FFCP PHASE1:Mm9::chr4:116667980..116667989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76608 | |EntrezGene=76608 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U487 | |UniProt=Q3U487 | ||
|association_with_transcript=27bp_to_NM_175244,uc008uht.1_5end | |association_with_transcript=27bp_to_NM_175244,uc008uht.1_5end | ||
|cluster_id=chr4:116667980..116667989,+ | |||
|description=CAGE_peak_3_at_Hectd3_5end | |description=CAGE_peak_3_at_Hectd3_5end | ||
|id=chr4:116667980..116667989,+ | |id=chr4:116667980..116667989,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.05e-16,6;CL:0000677,1.05e-16,6;CL:0000584,1.05e-16,6;CL:0000075,3.26e-14,7;CL:0000066,1.73e-11,25;CL:0002563,6.92e-11,9;CL:0002251,6.92e-11,9;CL:0000682,2.58e-09,3;CL:0000223,1.08e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.28e-09!15;UBERON:0000160!1.41e-08!43;UBERON:0001242!5.13e-08!13;UBERON:0000060!5.13e-08!13;UBERON:0001262!5.13e-08!13;UBERON:0004786!5.13e-08!13;UBERON:0004923!2.48e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.56e-27,31;UBERON:0000344,1.19e-24,15;UBERON:0001242,8.36e-20,13;UBERON:0001262,8.36e-20,13;UBERON:0004786,8.36e-20,13;UBERON:0005409,1.63e-16,47;UBERON:0004923,2.12e-14,24;UBERON:0003350,6.92e-11,9;UBERON:0004808,6.92e-11,9;UBERON:0001277,6.92e-11,9;UBERON:0002108,1.05e-10,4;UBERON:0001007,4.54e-09,116;UBERON:0001555,4.54e-09,116;UBERON:0007026,4.54e-09,116;UBERON:0004119,8.02e-09,118;UBERON:0000925,8.02e-09,118;UBERON:0006595,8.02e-09,118;UBERON:0000485,9.09e-09,11;UBERON:0000331,1.12e-08,3;UBERON:0002116,1.12e-08,3;UBERON:0001204,1.12e-08,3;UBERON:0001168,1.12e-08,3;UBERON:0004921,2.38e-07,114 | |||
|phase1_expression=0.320297694209588,4.53668029931169,9.09998478779072,14.8207463540347,13.5241847085514,1.34303417529512,3.03696432774183,0.129123323441576,0,0.468129052643987,0,0,0,0,0,0.809901069559304,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0.297872853602656,0.261199789138935,4.15980299262857,3.21172993494038,6.31655160526522,5.59990595006797,3.01659725760245,2.66032787238923,3.2763916868791,2.21730510655305,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,0.125896817975577,0.202753862439029,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,0,0.573066879877513,0,0.202316460859598,0,1.26766280701236,0,1.77858959222228,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0.931997229126503,0.302904773332736,0.529000920747499,0,0,0.679971333707751,2.69851595818909,0,2.24013443548668,0.561777680527007,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,1.37020655662872,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0.722996784599558,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,0.41889341362691,2.81002760729451,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.203678727700633,0.497627882440372,0.252722758433675,1.05220927943237,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0,0.0937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.568326998791185,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.268412837520744,0,0.308713837137853,3.63460661282178,2.64450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.380451252225118,1.89811624617805,1.81168850196412,0.502670417600539,0.596869416123452,0.974820435595601,5.39291645192533,2.37751854862164,1.99141273254367,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.505892296994058,0.738050739898011,0.31399745568275,1.1105744752962,1.48226313543574,0,0.786235980452812,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,1.92977408545347,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.938686832254841,0.21183207086382,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,1.45740418314925,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.686334519619568,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.129159823477731,1.01373675294467,0,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.188218760830661,0,0,0,0.271608227691724,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |phase1_expression=0.320297694209588,4.53668029931169,9.09998478779072,14.8207463540347,13.5241847085514,1.34303417529512,3.03696432774183,0.129123323441576,0,0.468129052643987,0,0,0,0,0,0.809901069559304,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0.297872853602656,0.261199789138935,4.15980299262857,3.21172993494038,6.31655160526522,5.59990595006797,3.01659725760245,2.66032787238923,3.2763916868791,2.21730510655305,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,0.125896817975577,0.202753862439029,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,0,0.573066879877513,0,0.202316460859598,0,1.26766280701236,0,1.77858959222228,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0.931997229126503,0.302904773332736,0.529000920747499,0,0,0.679971333707751,2.69851595818909,0,2.24013443548668,0.561777680527007,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,1.37020655662872,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0.722996784599558,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,0.41889341362691,2.81002760729451,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.203678727700633,0.497627882440372,0.252722758433675,1.05220927943237,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0,0.0937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.568326998791185,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.268412837520744,0,0.308713837137853,3.63460661282178,2.64450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.380451252225118,1.89811624617805,1.81168850196412,0.502670417600539,0.596869416123452,0.974820435595601,5.39291645192533,2.37751854862164,1.99141273254367,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.505892296994058,0.738050739898011,0.31399745568275,1.1105744752962,1.48226313543574,0,0.786235980452812,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,1.92977408545347,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.938686832254841,0.21183207086382,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,1.45740418314925,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.686334519619568,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.129159823477731,1.01373675294467,0,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.188218760830661,0,0,0,0.271608227691724,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p3@Hectd3 | |short_description=p3@Hectd3 | ||
}} | }} |
Latest revision as of 05:26, 26 September 2015
Short description: | p3@Hectd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hectd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 27bp_to_NM_175244, uc008uht.1_5end |
EntrezGene: | Hectd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.05e-16 | 6 |
gut absorptive cell | 1.05e-16 | 6 |
enterocyte | 1.05e-16 | 6 |
columnar/cuboidal epithelial cell | 3.26e-14 | 7 |
epithelial cell | 1.73e-11 | 25 |
intestinal epithelial cell | 6.92e-11 | 9 |
epithelial cell of alimentary canal | 6.92e-11 | 9 |
M cell of gut | 2.58e-09 | 3 |
endodermal cell | 1.08e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.56e-27 | 31 |
mucosa | 1.19e-24 | 15 |
intestinal mucosa | 8.36e-20 | 13 |
wall of intestine | 8.36e-20 | 13 |
gastrointestinal system mucosa | 8.36e-20 | 13 |
gastrointestinal system | 1.63e-16 | 47 |
organ component layer | 2.12e-14 | 24 |
epithelium of mucosa | 6.92e-11 | 9 |
gastrointestinal system epithelium | 6.92e-11 | 9 |
intestinal epithelium | 6.92e-11 | 9 |
small intestine | 1.05e-10 | 4 |
digestive system | 4.54e-09 | 116 |
digestive tract | 4.54e-09 | 116 |
primitive gut | 4.54e-09 | 116 |
endoderm-derived structure | 8.02e-09 | 118 |
endoderm | 8.02e-09 | 118 |
presumptive endoderm | 8.02e-09 | 118 |
simple columnar epithelium | 9.09e-09 | 11 |
ileal mucosa | 1.12e-08 | 3 |
ileum | 1.12e-08 | 3 |
mucosa of small intestine | 1.12e-08 | 3 |
wall of small intestine | 1.12e-08 | 3 |
subdivision of digestive tract | 2.38e-07 | 114 |