Personal tools

FFCP PHASE1:Mm9::chr1:127573597..127573652,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:127573597..127573652,+
|DHSsupport=NA
|short_description=p1@Gpr39
|DPIdataset=NA
|description=CAGE_peak_1_at_Gpr39_5end
|association_with_transcript=24bp_to_NM_027677,uc007ckh.2_5end
|EntrezGene=71111
|EntrezGene=71111
|HGNC=
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=Q5U431
|UniProt=Q5U431
|association_with_transcript=24bp_to_NM_027677,uc007ckh.2_5end
|cluster_id=chr1:127573597..127573652,+
|description=CAGE_peak_1_at_Gpr39_5end
|id=chr1:127573597..127573652,+
|ontology_enrichment_celltype=CL:0000066!1.16e-08!25;CL:0000223!1.95e-08!20
|ontology_enrichment_celltype_v019_2=CL:0000066,5.16e-14,25;CL:0000223,6.84e-13,20;CL:0002076,7.64e-10,15;CL:0002563,2.89e-09,9;CL:0002251,2.89e-09,9;CL:0000222,5.51e-09,7;CL:0000680,4.82e-08,6;CL:0000187,4.82e-08,6;CL:0000056,4.82e-08,6;CL:0000239,2.12e-07,6;CL:0000677,2.12e-07,6;CL:0000584,2.12e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.57e-24!128;UBERON:0001555!1.57e-24!128;UBERON:0007026!1.57e-24!128;UBERON:0004119!2.96e-24!130;UBERON:0000925!2.96e-24!130;UBERON:0006595!2.96e-24!130;UBERON:0004921!4.74e-23!126;UBERON:0004185!4.74e-23!126;UBERON:0005409!9.13e-22!59;UBERON:0000160!3.73e-18!43;UBERON:0002100!2.97e-14!98;UBERON:0000466!3.27e-14!79;UBERON:0005177!2.44e-12!85;UBERON:0003914!6.95e-12!47;UBERON:0009569!1.79e-11!66;UBERON:0003104!6.92e-11!131;UBERON:0009142!6.92e-11!131;UBERON:0000481!1.17e-10!230;UBERON:0000344!1.86e-10!15;UBERON:0001242!5.18e-09!13;UBERON:0000060!5.18e-09!13;UBERON:0001262!5.18e-09!13;UBERON:0004786!5.18e-09!13;UBERON:0000077!5.40e-09!97;UBERON:0004923!1.19e-08!24;UBERON:0009854!1.28e-08!23;UBERON:0009856!1.28e-08!23;UBERON:0005256!1.65e-08!47;UBERON:0002107!3.31e-08!22;UBERON:0007499!3.31e-08!22;UBERON:0006925!3.31e-08!22;UBERON:0009497!3.31e-08!22;UBERON:0000015!3.31e-08!22;UBERON:0002423!3.31e-08!22;UBERON:0006235!3.31e-08!22;UBERON:0008835!3.31e-08!22;UBERON:0003894!3.31e-08!22;UBERON:0004161!3.31e-08!22;UBERON:0008836!3.31e-08!22;UBERON:0005172!3.44e-08!49;UBERON:0005173!3.44e-08!49;UBERON:0002417!3.44e-08!49;UBERON:0000916!3.44e-08!49;UBERON:0001041!4.25e-08!92;UBERON:0000464!2.87e-07!57;UBERON:0000926!3.32e-07!193;UBERON:0004120!3.32e-07!193;UBERON:0006603!3.32e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.24e-22,116;UBERON:0001555,4.24e-22,116;UBERON:0007026,4.24e-22,116;UBERON:0004119,2.28e-21,118;UBERON:0000925,2.28e-21,118;UBERON:0006595,2.28e-21,118;UBERON:0004921,2.58e-20,114;UBERON:0005409,1.26e-18,47;UBERON:0000160,2.38e-18,31;UBERON:0000344,4.86e-15,15;UBERON:0001242,7.50e-13,13;UBERON:0001262,7.50e-13,13;UBERON:0004786,7.50e-13,13;UBERON:0002100,2.10e-11,90;UBERON:0005256,2.19e-09,45;UBERON:0003350,2.89e-09,9;UBERON:0004808,2.89e-09,9;UBERON:0001277,2.89e-09,9;UBERON:0000490,4.04e-09,66;UBERON:0009854,8.69e-09,23;UBERON:0009856,8.69e-09,23;UBERON:0004923,1.07e-08,24;UBERON:0002107,3.27e-08,22;UBERON:0007499,3.27e-08,22;UBERON:0006925,3.27e-08,22;UBERON:0009497,3.27e-08,22;UBERON:0000015,3.27e-08,22;UBERON:0002423,3.27e-08,22;UBERON:0006235,3.27e-08,22;UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0004161,3.27e-08,22;UBERON:0008836,3.27e-08,22;UBERON:0005177,1.55e-07,79;UBERON:0003104,3.38e-07,61;UBERON:0009142,3.38e-07,61;UBERON:0003914,3.43e-07,47;UBERON:0000485,4.22e-07,11;UBERON:0005911,7.80e-07,69
