FFCP PHASE1:Mm9::chr17:31569999..31570008,+: Difference between revisions
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{{FFCP|EntrezGene=18585|HGNC=|MCL_coexpression_id=24|UniProt=D3Z408|association_with_transcript=-7bp_to_ENSMUST00000136384_5end|description=CAGE_peak_6_at_Pde9a_5end|id=chr17:31569999..31570008,+|ontology_enrichment_celltype=CL:0002563!2.87e-09!9;CL:0002251!2.87e-09!9;CL:0000239!6.30e-09!6;CL:0000677!6.30e-09!6;CL:0000212!6.30e-09!6;CL:0000584!6.30e-09!6;CL:0000075!1.96e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.05e-25,6;CL:0000677,1.05e-25,6;CL:0000584,1.05e-25,6;CL:0000075,5.74e-22,7;CL:0002563,5.63e-17,9;CL:0002251,5.63e-17,9;CL:0002076,5.75e-10,15;CL:0000066,6.21e-10,25;CL:0000223,2.49e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.51e-16!15;UBERON:0000160!1.40e-14!43;UBERON:0001242!5.87e-14!13;UBERON:0000060!5.87e-14!13;UBERON:0001262!5.87e-14!13;UBERON:0004786!5.87e-14!13;UBERON:0005409!9.40e-13!59;UBERON:0004923!6.82e-11!24;UBERON:0003350!2.87e-09!9;UBERON:0004808!2.87e-09!9;UBERON:0001277!2.87e-09!9;UBERON:0000485!3.61e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.73e-38,15;UBERON:0000160,1.85e-35,31;UBERON:0001242,2.11e-31,13;UBERON:0001262,2.11e-31,13;UBERON:0004786,2.11e-31,13;UBERON:0004923,2.64e-23,24;UBERON:0005409,1.98e-22,47;UBERON:0003350,5.63e-17,9;UBERON:0004808,5.63e-17,9;UBERON:0001277,5.63e-17,9;UBERON:0002108,8.99e-17,4;UBERON:0000485,8.56e-14,11;UBERON:0000331,3.20e-13,3;UBERON:0002116,3.20e-13,3;UBERON:0001204,3.20e-13,3;UBERON:0001168,3.20e-13,3;UBERON:0001007,6.47e-11,116;UBERON:0001555,6.47e-11,116;UBERON:0007026,6.47e-11,116;UBERON:0004119,1.13e-10,118;UBERON:0000925,1.13e-10,118;UBERON:0006595,1.13e-10,118;UBERON:0001962,8.97e-09,2;UBERON:0001961,8.97e-09,2;UBERON:0001744,8.97e-09,2;UBERON:0004921,1.24e-08,114|phase1_expression=0,3.48975407639361,6.82498859084304,8.16653370528441,8.01433167914156,2.85394762250213,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.14704640533585,0.57423196411502,2.15380998079537,3.66301095566011,6.46079626151671,3.02436155711917,2.66076612786366,0,0,0,0,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,0,0,2.97376904685418,0,0,0,0.515469845288373,0.80673409849337,3.11329261382818,1.14135375667535,0.474529061544512,1.4822905925161,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,1.98475558249466,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.382576664137687,0,0|short_description=p6@Pde9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18585 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z408 | |||
|association_with_transcript=-7bp_to_ENSMUST00000136384_5end | |||
|cluster_id=chr17:31569999..31570008,+ | |||
|description=CAGE_peak_6_at_Pde9a_5end | |||
|id=chr17:31569999..31570008,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.87e-09!9;CL:0002251!2.87e-09!9;CL:0000239!6.30e-09!6;CL:0000677!6.30e-09!6;CL:0000212!6.30e-09!6;CL:0000584!6.30e-09!6;CL:0000075!1.96e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.05e-25,6;CL:0000677,1.05e-25,6;CL:0000584,1.05e-25,6;CL:0000075,5.74e-22,7;CL:0002563,5.63e-17,9;CL:0002251,5.63e-17,9;CL:0002076,5.75e-10,15;CL:0000066,6.21e-10,25;CL:0000223,2.49e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.51e-16!15;UBERON:0000160!1.40e-14!43;UBERON:0001242!5