FFCP PHASE1:Mm9::chr4:123465086..123465098,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr4:123465086..123465098,+ to FFCP PHASE1:Mm9::chr4:123465086..123465098,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=230726 | |EntrezGene=230726 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENSMUST00000124290_5end | |||
|cluster_id=chr4:123465086..123465098,+ | |||
|description=CAGE_peak_2_at_Rhbdl2_5end | |||
|id=chr4:123465086..123465098,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.80e-19,6;CL:0000677,5.80e-19,6;CL:0000584,5.80e-19,6;CL:0000066,1.46e-16,25;CL:0000075,3.60e-16,7;CL:0002076,7.39e-16,15;CL:0002563,1.93e-12,9;CL:0002251,1.93e-12,9;CL:0000223,1.66e-11,20;CL:0000682,3.94e-11,3;CL:0000068,4.74e-10,3;CL:0002202,4.74e-10,3;CL:0000069,4.74e-10,3;CL:0002632,4.74e-10,3;CL:0002368,4.74e-10,3;CL:0000307,4.74e-10,3;CL:0000377,4.74e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.57e-13!59;UBERON:0000160!2.38e-11!43;UBERON:0000344!8.44e-11!15;UBERON:0001242!4.54e-09!13;UBERON:0000060!4.54e-09!13;UBERON:0001262!4.54e-09!13;UBERON:0004786!4.54e-09!13;UBERON:0004119!1.94e-07!130;UBERON:0000925!1.94e-07!130;UBERON:0006595!1.94e-07!130;UBERON:0004923!3.46e-07!24;UBERON:0001007!4.53e-07!128;UBERON:0001555!4.53e-07!128;UBERON:0007026!4.53e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-24,15;UBERON:0001242,1.22e-18,13;UBERON:0001262,1.22e-18,13;UBERON:0004786,1.22e-18,13;UBERON:0000160,4.47e-17,31;UBERON:0004923,2.22e-14,24;UBERON:0003350,1.93e-12,9;UBERON:0004808,1.93e-12,9;UBERON:0001277,1.93e-12,9;UBERON:0005409,5.31e-12,47;UBERON:0000485,4.60e-10,11;UBERON:0003126,4.74e-10,3;UBERON:0001005,4.74e-10,3;UBERON:0007196,4.74e-10,3;UBERON:0001558,4.74e-10,3;UBERON:0001007,9.55e-09,116;UBERON:0001555,9.55e-09,116;UBERON:0007026,9.55e-09,116;UBERON:0004119,1.60e-08,118;UBERON:0000925,1.60e-08,118;UBERON:0006595,1.60e-08,118;UBERON:0001962,8.02e-08,2;UBERON:0001961,8.02e-08,2;UBERON:0001744,8.02e-08,2;UBERON:0004921,7.04e-07,114 | |||
|phase1_expression=0,9.77131141390211,10.4649825059593,2.11724947914781,1.00179145989269,4.36486106970913,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,9.40578052375397,11.4846392823004,10.7690499039769,6.03319451520489,1.52018735565099,0.756090389279792,5.76499327703792,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,3.29367825117628,3.0331466700887,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0.970601099684455,0.662524555381181,1.93950101254089,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0.528901133327089,0,0,0.257734922644187,0,0.22237804384487,0.380451252225118,1.89811624617805,0.658795818896044,0.502670417600539,1.1937388322469,0.58489226135736,2.69645822596266,0.432276099749388,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.969762435838129,0.561086559122548,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.98931751764888,0.322928853391811,0.965006798850494,1.07435109602823,0.984845398470368,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.134864346384821,0.41326727862668,0.785267825952089,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.410843828659309,0.909445760844565,0.358053391334963,0.198681354781265,0.360586348559907,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,1.15913756419314,0.187682475451182,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,1.12369808963859,0.448176066834085,0.229741875822453,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0,1.10295709559758,0.927471342481686 | |phase1_expression=0,9.77131141390211,10.4649825059593,2.11724947914781,1.00179145989269,4.36486106970913,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,9.40578052375397,11.4846392823004,10.7690499039769,6.03319451520489,1.52018735565099,0.756090389279792,5.76499327703792,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,3.29367825117628,3.0331466700887,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0.970601099684455,0.662524555381181,1.93950101254089,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0.528901133327089,0,0,0.257734922644187,0,0.22237804384487,0.380451252225118,1.89811624617805,0.658795818896044,0.502670417600539,1.1937388322469,0.58489226135736,2.69645822596266,0.432276099749388,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.969762435838129,0.561086559122548,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.98931751764888,0.322928853391811,0.965006798850494,1.07435109602823,0.984845398470368,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.134864346384821,0.41326727862668,0.785267825952089,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.410843828659309,0.909445760844565,0.358053391334963,0.198681354781265,0.360586348559907,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,1.15913756419314,0.187682475451182,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,1.12369808963859,0.448176066834085,0.229741875822453,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0,1.10295709559758,0.927471342481686 | ||
|short_description=p2@Rhbdl2 | |||
}} | }} |
Latest revision as of 07:42, 26 September 2015
Short description: | p2@Rhbdl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rhbdl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -18bp_to_ENSMUST00000124290_5end |
EntrezGene: | Rhbdl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.80e-19 | 6 |
gut absorptive cell | 5.80e-19 | 6 |
enterocyte | 5.80e-19 | 6 |
epithelial cell | 1.46e-16 | 25 |
columnar/cuboidal epithelial cell | 3.60e-16 | 7 |
endo-epithelial cell | 7.39e-16 | 15 |
intestinal epithelial cell | 1.93e-12 | 9 |
epithelial cell of alimentary canal | 1.93e-12 | 9 |
endodermal cell | 1.66e-11 | 20 |
M cell of gut | 3.94e-11 | 3 |
duct epithelial cell | 4.74e-10 | 3 |
epithelial cell of tracheobronchial tree | 4.74e-10 | 3 |
branched duct epithelial cell | 4.74e-10 | 3 |
epithelial cell of lower respiratory tract | 4.74e-10 | 3 |
respiratory epithelial cell | 4.74e-10 | 3 |
tracheal epithelial cell | 4.74e-10 | 3 |
tracheoblast | 4.74e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-24 | 15 |
intestinal mucosa | 1.22e-18 | 13 |
wall of intestine | 1.22e-18 | 13 |
gastrointestinal system mucosa | 1.22e-18 | 13 |
intestine | 4.47e-17 | 31 |
organ component layer | 2.22e-14 | 24 |
epithelium of mucosa | 1.93e-12 | 9 |
gastrointestinal system epithelium | 1.93e-12 | 9 |
intestinal epithelium | 1.93e-12 | 9 |
gastrointestinal system | 5.31e-12 | 47 |
simple columnar epithelium | 4.60e-10 | 11 |
trachea | 4.74e-10 | 3 |
respiratory airway | 4.74e-10 | 3 |
tracheobronchial tree | 4.74e-10 | 3 |
lower respiratory tract | 4.74e-10 | 3 |
digestive system | 9.55e-09 | 116 |
digestive tract | 9.55e-09 | 116 |
primitive gut | 9.55e-09 | 116 |
endoderm-derived structure | 1.60e-08 | 118 |
endoderm | 1.60e-08 | 118 |
presumptive endoderm | 1.60e-08 | 118 |
gut-associated lymphoid tissue | 8.02e-08 | 2 |
mucosa-associated lymphoid tissue | 8.02e-08 | 2 |
lymphoid tissue | 8.02e-08 | 2 |
subdivision of digestive tract | 7.04e-07 | 114 |