|phase1_expression=0,20.5895490507223,15.0149748998547,15.4256747766483,11.0197060588196,4.19698179779725,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,14.5593104742,15.3704218315004,11.4846392823004,10.7690499039769,9.26526300549323,3.6104449696711,5.54466285471848,4.6563407237614,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,0,0,0,0,0,0,59.5491949024481,59.305504763416,32.854868636941,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,14.9210472900849,10.0286703978565,8.76642556871652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40607017234866,2.58127163094416,1.3599426674155,3.2382191498269,1.29955283489534,1.79210754838934,0.983110940922263,1.02258193546835,0.779358013808606,0.35333957451034,0,14.115912515575,0,0,1.73192832808971,1.77351905832569,2.52762222507392,1.48439043634778,0,0,0.173485326766136,0,0.461230994512117,0,0.470354828542819,0.376999773989026,3.46072954828123,0.722996784599558,0,0,0,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,1.24275463521301,0,0.36012412292203,0,0.393528463494808,0.771335564436891,0.930135779001631,1.3413670069981,0.700592054203017,0.493679549740441,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,0.134206418760372,0,0,12.2254949704005,6.61126416658861,0.213288250535234,0.928946687441754,0.77320476793256,1.81515172161008,0.667134131534611,1.33157938278791,4.74529061544512,1.31759163779209,1.25667604400135,1.39269530428806,2.14460495831032,7.19055526923377,6.91641759599022,6.37252074413975,0.569003702859245,0.799739588268102,3.38123207019241,1.01825663922657,1.55161989734101,0.49095073923223,0.632365371242573,0.885660887877613,1.255989822731,0.246794327843601,1.77871576252289,0.500535317148282,0.786235980452812,0.899448449539415,1.01430060694251,0.72353147925725,1.01850340712568,1.43848068725405,1.29708181420028,4.3929826110093,1.43768206527355,1.86070473834252,1.24815069245824,2.77836765741823,1.4351793081753,2.41221760681684,1.47802552133284,0.189491411770485,0.651859905768103,0.509235257325564,1.17345124144251,1.00503754465089,2.14239276797412,0.975668239288994,0.157635144106191,0.221464689648775,1.75400245523236,0.983179888294428,0.345369963731791,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0.395287777946524,0,1.13552068166615,0.35613120733451,0.488660878060728,1.64970122972535,1.32745138339963,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,1.84461088766356,1.80899805217755,1.81766864738753,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0.847328283455281,1.54369878638473,0,0.161464426695906,0,0,0.164140899745061,2.62332752966866,0,0.341741761595705,0.206386867963223,0.740778109478847,0.376736914009382,0.136694227721025,0.228778173206523,0,0.279902904647316,0.138199973804424,8.59203556213602,0.474503990371703,0.406638934253697,1.83609079397062,2.29997125615916,3.49380101993884,4.18079473792944,3.05817786183743,8.11443420150492,2.46268449254406,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0.651021924219751,0.314578033277133,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.443971906748129,0,0,8.50034213741638,0.563047426353546,2.56412273974171,1.92931541171159,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.972426868273176,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0
|phase1_expression=0,20.5895490507223,15.0149748998547,15.4256747766483,11.0197060588196,4.19698179779725,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,14.5593104742,15.3704218315004,11.4846392823004,10.7690499039769,9.26526300549323,3.6104449696711,5.54466285471848,4.6563407237614,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,0,0,0,0,0,0,59.5491949024481,59.305504763416,32.854868636941,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,14.9210472900849,10.0286703978565,8.76642556871652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40607017234866,2.58127163094416,1.3599426674155,3.2382191498269,1.29955283489534,1.79210754838934,0.983110940922263,1.02258193546835,0.779358013808606,0.35333957451034,0,14.115912515575,0,0,1.73192832808971,1.77351905832569,2.52762222507392,1.48439043634778,0,0,0.173485326766136,0,0.461230994512117,0,0.470354828542819,0.376999773989026,3.46072954828123,0.722996784599558,0,0,0,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,1.24275463521301,0,0.36012412292203,0,0.393528463494808,0.771335564436891,0.930135779001631,1.3413670069981,0.700592054203017,0.493679549740441,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