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FFCP PHASE1:Mm9::chr4:117564599..117564645,-: Difference between revisions

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{{FFCP|EntrezGene=67728|HGNC=|MCL_coexpression_id=155|UniProt=Q9CR25|association_with_transcript=0bp_to_ENSMUST00000030265,ENSMUST00000125781,ENSMUST00000139332,NM_026344,uc008ujd.1,uc008uje.1_5end|description=CAGE_peak_1_at_Dph2_5end|id=chr4:117564599..117564645,-|ontology_enrichment_celltype=CL:0000838!4.05e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,4.05e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!2.74e-09!86;UBERON:0000153!5.04e-09!94;UBERON:0002370!8.70e-08!23;UBERON:0000974!8.70e-08!23;UBERON:0004807!8.70e-08!23;UBERON:0005058!8.70e-08!23;UBERON:0003351!8.70e-08!23;UBERON:0009113!8.70e-08!23;UBERON:0003295!8.70e-08!23;UBERON:0009722!8.70e-08!23;UBERON:0005562!8.70e-08!23;UBERON:0007690!8.70e-08!23;UBERON:0003408!2.60e-07!24;UBERON:0002193!2.78e-07!48;UBERON:0006562!2.81e-07!24;UBERON:0001557!2.81e-07!24;UBERON:0001042!2.81e-07!24;UBERON:0008814!2.81e-07!24;UBERON:0009145!2.81e-07!24;UBERON:0002390!3.58e-07!45;UBERON:0003061!3.58e-07!45;UBERON:0000072!3.84e-07!27;UBERON:0004177!3.92e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-08,23;UBERON:0000974,8.66e-08,23;UBERON:0004807,8.66e-08,23;UBERON:0005058,8.66e-08,23;UBERON:0003351,8.66e-08,23;UBERON:0009113,8.66e-08,23;UBERON:0003295,8.66e-08,23;UBERON:0009722,8.66e-08,23;UBERON:0005562,8.66e-08,23;UBERON:0007690,8.66e-08,23;UBERON:0003408,2.58e-07,24;UBERON:0002193,2.77e-07,48;UBERON:0002405,2.77e-07,48;UBERON:0006562,2.79e-07,24;UBERON:0001557,2.79e-07,24;UBERON:0001042,2.79e-07,24;UBERON:0008814,2.79e-07,24;UBERON:0009145,2.79e-07,24;UBERON:0002390,3.57e-07,45;UBERON:0003061,3.57e-07,45;UBERON:0000072,3.83e-07,27;UBERON:0004177,3.91e-07,29;UBERON:0005057,3.91e-07,29|phase1_expression=5.12476310735341,3.83872948403297,1.81999695755814,2.41971369045464,2.50447864973174,6.04365378882803,6.07392865548367,16.9151553708465,32.3814060948834,27.1514850533512,38.3528248825131,42.199472108533,15.7504671536709,19.2324885321794,7.32841475994458,3.84703008040669,5.59649502502517,12.4607555316504,10.5578113876419,12.7316895539409,4.16712121740242,9.33334941288322,7.83599367416806,5.11975752938901,4.81759490241057,2.29692785646008,4.73838195774982,4.52489588640367,4.56056206695297,5.54466285471848,5.76499327703792,15.8757668364908,22.1423323530445,0,7.51014211353314,11.470190529736,11.8418226632174,3.76678467663217,2.3440060335714,3.66466620781659,1.76469446409304,1.36609096991689,0.971020706062307,2.14024590558481,2.02753862439029,1.28482726513177,5.47673941043627,10.247182349881,3.95435128922049,4.6663175777828,4.19959264876088,8.62515386189829,10.5703041816374,4.35217285206807,8.4023449785616,3.60163210450326,1.43266719969378,4.64104883049698,14.566785181891,12.1667925232568,7.60597684207415,6.09920157724438,3.55717918444456,8.54904731417329,12.8552627133707,6.3943210345149,7.49000276296012,3.84218305321555,9.7468235569969,9.31540974488665,12.4091727197315,5.99867067247988,6.84692476950002,9.18680994112155,11.6931474642248,15.6267193723704,3.30347642998166,4.34136949489638,4.14737639791857,8.5726087024626,10.8870295886867,13.022834263919,5.58365998002762,5.6276261003168,5.80633341551878,4.41942878210502,4.6982654663704,9.50637173709033,9.46577416664801,4.60986516651392,4.34796733052517,6.0229671388697,6.11974200336975,2.15881276655127,5.84798775702902,1.79210754838934,3.7919993435573,3.91989741929533,3.89679006904303,4.59341446863442,3.80277233397037,2.56652954828636,2.54805239706646,0,4.5463118612355,6.33399663687746,6.0662933401774,3.65388415100992,8.2860122767095,6.23456984072264,6.7659277438793,7.91610243611567,3.45923245884088,4