
GP2+ M cell, pool2.CNhs13231.11846-124I124.55
GP2+ M cell, pool3.CNhs13240.11847-124I222.62
Ileum epithelium, pool1.CNhs13199.10252-104B934.96
Ileum epithelium, pool2.CNhs13232.10253-104C128.48
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F426.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.21
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G4215.49
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A253.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I395.16
intestine, adult.CNhs10496.178-9A334.64
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D124.68
intestine, neonate N01.CNhs11192.1322-23E925.36
intestine, neonate N06.CNhs11102.688-20B821.36
intestine, neonate N07.CNhs11095.720-20F219.70
intestine, neonate N10.CNhs11098.755-23A520.28
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E329.83
intestine, neonate N30.CNhs11131.1384-42G156.36
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B232.61
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G218.94
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H231.63
liver, neonate N10.CNhs11115.751-24B947.43
liver, neonate N20.CNhs11220.823-25A329.30
liver, neonate N25.CNhs11198.1368-26H125.47
liver, neonate N30.CNhs11106.1382-42D130.39
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I127.40
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.68e-2431
gastrointestinal system3.59e-1947
digestive system8.25e-17116
digestive tract8.25e-17116
primitive gut8.25e-17116
mucosa2.26e-1615
endoderm-derived structure2.93e-16118
endoderm2.93e-16118
presumptive endoderm2.93e-16118
subdivision of digestive tract1.96e-15114
intestinal mucosa1.31e-1413
wall of intestine1.31e-1413
gastrointestinal system mucosa1.31e-1413
epithelium of mucosa4.85e-109
gastrointestinal system epithelium4.85e-109
intestinal epithelium4.85e-109
simple columnar epithelium1.44e-0911
digestive tract diverticulum1.94e-0923
sac1.94e-0923
liver8.06e-0922
epithelial sac8.06e-0922
digestive gland8.06e-0922
epithelium of foregut-midgut junction8.06e-0922
anatomical boundary8.06e-0922
hepatobiliary system8.06e-0922
foregut-midgut junction8.06e-0922
hepatic diverticulum8.06e-0922
liver primordium8.06e-0922
septum transversum8.06e-0922
liver bud8.06e-0922
gut epithelium1.54e-0855
organ component layer1.59e-0824
exocrine gland2.91e-0825
exocrine system2.91e-0825
unilaminar epithelium3.63e-0766
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