FFCP PHASE1:Mm9::chr17:29144806..29144817,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106504 | |EntrezGene=106504 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENSMUST00000145298_5end | |association_with_transcript=23bp_to_ENSMUST00000145298_5end | ||
|cluster_id=chr17:29144806..29144817,- | |||
|description=CAGE_peak_3_at_Stk38_5end | |description=CAGE_peak_3_at_Stk38_5end | ||
|id=chr17:29144806..29144817,- | |id=chr17:29144806..29144817,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.87e-09!29;UBERON:0002370!2.19e-08!23;UBERON:0000974!2.19e-08!23;UBERON:0004807!2.19e-08!23;UBERON:0005058!2.19e-08!23;UBERON:0003351!2.19e-08!23;UBERON:0009113!2.19e-08!23;UBERON:0003295!2.19e-08!23;UBERON:0009722!2.19e-08!23;UBERON:0005562!2.19e-08!23;UBERON:0007690!2.19e-08!23;UBERON:0003408!8.90e-08!24;UBERON:0006562!1.24e-07!24;UBERON:0001557!1.24e-07!24;UBERON:0001042!1.24e-07!24;UBERON:0008814!1.24e-07!24;UBERON:0009145!1.24e-07!24;UBERON:0002193!1.45e-07!48;UBERON:0002390!1.74e-07!45;UBERON:0003061!1.74e-07!45;UBERON:0000065!5.64e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.04e-09,29;UBERON:0005057,1.04e-09,29;UBERON:0002370,1.23e-08,23;UBERON:0000974,1.23e-08,23;UBERON:0004807,1.23e-08,23;UBERON:0005058,1.23e-08,23;UBERON:0003351,1.23e-08,23;UBERON:0009113,1.23e-08,23;UBERON:0003295,1.23e-08,23;UBERON:0009722,1.23e-08,23;UBERON:0005562,1.23e-08,23;UBERON:0007690,1.23e-08,23;UBERON:0000153,3.56e-08,43;UBERON:0007811,3.88e-08,36;UBERON:0003408,5.24e-08,24;UBERON:0006562,1.08e-07,24;UBERON:0001557,1.08e-07,24;UBERON:0001042,1.08e-07,24;UBERON:0008814,1.08e-07,24;UBERON:0009145,1.08e-07,24;UBERON:0002193,2.01e-07,48;UBERON:0002405,2.01e-07,48;UBERON:0002390,2.46e-07,45;UBERON:0003061,2.46e-07,45;UBERON:0000065,5.56e-07,41 | |||
|phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,1.20985684522732,0,2.01455126294268,1.40167584357315,16.0112921067555,6.19470377467334,7.95819389494778,1.36974374580404,1.83475965689274,16.7776715332582,19.8444313491124,0.666219523631325,2.63217847606774,0,6.62470547252299,8.77532375076728,4.2438965179803,4.16712121740242,5.06383851124515,1.82839852397255,1.59992422793407,1.83527424853736,1.72269589234506,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,1.10865255327652,1.27006134691926,1.23012957516914,0,2.88851619751275,1.16364251750945,1.22501613757421,11.3003540298965,4.6880120671428,4.18818995179039,9.99993529652724,10.9287277593351,8.25367600152961,1.25896817975577,1.31790010585369,1.28482726513177,0.782391344348039,0,0.219686182734472,0.58328969722285,0.55994568650145,0,4.53013036355888,18.859415692295,23.8626597391149,2.82985379639542,5.15760191889762,1.54701627683233,3.23706337375356,4.7609188134483,2.53532561402472,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,3.83651565541367,4.86021377994086,2.94454945891935,1.99955689082663,2.20868540951614,3.55223317723367,5.65488279007595,1.83843757322004,0,0.766124028511126,1.53606533256243,3.29715719325485,2.65314166446988,5.2091337055676,0.558365998002762,1.12552522006336,0.61119299110724,3.24091444021034,2.56269025438385,2.60959224155421,0.757261933331841,1.20914496170857,1.73918693221007,0,0,0,0,1.34408066129201,1.96622188184453,0.681721290312231,0.519572009205738,0.70667914902068,2.25349471642689,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,0.505524445014783,1.59857431606684,9.32176381129818,0.742210695324124,2.25530924795977,1.21786191324856,1.38369298353635,2.56228488939458,1.64624189989987,1.25666591329675,1.48316980640624,1.87979163995885,0,1.7794353494215,2.20841518460394,2.42437626567611,0,0.878342391034642,1.04723353406728,1.53274233125155,4.19352935770721,2.39961092397363,3.81210681219194,1.3481157546434,0,4.02093926761166,0.173824320192276,0.767146371990992,0.41557608911912,0.973447578406546,1.62942982160506,2.86136032403214,0.505445516867349,1.05220927943237,4.03373373184