.97384713823654,4.11560474974967,5.78066320116507,2.71914464507811,2.60278842455841,6.19227386364912,4.20593809863264,3.3126227769059,4.363877278217,1.86391761218122,6.73395833126558,7.54008144528438,4.85368404896324,6.23038647430785,5.99902730993408,5.20987930999565,4.34392854273986,7.32000964509802,9.42407640846483,4.51943232499919,5.37002460393694,6.85700547046548,4.70499662896497,3.7680564624617,3.23458123586242,5.81262344397452,2.94618598241064,6.11566081924707,9.42598628177239,7.92273371143537,5.87748789559289,6.25935792192216,6.02134485338794,6.46541899462129,3.88055056108524,7.54487975264948,4.53854592402766,6.51019159406611,5.69908904311695,3.05851974148158,2.78601733217733,4.93877127379064,5.7719937377363,2.80885274925294,5.66165395652373,3.9782889915383,6.62802472113606,3.28336483973535,5.40186184383045,6.15536312521547,3.73852040320067,4.31947916084659,4.88321283975857,5.36546802799238,4.90414437942112,4.27855609775049,4.10418660197738,2.67527071501324,4.09359964790931,4.61055242111206,3.35516046900929,5.04695876553905,7.40913209130848,3.30418782983798,6.61126416658861,4.90562976231038,5.34144345279009,6.05677068213839,5.84882221407693,5.33707305227689,6.46767128782701,5.69434873853414,2.9645811850322,4.27269854960458,2.78539060857611,5.26403035221624,4.49409704327111,3.02593269824572,4.38110801159608,8.91439134479484,5.598177117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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67728
|HGNC=
|MCL_coexpression_id=155
|TSSclassifier=NA
|UniProt=Q9CR25
|association_with_transcript=0bp_to_ENSMUST00000030265,ENSMUST00000125781,ENSMUST00000139332,NM_026344,uc008ujd.1,uc008uje.1_5end
|cluster_id=chr4:117564599..117564645,-
|description=CAGE_peak_1_at_Dph2_5end
|id=chr4:117564599..117564645,-
|ontology_enrichment_celltype=CL:0000838!4.05e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,4.05e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.74e-09!86;UBERON:0000153!5.04e-09!94;UBERON:0002370!8.70e-08!23;UBERON:0000974!8.70e-08!23;UBERON:0004807!8.70e-08!23;UBERON:0005058!8.70e-08!23;UBERON:0003351!8.70e-08!23;UBERON:0009113!8.70e-08!23;UBERON:0003295!8.70e-08!23;UBERON:0009722!8.70e-08!23;UBERON:0005562!8.70e-08!23;UBERON:0007690!8.70e-08!23;UBERON:0003408!2.60e-07!24;UBERON:0002193!2.78e-07!48;UBERON:0006562!2.81e-07!24;UBERON:0001557!2.81e-07!24;UBERON:0001042!2.81e-07!24;UBERON:0008814!2.81e-07!24;UBERON:0009145!2.81e-07!24;UBERON:0002390!3.58e-07!45;UBERON:0003061!3.58e-07!45;UBERON:0000072!3.84e-07!27;UBERON:0004177!3.92e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-08,23;UBERON:0000974,8.66e-08,23;UBERON:0004807,8.66e-08,23;UBERON:0005058,8.66e-08,23;UBERON:0003351,8.66e-08,23;UBERON:0009113,8.66e-08,23;UBERON:0003295,8.66e-08,23;UBERON:0009722,8.66e-08,23;UBERON:0005562,8.66e-08,23;UBERON:0007690,8.66e-08,23;UBERON:0003408,2.58e-07,24;UBERON:0002193,2.77e-07,48;UBERON:0002405,2.77e-07,48;UBERON:0006562,2.79e-07,24;UBERON:0001557,2.79e-07,24;UBERON:0001042,2.79e-07,24;UBERON:0008814,2.79e-07,24;UBERON:0009145,2.79e-07,24;UBERON:0002390,3.57e-07,45;UBERON:0003061,3.57e-07,45;UBERON:0000072,3.83e-07,27;UBERON:0004177,3.91e-07,29;UBERON:0005057,3.91e-07,29