,0.134206418760372,0,0,12.2254949704005,6.61126416658861,0.213288250535234,0.928946687441754,0.77320476793256,1.81515172161008,0.667134131534611,1.33157938278791,4.74529061544512,1.31759163779209,1.25667604400135,1.39269530428806,2.14460495831032,7.19055526923377,6.91641759599022,6.37252074413975,0.569003702859245,0.799739588268102,3.38123207019241,1.01825663922657,1.55161989734101,0.49095073923223,0.632365371242573,0.885660887877613,1.255989822731,0.246794327843601,1.77871576252289,0.500535317148282,0.786235980452812,0.899448449539415,1.01430060694251,0.72353147925725,1.01850340712568,1.43848068725405,1.29708181420028,4.3929826110093,1.43768206527355,1.86070473834252,1.24815069245824,2.77836765741823,1.4351793081753,2.41221760681684,1.47802552133284,0.189491411770485,0.651859905768103,0.509235257325564,1.17345124144251,1.00503754465089,2.14239276797412,0.975668239288994,0.157635144106191,0.221464689648775,1.75400245523236,0.983179888294428,0.345369963731791,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0.395287777946524,0,1.13552068166615,0.35613120733451,0.488660878060728,1.64970122972535,1.32745138339963,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,1.84461088766356,1.80899805217755,1.81766864738753,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0.847328283455281,1.54369878638473,0,0.161464426695906,0,0,0.164140899745061,2.62332752966866,0,0.341741761595705,0.206386867963223,0.740778109478847,0.376736914009382,0.136694227721025,0.228778173206523,0,0.279902904647316,0.138199973804424,8.59203556213602,0.474503990371703,0.406638934253697,1.83609079397062,2.29997125615916,3.49380101993884,4.18079473792944,3.05817786183743,8.11443420150492,2.46268449254406,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0.651021924219751,0.314578033277133,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.443971906748129,0,0,8.50034213741638,0.563047426353546,2.56412273974171,1.92931541171159,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.972426868273176,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0
|short_description=p1@Gpr39
}}
}}

Latest revision as of 07:05, 26 September 2015

Short description:p1@Gpr39
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpr39_5end
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: 24bp_to_NM_027677, uc007ckh.2_5end
EntrezGene:Gpr39
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpr39

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.37
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D859.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D959.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B332.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system4.24e-22116
digestive tract4.24e-22116
primitive gut4.24e-22116
endoderm-derived structure2.28e-21118
endoderm2.28e-21118
presumptive endoderm2.28e-21118
subdivision of digestive tract2.58e-20114
gastrointestinal system1.26e-1847
intestine2.38e-1831
mucosa4.86e-1515
intestinal mucosa7.50e-1313
wall of intestine7.50e-1313
gastrointestinal system mucosa7.50e-1313
trunk2.10e-1190
trunk mesenchyme2.19e-0945
epithelium of mucosa2.89e-099
gastrointestinal system epithelium2.89e-099
intestinal epithelium2.89e-099
unilaminar epithelium4.04e-0966
digestive tract diverticulum8.69e-0923
sac8.69e-0923
organ component layer1.07e-0824
liver3.27e-0822
epithelial sac3.27e-0822
digestive gland3.27e-0822
epithelium of foregut-midgut junction3.27e-0822
anatomical boundary3.27e-0822
hepatobiliary system3.27e-0822
foregut-midgut junction3.27e-0822
hepatic diverticulum3.27e-0822
liver primordium3.27e-0822
septum transversum3.27e-0822
liver bud3.27e-0822
trunk region element1.55e-0779
mesenchyme3.38e-0761
entire embryonic mesenchyme3.38e-0761
epithelial tube3.43e-0747
simple columnar epithelium4.22e-0711
endo-epithelium7.80e-0769
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:127573597..127573652,%2B&oldid=4239783"