381,1.14951052216736,3.60124259610698,4.06903008156431,4.69451844144162,3.71529788826064,3.18585863503078,2.58703370739016,1.5089759505299,3.40390944302075,2.63926686245923,3.72632745126877,3.89266148915837,0,2.26360350048738,4.37875387000685,2.80885274925294,2.57347907114715,3.12579849335152,1.65700618028402,2.11073453982987,3.24111710629827,2.3674473558521,2.36117078096885,1.54267112887378,3.48800917125612,0.268273401399619,1.86824547787471,1.81015834904829,1.97000956894914,2.02672023864639,1.60819986167866,2.19550115291051,2.81833479396781,1.05144974282064,2.57261530948211,1.65209391491899,1.58670339998127,4.47905326123991,3.48355007790658,2.06187938115349,2.21851877085677,2.00140239460383,1.14135375667535,1.89811624617805,1.97638745668813,1.25667604400135,3.18330355265841,1.55971269695296,1.79763881730844,0.432276099749388,1.1948476395262,2.65535061334314,2.85621281524322,4.50830942692322,3.66572390121566,3.68509725618489,2.73529697572242,3.03535378196435,1.47610147979602,1.8839847340965,0.987177311374404,0.592905254174298,1.66845105716094,0.786235980452812,0.449724224769707,1.01430060694251,0.72353147925725,0.50925170356284,1.72617682470486,1.45921704097532,1.09824565275233,0,0.372140947668503,1.24815069245824,1.76805214562978,0.179397413521912,0.482443521363367,1.84753190166605,2.84237117655727,1.95557971730431,2.8856664581782,2.58159273117352,2.84760637651087,1.6663054862021,3.90267295715598,2.83743259391144,2.6575762757853,3.6674596791222,2.94953966488328,3.62638461918381,2.16973587872267,6.03165135757089,3.80733978673097,1.47529281905711,1.10374698521893,0.963303539926752,1.05490517932983,1.47541450839008,1.76729649043061,2.52406575533005,1.95219372148319,1.72338718186239,0.955875191810208,0.891194696329576,5.09537755419898,2.83367491172426,2.04579100537918,3.16230222357219,2.57057053137446,0.99358059645788,2.31485284767432,2.76907830901079,2.14461159864296,0,2.42780636154981,1.209294227859,2.26326095707078,0.885905678642318,0.614870295887855,1.29214146584111,0.363533729477506,2.13898427030833,1.58018378967908,2.10837217149998,1.03135543248187,0.340439605753788,2.70091641046965,3.62204314591713,2.57204442037911,4.25616560741457,2.49716344642899,3.45552943264454,1.522324745573,0.23467170806371,0.21183207086382,0.441056796109924,1.31909002353184,5.48979050766079,2.35220407219808,2.626191568069,2.1338316966858,2.04036585640896,0.741701208042039,1.87957968877638,4.33412422722767,3.33350149265481,2.63715839806567,4.64760374251486,2.74533807847827,2.37969801991397,3.91864066506242,3.04039942369732,1.90934123603023,3.16335993581135,2.03319467126849,1.72808545314882,2.09088296014469,2.40198820120795,2.15782954215713,1.65306911450672,1.04702376793612,0.777689839750757,1.24267862617385,7.89170114157866,4.03694674318743,4.30192075188454,2.52786544847262,2.0665571756437,2.70329800785245,2.69921648885234,2.21347454234715,2.51662426621706,6.28118714147616,7.20075015644664,8.84831137758899,3.44632865993279,3.90301637226344,4.93699127315621,6.80301443536429,6.75516606256301,10.9377859063172,10.485956429395,13.5295042930518,13.793432004555,15.3255801407998,13.0593560191268,13.0848104630848,17.6484122294169,0.906921534460845,0,0.807424709485281,0.335769232728157,0.772758376128762,1.50145980360946,1.83151624267265,1.50057865355346,0.501572104035363,1.12950368523413,1.84130094602871,0.572895513439397,0.859265911718438,0,1.5107877947794,0,0,0.906284817968409,1.03552062350364,2.90604573235695,1.99512436700516,3.75613932659095,1.94485373654635,2.30574478890781,1.47074806760011,0.44449345560323,1.44224540067226,0.962757628775446,1.76888048234658,2.28131369901216,1.88626341386076,2.52832070168682,2.36893063898016,2.81433797882505,2.85776214769844,2.66533949673168,2.70072908649187,2.47251540481984,2.50238164228475,3.08582327146874,1.4198064492747,2.62279808942053,1.45346416632329,2.25862512996793,2.62305284464197,2.37806364734604,0.789209134313529,2.17286582153379,0.561142271657738,1.54225523561426,2.56111654176465,2.45538625901814,2.63392630016142,3.08650577569826,0.499621155875892,2.10538447600868,2.14871054048298,1.53030665655075,1.32354851471709,1.15933917810211 | |phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,1.20985684522732,0,2.01455126294268,1.40167584357315,16.0112921067555,6.19470377467334,7.95819389494778,1.36974374580404,1.83475965689274,16.7776715332582,19.8444313491124,0.666219523631325,2.63217847606774,0,6.62470547252299,8.77532375076728,4.2438965179803,4.16712121740242,5.06383851124515,1.82839852397255,1.59992422793407,1.83527424853736,1.72269589234506,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,1.10865255327652,1.27006134691926,1.23012957516914,0,2.88851619751275,1.16364251750945,1.22501613757421,11.3003540298965,4.6880120671428,4.18818995179039,9.99993529652724,10.9287277593351,8.25367600152961,1.25896817975577,1.31790010585369,1.28482726513177,0.782391344348039,0,0.219686182734472,0.58328969722285,0.55994568650145,0,4.53013036355888,18.859415692295,23.8626597391149,2.82985379639542,5.15760191889762,1.54701627683233,3.23706337375356,4.7609188134483,2.53532561402472,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,3.83651565541367,4.86021377994086,2.94454945891935,1.99955689082663,2.20868540951614,3.55223317723367,5.65488279007595,1.83843757322004,0,0.766124028511126,1.53606533256243,3.29715719325485,2.65314166446988,5.2091337055676,0.558365998002762,1.12552522006336,0.61119299110724,3.24091444021034,2.56269025438385,2.60959224155421,0.757261933331841,1.20914496170857,1.73918693221007,0,0,0,0,1.34408066129201,1.96622188184453,0.681721290312231,0.519572009205738,0.70667914902068,2.25349471642689,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,0.505524445014783,1.59857431606684,9.32176381129818,0.742210695324124,2.25530924795977,1.21786191324856,1.38369298353635,2.56228488939458,1.64624189989987,1.25666591329675,1.48316980640624,1.87979163995885,0,1.7794353494215,2.20841518460394,2.42437626567611,0,0.878342391034642,1.04723353406728,1.53274233125155,4.19352935770721,2.39961092397363,3.81210681219194,1.3481157546434,0,4.02093926761166,0.173824320192276,0.767146371990992,0.41557608911912,0.973447578406546,1.62942982160506,2.86136032403214,0.505445516867349,1.05220927943237,4.03373373184381,1.14951052216736,3.60124259610698,4.06903008156431,4.69451844144162,3.71529788826064,3.18585863503078,2.58703370739016,1.5089759505299,3.40390944302075,2.63926686245923,3.72632745126877,3.89266148915837,0,2.26360350048738,4.37875387000685,2.80885274925294,2.57347907114715,3.12579849335152,1.65700618028402,2.11073453982987,3.24111710629827,2.3674473558521,2.36117078096885,1.54267112887378,3.48800917125612,0.268273401399619,1.86824547787471,1.81015834904829,1.97000956894914,2.02672023864639,1.60819986167866,2.19550115291051,2.81833479396781,1.05144974282064,2.57261530948211,1.65209391491899,1.58670339998127,4.47905326123991,3.48355007790658,2.06187938115349,2.21851877085677,2.00140239460383,1.14135375667535,1.89811624617805,1.97638745668813,1.25667604400135,3.18330355265841,1.55971269695296,1.79763881730844,0.432276099749388,1.1948476395262,2.65535061334314,2.85621281524322,4.50830942692322,3.66572390121566,3.68509725618489,2.73529697572242,3.03535378196435,1.47610147979602,1.8839847340965,0.987177311374404,0.592905254174298,1.66845105716094,0.786235980452812,0.449724224769707,1.01430060694251,0.72353147925725,0.50925170356284,1.72617682470486,1.45921704097532,1.09824565275233,0,0.372140947668503,1.24815069245824,1.76805214562978,0.179397413521912,0.482443521363367,1.84753190166605,2.84237117655727,1.95557971730431,2.8856664581782,2.58159273117352,2.84760637651087,1.6663054862021,3.90267295715598,2.83743259391144,2.6575762757853,3.6674596791222,2.94953966488328,3.62638461918381,2.16973587872267,6.03