|phase1_expression=5.12476310735341,3.83872948403297,1.81999695755814,2.41971369045464,2.50447864973174,6.04365378882803,6.07392865548367,16.9151553708465,32.3814060948834,27.1514850533512,38.3528248825131,42.199472108533,15.7504671536709,19.2324885321794,7.32841475994458,3.84703008040669,5.59649502502517,12.4607555316504,10.5578113876419,12.7316895539409,4.16712121740242,9.33334941288322,7.83599367416806,5.11975752938901,4.81759490241057,2.29692785646008,4.73838195774982,4.52489588640367,4.56056206695297,5.54466285471848,5.76499327703792,15.8757668364908,22.1423323530445,0,7.51014211353314,11.470190529736,11.8418226632174,3.76678467663217,2.3440060335714,3.66466620781659,1.76469446409304,1.36609096991689,0.971020706062307,2.14024590558481,2.02753862439029,1.28482726513177,5.47673941043627,10.247182349881,3.95435128922049,4.6663175777828,4.19959264876088,8.62515386189829,10.5703041816374,4.35217285206807,8.4023449785616,3.60163210450326,1.43266719969378,4.64104883049698,14.566785181891,12.1667925232568,7.60597684207415,6.09920157724438,3.55717918444456,8.54904731417329,12.8552627133707,6.3943210345149,7.49000276296012,3.84218305321555,9.7468235569969,9.31540974488665,12.4091727197315,5.99867067247988,6.84692476950002,9.18680994112155,11.6931474642248,15.6267193723704,3.30347642998166,4.34136949489638,4.14737639791857,8.5726087024626,10.8870295886867,13.022834263919,5.58365998002762,5.6276261003168,5.80633341551878,4.41942878210502,4.6982654663704,9.50637173709033,9.46577416664801,4.60986516651392,4.34796733052517,6.0229671388697,6.11974200336975,2.15881276655127,5.84798775702902,1.79210754838934,3.7919993435573,3.91989741929533,3.89679006904303,4.59341446863442,3.80277233397037,2.56652954828636,2.54805239706646,0,4.5463118612355,6.33399663687746,6.0662933401774,3.65388415100992,8.2860122767095,6.23456984072264,6.7659277438793,7.91610243611567,3.45923245884088,4.97384713823654,4.11560474974967,5.78066320116507,2.71914464507811,2.60278842455841,6.19227386364912,4.20593809863264,3.3126227769059,4.363877278217,1.86391761218122,6.73395833126558,7.54008144528438,4.85368404896324,6.23038647430785,5.99902730993408,5.20987930999565,4.34392854273986,7.32000964509802,9.42407640846483,4.51943232499919,5.37002460393694,6.85700547046548,4.70499662896497,3.7680564624617,3.23458123586242,5.81262344397452,2.94618598241064,6.11566081924707,9.42598628177239,7.92273371143537,5.87748789559289,6.25935792192216,6.02134485338794,6.46541899462129,3.88055056108524,7.54487975264948,4.53854592402766,6.51019159406611,5.69908904311695,3.05851974148158,2.78601733217733,4.93877127379064,5.7719937377363,2.80885274925294,5.66165395652373,3.9782889915383,6.62802472113606,3.28336483973535,5.40186184383045,6.15536312521547,3.73852040320067,4.31947916084659,4.88321283975857,5.36546802799238,4.90414437942112,4.27855609775049,4.10418660197738,2.67527071501324,4.09359964790931,4.61055242111206,3.35516046900929,5.04695876553905,7.40913209130848,3.30418782983798,6.61126416658861,4.90562976231038,5.34144345279009,6.05677068213839,5.84882221407693,5.33707305227689,6.46767128782701,5.69434873853414,2.9645811850322,4.27269854960458,2.78539060857611,5.26403035221624,4.49409704327111,3.02593269824572,4.38110801159608,8.91439134479484,5.59817711787671,6.76246414038483,5.49858585182348,5.81857461502877,5.19005067188357,3.85742876457969,3.39503340353085,3.61097074035162,2.59134044235781,4.15033677922008,7.00749444007595,8.05891879964132,7.64531182108503,5.47722327748958,6.51178331331525,6.3656462945355,4.60313819921297,2.91843408195064,4.11842119782122,1.43768206527355,1.48856379067401,3.12037673114561,5.55673531483646,2.15276896226295,1.4473305640901,4.0645701836653,8.90609635321278,8.8001087278694,5.60158783058121,6.57132695207806,5.69521275302174,2.85652369063216,3.51240566144038,2.99506773801763,2.43611158613652,3.82691444777969,3.76885623846197,5.00786447411097,4.77341893318988,1.50791283939272,4.89515115436839,4.91764273019036,4.41498794087572,4.81651769963376,4.92289083687253,6.06559297893699,2.27223834483936,5.67914794949262,6.63745865304285,4.30846795465598,6.4521575447189,7.5751549188014,5.94460714656548,7.2865926301481,6.72188473196017,4.74345333535828,4.4984984299053,4.5420827266646,4.62970569534864,3.74640006513225,5.60898418106621,3.98235415019888,6.06951590387454,8.16