.87e-14!13;UBERON:0000060!5.87e-14!13;UBERON:0001262!5.87e-14!13;UBERON:0004786!5.87e-14!13;UBERON:0005409!9.40e-13!59;UBERON:0004923!6.82e-11!24;UBERON:0003350!2.87e-09!9;UBERON:0004808!2.87e-09!9;UBERON:0001277!2.87e-09!9;UBERON:0000485!3.61e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.73e-38,15;UBERON:0000160,1.85e-35,31;UBERON:0001242,2.11e-31,13;UBERON:0001262,2.11e-31,13;UBERON:0004786,2.11e-31,13;UBERON:0004923,2.64e-23,24;UBERON:0005409,1.98e-22,47;UBERON:0003350,5.63e-17,9;UBERON:0004808,5.63e-17,9;UBERON:0001277,5.63e-17,9;UBERON:0002108,8.99e-17,4;UBERON:0000485,8.56e-14,11;UBERON:0000331,3.20e-13,3;UBERON:0002116,3.20e-13,3;UBERON:0001204,3.20e-13,3;UBERON:0001168,3.20e-13,3;UBERON:0001007,6.47e-11,116;UBERON:0001555,6.47e-11,116;UBERON:0007026,6.47e-11,116;UBERON:0004119,1.13e-10,118;UBERON:0000925,1.13e-10,118;UBERON:0006595,1.13e-10,118;UBERON:0001962,8.97e-09,2;UBERON:0001961,8.97e-09,2;UBERON:0001744,8.97e-09,2;UBERON:0004921,1.24e-08,114 | |||
|phase1_expression=0,3.48975407639361,6.82498859084304,8.16653370528441,8.01433167914156,2.85394762250213,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.14704640533585,0.57423196411502,2.15380998079537,3.66301095566011,6.46079626151671,3.02436155711917,2.66076612786366,0,0,0,0,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,0,0,2.97376904685418,0,0,0,0.515469845288373,0.80673409849337,3.11329261382818,1.14135375667535,0.474529061544512,1.4822905925161,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,1.98475558249466,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.382576664137687,0,0 | |||
|short_description=p6@Pde9a | |||
}} |
Latest revision as of 05:48, 26 September 2015
Short description: | p6@Pde9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pde9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -7bp_to_ENSMUST00000136384_5end |
EntrezGene: | Pde9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.05e-25 | 6 |
gut absorptive cell | 1.05e-25 | 6 |
enterocyte | 1.05e-25 | 6 |
columnar/cuboidal epithelial cell | 5.74e-22 | 7 |
intestinal epithelial cell | 5.63e-17 | 9 |
epithelial cell of alimentary canal | 5.63e-17 | 9 |
endo-epithelial cell | 5.75e-10 | 15 |
epithelial cell | 6.21e-10 | 25 |
endodermal cell | 2.49e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.73e-38 | 15 |
intestine | 1.85e-35 | 31 |
intestinal mucosa | 2.11e-31 | 13 |
wall of intestine | 2.11e-31 | 13 |
gastrointestinal system mucosa | 2.11e-31 | 13 |
organ component layer | 2.64e-23 | 24 |
gastrointestinal system | 1.98e-22 | 47 |
epithelium of mucosa | 5.63e-17 | 9 |
gastrointestinal system epithelium | 5.63e-17 | 9 |
intestinal epithelium | 5.63e-17 | 9 |
small intestine | 8.99e-17 | 4 |
simple columnar epithelium | 8.56e-14 | 11 |
ileal mucosa | 3.20e-13 | 3 |
ileum | 3.20e-13 | 3 |
mucosa of small intestine | 3.20e-13 | 3 |
wall of small intestine | 3.20e-13 | 3 |
digestive system | 6.47e-11 | 116 |
digestive tract | 6.47e-11 | 116 |
primitive gut | 6.47e-11 | 116 |
endoderm-derived structure | 1.13e-10 | 118 |
endoderm | 1.13e-10 | 118 |
presumptive endoderm | 1.13e-10 | 118 |
gut-associated lymphoid tissue | 8.97e-09 | 2 |
mucosa-associated lymphoid tissue | 8.97e-09 | 2 |
lymphoid tissue | 8.97e-09 | 2 |
subdivision of digestive tract | 1.24e-08 | 114 |