FFCP PHASE1:Mm9::chr9:118835756..118835772,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69274 | |EntrezGene=69274 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q52KL5 | |UniProt=Q52KL5 | ||
|association_with_transcript=102bp_to_NM_133710,uc009rzz.2_5end | |association_with_transcript=102bp_to_NM_133710,uc009rzz.2_5end | ||
|cluster_id=chr9:118835756..118835772,+ | |||
|description=CAGE_peak_2_at_Ctdspl_5end | |description=CAGE_peak_2_at_Ctdspl_5end | ||
|id=chr9:118835756..118835772,+ | |id=chr9:118835756..118835772,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.95e-09,6;CL:0000677,8.95e-09,6;CL:0000584,8.95e-09,6;CL:0000075,2.53e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.64e-15!59;UBERON:0000160!5.35e-15!43;UBERON:0000344!2.47e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-18,31;UBERON:0005409,5.19e-17,47;UBERON:0000344,5.03e-11,15;UBERON:0004119,4.16e-10,118;UBERON:0000925,4.16e-10,118;UBERON:0006595,4.16e-10,118;UBERON:0001242,2.75e-09,13;UBERON:0001262,2.75e-09,13;UBERON:0004786,2.75e-09,13;UBERON:0001007,3.34e-09,116;UBERON:0001555,3.34e-09,116;UBERON:0007026,3.34e-09,116;UBERON:0004923,5.71e-09,24;UBERON:0004921,3.42e-08,114 | |||
|phase1_expression=0.640595388419176,5.58360652222978,6.82498859084304,9.0739263392049,8.5152274090879,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.75991665072747,2.2940928106717,3.44539178469012,2.15380998079537,1.72376986148711,5.89072600314759,2.01624103807945,2.21730510655305,0,0,0,0.288851619751275,0.997407872150954,0.204169356262369,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.183546752161682,3.12956537739216,0.436050312760893,0.219686182734472,0.388859798148567,1.25987779462826,0,0,0,0,1.54355661621568,0.85960031981627,1.54701627683233,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0.614426133024974,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.711858403995515,0.559198337475902,0,0.151143120213571,2.02905142091174,0,0,0.539703191637817,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0.70667914902068,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0.506719730950197,0,0.91347103775248,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.376999773989026,4.44950941921873,0.289198713839823,1.76922110389975,0.161766849947409,0.441683036920787,0,3.72783522436244,0,0.209446706813455,3.83185582812887,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.502617408451458,1.73824320192276,0.767146371990992,0.62336413367868,0.811206315338788,0.81471491080253,0.248813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.2562274405697,0.562210347358373,0.517406741478031,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,1.02891068203972,0,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0.32833492815819,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,0.308713837137853,3.63460661282178,0.793351699990633,0.213288250535234,0,0.38660238396628,1.61346819698674,3.55804870151792,5.1360919050391,4.2707615539006,4.28217282282428,6.53471542880701,4.97391180102877,4.48417400373976,0.898819408654221,1.29682829924817,5.17767310461355,0,0.571242563048644,3.38123207019241,0.407302655690628,0.969762435838129,1.19230893813542,1.20149420536089,1.47610147979602,1.09899109488962,1.35736880313981,0.296452627087149,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,2.58654466233247,0.37898282354097,0.488894929326078,0.169745085775188,0.704070744865506,1.50755631697634,1.6663054862021,3.51240566144038,2.04925687338048,1.10732344824387,2.23236676120482,1.96635977658886,3.10832967358612,2.31438493730419,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0.163934945376675,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0,0.404810701674894,0,0,1.60660658210904,0.425820255624806,0.35613120733451,0.81443479676788,0.164970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,3.6179961043551,1.45413491791002,1.42598951353889,1.26414703174326,3.16255825724996,2.06271086496374,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,1.17335854031855,1.69465656691056,0.220528398054962,0.65954501176592,0.968786560175433,1.08563264870681,1.19372344003136,0.820704498725306,3.20628920292836,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0.474503990371703,0.406638934253697,1.08005340821801,0.836353184057875,1.52853794622324,1.07891477107857,1.23980183588004,1.04702376793612,1.8146096260851,0,0,0,0.496375471371293,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.443971906748129,0.358855426437903,0,0.579568782096571,0.93841237725591,0,0.857473516316263,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0,0.824140228955577,0,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.768301828858431,0.574354689556133,0.476293691283074,0.347652977834566,0.77163688185482,1.23625770240992,1.03039244094078,1.02860775715625,0.532427418478012,0.715308569841963,0.436039249896986,0.752875043322645,0.930760686808441,0.182927972872773,0.526139422875686,0.271608227691724,0,0.593175090620871,0.29551344712669,0.409231043169689,0.929621047115796,0.771626443924566,0.749431733813838,0.701794825336225,1.28922632428979,0.765153328275374,0,0.231867835620421 | |phase1_expression=0.640595388419176,5.58360652222978,6.82498859084304,9.0739263392049,8.5152274090879,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.75991665072747,2.2940928106717,3.44539178469012,2.15380998079537,1.72376986148711,5.89072600314759,2.01624103807945,2.21730510655305,0,0,0,0.288851619751275,0.997407872150954,0.204169356262369,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.183546752161682,3.12956537739216,0.436050312760893,0.219686182734472,0.388859798148567,1.25987779462826,0,0,0,0,1.54355661621568,0.85960031981627,1.54701627683233,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0.614426133024974,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.711858403995515,0.559198337475902,0,0.151143120213571,2.02905142091174,0,0,0.539703191637817,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0.70667914902068,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0.506719730950197,0,0.91347103775248,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.376999773989026,4.44950941921873,0.289198713839823,1.76922110389975,0.161766849947409,0.441683036920787,0,3.72783522436244,0,0.209446706813455,3.83185582812887,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.502617408451458,1.73824320192276,0.767146371990992,0.62336413367868,0.811206315338788,0.81471491080253,0.248813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.2562274405697,0.562210347358373,0.517406741478031,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,1.02891068203972,0,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0.32833492815819,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,0.308713837137853,3.63460661282178,0.793351699990633,0.213288250535234,0,0.38660238396628,1.61346819698674,3.55804870151792,5.1360919050391,4.2707615539006,4.28217282282428,6.53471542880701,4.97391180102877,4.48417400373976,0.898819408654221,1.29682829924817,5.17767310461355,0,0.571242563048644,3.38123207019241,0.407302655690628,0.969762435838129,1.19230893813542,1.20149420536089,1.47610147979602,1.09899109488962,1.35736880313981,0.296452627087149,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,2.58654466233247,0.37898282354097,0.488894929326078,0.169745085775188,0.704070744865506,1.50755631697634,1.6663054862021,3.51240566144038,2.04925687338048,1.10732344824387,2.23236676120482,1.96635977658886,3.10832967358612,2.31438493730419,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0.163934945376675,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0,0.404810701674894,0,0,1.60660658210904,0.425820255624806,0.35613120733451,0.81443479676788,0.164970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,3.6179961043551,1.45413491791002,1.42598951353889,1.26414703174326,3.16255825724996,2.06271086496374,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,1.17335854031855,1.69465656691056,0.220528398054962,0.65954501176592,0.968786560175433,1.08563264870681,1.19372344003136,0.820704498725306,3.20628920292836,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0.474503990371703,0.406638934253697,1.08005340821801,0.836353184057875,1.52853794622324,1.07891477107857,1.23980183588004,1.04702376793612,1.8146096260851,0,0,0,0.496375471371293,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.443971906748129,0.358855426437903,0,0.579568782096571,0.93841237725591,0,0.857473516316263,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0,0.824140228955577,0,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.768301828858431,0.574354689556133,0.476293691283074,0.347652977834566,0.77163688185482,1.23625770240992,1.03039244094078,1.02860775715625,0.532427418478012,0.715308569841963,0.436039249896986,0.752875043322645,0.930760686808441,0.182927972872773,0.526139422875686,0.271608227691724,0,0.593175090620871,0.29551344712669,0.409231043169689,0.929621047115796,0.771626443924566,0.749431733813838,0.701794825336225,1.28922632428979,0.765153328275374,0,0.231867835620421 | ||
|short_description=p2@Ctdspl | |short_description=p2@Ctdspl | ||
}} | }} |
Latest revision as of 07:42, 26 September 2015
Short description: | p2@Ctdspl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctdspl_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 102bp_to_NM_133710, uc009rzz.2_5end |
EntrezGene: | Ctdspl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.95e-09 | 6 |
gut absorptive cell | 8.95e-09 | 6 |
enterocyte | 8.95e-09 | 6 |
columnar/cuboidal epithelial cell | 2.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.52e-18 | 31 |
gastrointestinal system | 5.19e-17 | 47 |
mucosa | 5.03e-11 | 15 |
endoderm-derived structure | 4.16e-10 | 118 |
endoderm | 4.16e-10 | 118 |
presumptive endoderm | 4.16e-10 | 118 |
intestinal mucosa | 2.75e-09 | 13 |
wall of intestine | 2.75e-09 | 13 |
gastrointestinal system mucosa | 2.75e-09 | 13 |
digestive system | 3.34e-09 | 116 |
digestive tract | 3.34e-09 | 116 |
primitive gut | 3.34e-09 | 116 |
organ component layer | 5.71e-09 | 24 |
subdivision of digestive tract | 3.42e-08 | 114 |