273603804828,5.09233715340925,6.79194353625777,6.14870295887855,4.39328098385976,4.72593848320757,3.56497378384721,4.42451461110142,4.21674434299995,3.09406629744561,7.48967132658334,4.50152735078276,6.85601024048599,5.5727629108214,7.44828981297549,4.63758925765383,5.26556865926787,3.65357938937519,3.05073220482823,1.69465656691056,5.29268155331909,4.122156323537,3.06782410722221,3.79971427047382,4.17803204010978,6.23735419031233,6.12109756922687,4.26478194624172,7.34744787430767,4.54051109519089,5.92622487583077,4.33247451110789,4.10082683163076,8.46479240864134,2.88963330989554,2.23922323717853,1.93479963326193,6.68269432610579,6.80122386199441,8.53941761932765,5.40026704109006,6.690825472463,3.9305261474312,3.77620169877498,2.39695021603474,6.54389854960074,4.79575401179634,4.34937519160848,6.20062232552609,5.23307911153926,6.783798108741,5.25018208528929,6.71631082084202,3.8859908862879,6.10257640957921,5.59878854828985,6.29156066554265,5.31485065817213,4.60848010012585,9.16432249821717,10.5417111950885,9.14127518766963,9.22437843142345,8.41425469637163,8.74197961037565,10.3368086587173,7.23678683155428,8.27924889574811,8.76378276532498,8.67105192176829,6.91950953252242,9.90981968895393,8.6488907614361,4.30787728868902,1.99787358036658,5.38283139656854,2.85403847818933,4.82973985080476,3.56596703357246,5.67770035228522,6.64541975145104,3.00943262421218,7.34177395402186,4.14292712856459,7.44764167471216,5.15559547031063,6.16574267793578,6.7985450765073,6.07520250208625,4.05289082901798,3.62513927187364,4.14208249401456,5.81209146471389,6.78342284781753,5.80494259564056,6.56388136084394,8.17491334249131,4.96377472815038,3.55594764482584,3.7086310303001,2.56735367673452,4.29585259998456,5.57654459758527,4.71565853465191,4.58843386602424,4.03358460150676,4.53740204749345,3.33405583898152,4.86714168968393,3.8581844092741,3.70877310722976,3.53277408322554,4.80016953339582,3.01708870470874,4.05341522910446,4.94177816549917,5.17601592284318,3.38458431566706,2.92684756596436,4.99832451731901,4.34573164306758,4.48913817326191,3.91495559809775,4.82671963640261,3.6830793885272,5.26785260032284,4.62975866354739,5.9954538705107,2.57324769289949,3.22306581072447,4.20834330551455,4.63241980150983,1.85494268496337
|short_description=p1@Dph2
}}

Latest revision as of 05:48, 26 September 2015

Short description:p1@Dph2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dph2_5end
Coexpression cluster:MCL_coexpression_mm9:155
Association with transcript: 0bp_to_ENSMUST00000030265, ENSMUST00000125781, ENSMUST00000139332, NM_026344, uc008ujd.1, uc008uje.1_5end
EntrezGene:Dph2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dph2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E732.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C314.57
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D99.47
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D76.23
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C66.26
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G86.47
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F76.47
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F88.80
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D96.29
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I29.14
thymus, embryo E16.CNhs11002.456-26C59.22
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F810.34
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C48.28
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E48.67
thymus, neonate N20.CNhs11186.820-7A26.92
thymus, neonate N25.CNhs11125.1362-25G79.91
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I85.81
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell4.05e-0712
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