165135757089,3.80733978673097,1.47529281905711,1.10374698521893,0.963303539926752,1.05490517932983,1.47541450839008,1.76729649043061,2.52406575533005,1.95219372148319,1.72338718186239,0.955875191810208,0.891194696329576,5.09537755419898,2.83367491172426,2.04579100537918,3.16230222357219,2.57057053137446,0.99358059645788,2.31485284767432,2.76907830901079,2.14461159864296,0,2.42780636154981,1.209294227859,2.26326095707078,0.885905678642318,0.614870295887855,1.29214146584111,0.363533729477506,2.13898427030833,1.58018378967908,2.10837217149998,1.03135543248187,0.340439605753788,2.70091641046965,3.62204314591713,2.57204442037911,4.25616560741457,2.49716344642899,3.45552943264454,1.522324745573,0.23467170806371,0.21183207086382,0.441056796109924,1.31909002353184,5.48979050766079,2.35220407219808,2.626191568069,2.1338316966858,2.04036585640896,0.741701208042039,1.87957968877638,4.33412422722767,3.33350149265481,2.63715839806567,4.64760374251486,2.74533807847827,2.37969801991397,3.91864066506242,3.04039942369732,1.90934123603023,3.16335993581135,2.03319467126849,1.72808545314882,2.09088296014469,2.40198820120795,2.15782954215713,1.65306911450672,1.04702376793612,0.777689839750757,1.24267862617385,7.89170114157866,4.03694674318743,4.30192075188454,2.52786544847262,2.0665571756437,2.70329800785245,2.69921648885234,2.21347454234715,2.51662426621706,6.28118714147616,7.20075015644664,8.84831137758899,3.44632865993279,3.90301637226344,4.93699127315621,6.80301443536429,6.75516606256301,10.9377859063172,10.485956429395,13.5295042930518,13.793432004555,15.3255801407998,13.0593560191268,13.0848104630848,17.6484122294169,0.906921534460845,0,0.807424709485281,0.335769232728157,0.772758376128762,1.50145980360946,1.83151624267265,1.50057865355346,0.501572104035363,1.12950368523413,1.84130094602871,0.572895513439397,0.859265911718438,0,1.5107877947794,0,0,0.906284817968409,1.03552062350364,2.90604573235695,1.99512436700516,3.75613932659095,1.94485373654635,2.30574478890781,1.47074806760011,0.44449345560323,1.44224540067226,0.962757628775446,1.76888048234658,2.28131369901216,1.88626341386076,2.52832070168682,2.36893063898016,2.81433797882505,2.85776214769844,2.66533949673168,2.70072908649187,2.47251540481984,2.50238164228475,3.08582327146874,1.4198064492747,2.62279808942053,1.45346416632329,2.25862512996793,2.62305284464197,2.37806364734604,0.789209134313529,2.17286582153379,0.561142271657738,1.54225523561426,2.56111654176465,2.45538625901814,2.63392630016142,3.08650577569826,0.499621155875892,2.10538447600868,2.14871054048298,1.53030665655075,1.32354851471709,1.15933917810211 | ||
|short_description=p3@Stk38 | |short_description=p3@Stk38 | ||
}} | }} |
Latest revision as of 04:45, 26 September 2015
Short description: | p3@Stk38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stk38_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 23bp_to_ENSMUST00000145298_5end |
EntrezGene: | Stk38 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.04e-09 | 29 |
immune organ | 1.04e-09 | 29 |
thymus | 1.23e-08 | 23 |
neck | 1.23e-08 | 23 |
respiratory system epithelium | 1.23e-08 | 23 |
hemolymphoid system gland | 1.23e-08 | 23 |
pharyngeal epithelium | 1.23e-08 | 23 |
thymic region | 1.23e-08 | 23 |
pharyngeal gland | 1.23e-08 | 23 |
entire pharyngeal arch endoderm | 1.23e-08 | 23 |
thymus primordium | 1.23e-08 | 23 |
early pharyngeal endoderm | 1.23e-08 | 23 |
anterior region of body | 3.56e-08 | 43 |
craniocervical region | 3.88e-08 | 36 |
gland of gut | 5.24e-08 | 24 |
pharynx | 1.08e-07 | 24 |
upper respiratory tract | 1.08e-07 | 24 |
chordate pharynx | 1.08e-07 | 24 |
pharyngeal arch system | 1.08e-07 | 24 |
pharyngeal region of foregut | 1.08e-07 | 24 |
hemolymphoid system | 2.01e-07 | 48 |
immune system | 2.01e-07 | 48 |
hematopoietic system | 2.46e-07 | 45 |
blood island | 2.46e-07 | 45 |
respiratory tract | 5.56e-07 | 41 |