Personal tools

FFCP PHASE1:Mm9::chr19:8913788..8913836,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:8913788..8913836,+
|DHSsupport=NA
|short_description=p7@Bscl2
|DPIdataset=NA
|description=CAGE_peak_7_at_Bscl2_5end
|association_with_transcript=0bp_to_ENSMUST00000160556,NM_008144,uc008gnj.2_5end
|EntrezGene=14705
|EntrezGene=14705
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9Z2E9
|UniProt=Q9Z2E9
|association_with_transcript=0bp_to_ENSMUST00000160556,NM_008144,uc008gnj.2_5end
|cluster_id=chr19:8913788..8913836,+
|description=CAGE_peak_7_at_Bscl2_5end
|id=chr19:8913788..8913836,+
|ontology_enrichment_celltype=CL:0000117!9.14e-15!23;CL:0000337!9.14e-15!23;CL:0002319!9.47e-15!43;CL:0000221!9.97e-15!44;CL:0000133!9.97e-15!44;CL:0000540!9.77e-14!33;CL:0000047!9.77e-14!33;CL:0000031!9.77e-14!33;CL:0000404!9.77e-14!33;CL:0000055!1.30e-10!50;CL:0000393!9.54e-10!39;CL:0000211!9.54e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-23,23;CL:0000337,1.48e-23,23;CL:0000540,1.05e-17,33;CL:0000047,1.05e-17,33;CL:0000031,1.05e-17,33;CL:0000404,1.05e-17,33;CL:0000393,5.00e-14,39;CL:0000211,5.00e-14,39;CL:0002319,2.41e-13,43;CL:0000221,6.72e-13,44;CL:0000133,6.72e-13,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.16e-38!71;UBERON:0003075!1.16e-38!71;UBERON:0007284!1.16e-38!71;UBERON:0001017!4.77e-38!73;UBERON:0005743!4.77e-38!73;UBERON:0000073!1.33e-37!75;UBERON:0001016!1.33e-37!75;UBERON:0004121!6.14e-36!102;UBERON:0000924!6.14e-36!102;UBERON:0006601!6.14e-36!102;UBERON:0001049!3.50e-33!52;UBERON:0005068!3.50e-33!52;UBERON:0006241!3.50e-33!52;UBERON:0007135!3.50e-33!52;UBERON:0000955!1.89e-32!50;UBERON:0006238!1.89e-32!50;UBERON:0002616!1.15e-31!49;UBERON:0000033!4.42e-31!63;UBERON:0003056!1.84e-25!49;UBERON:0003080!8.15e-25!40;UBERON:0002780!6.18e-24!39;UBERON:0001890!6.18e-24!39;UBERON:0006240!6.18e-24!39;UBERON:0002020!1.18e-22!34;UBERON:0002791!1.50e-19!29;UBERON:0003528!1.50e-19!29;UBERON:0001893!1.50e-19!29;UBERON:0007811!4.99e-17!86;UBERON:0000153!3.06e-15!94;UBERON:0000956!2.39e-14!21;UBERON:0001869!2.39e-14!21;UBERON:0000203!2.39e-14!21;UBERON:0002619!2.45e-12!17;UBERON:0002021!1.89e-09!10;UBERON:0000411!1.89e-09!10;UBERON:0001950!1.89e-09!10;UBERON:0003076!1.39e-08!12;UBERON:0003057!1.39e-08!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.51e-49,54;UBERON:0001017,1.23e-46,73;UBERON:0001049,8.71e-46,52;UBERON:0005068,8.71e-46,52;UBERON:0006241,8.71e-46,52;UBERON:0007135,8.71e-46,52;UBERON:0001016,4.79e-45,75;UBERON:0002346,6.32e-41,64;UBERON:0003075,6.32e-41,64;UBERON:0007284,6.32e-41,64;UBERON:0000955,2.66e-39,47;UBERON:0006238,2.66e-39,47;UBERON:0002616,6.79e-38,46;UBERON:0004121,3.26e-36,95;UBERON:0000924,3.26e-36,95;UBERON:0006601,3.26e-36,95;UBERON:0002020,6.44e-36,34;UBERON:0010371,2.21e-34,73;UBERON:0003080,3.72e-32,40;UBERON:0002780,1.40e-30,39;UBERON:0001890,1.40e-30,39;UBERON:0006240,1.40e-30,39;UBERON:0003528,7.46e-30,29;UBERON:0002791,7.46e-30,29;UBERON:0001893,7.46e-30,29;UBERON:0003056,2.26e-28,49;UBERON:0010314,1.49e-27,92;UBERON:0000956,7.99e-20,21;UBERON:0001869,7.99e-20,21;UBERON:0000203,7.99e-20,21;UBERON:0002619,9.54e-20,17;UBERON:0002021,3.85e-17,10;UBERON:0000411,3.85e-17,10;UBERON:0001950,3.85e-17,10;UBERON:0000025,1.24e-14,114;UBERON:0003076,2.53e-13,12;UBERON:0003057,2.53e-13,12;UBERON:0004111,6.09e-13,122;UBERON:0002420,4.05e-11,8;UBERON:0007245,4.05e-11,8;UBERON:0010009,4.05e-11,8;UBERON:0010011,4.05e-11,8;UBERON:0000454,4.05e-11,8;UBERON:0011216,1.81e-09,194;UBERON:0002240,1.82e-08,6;UBERON:0005174,1.82e-08,6;UBERON:0001137,1.82e-08,6;UBERON:0000483,1.35e-07,174;UBERON:0000119,2.20e-07,176;UBERON:0002950,2.61e-07,4;UBERON:0001891,2.61e-07,4;UBERON:0009616,2.61e-07,4;UBERON:0010286,2.61e-07,4;UBERON:0001948,4.66e-07,5;UBERON:0002315,4.66e-07,5;UBERON:0000369,5.47e-07,5;UBERON:0002435,5.47e-07,5;UBERON:0000204,5.47e-07,5;UBERON:0010082,5.47e-07,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0.219686182734472,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,0.622137673850866,2.16009501330705,0.841299845405528,2.28520787523043,3.75476519617743,2.08234358665422,2.39613677545591,4.5960939330501,45.1475112097494,24.1329068981005,27.0347498530989,2.1101806036831,1.55528994124096,2.08365348222704,26.8015679041326,15.757353080887,19.7109739632085,3.24091444021034,3.98640706237488,1.67759501242771,0,0.755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,2.52351636410202,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,21.0802173848314,11.51956887474,0.255457055208591,0,0,0,27.861058929297,22.8750301409313,2.63874139437015,30.5930803538407,18.4115129277838,23.6878370797899,14.9261962022337,0,0,0,3.57751155007006,0.130120442962704,0.229902104433473,0.360124259610698,0,0.204109497453984,0.640568601424249,0.187403449119458,5.69147415625834,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,24.814213930567,2.26390147234426,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,26.6513979379735,19.9259867206745,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.222798674082394,0,0,0.876767573733936,1.18586333383957,15.7447445046685,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,6.80879211507576,0.18006109403131,0.258717367565509,0.428674070063185,1.24138163549592,0.891844088010353,0.987294123612726,3.65357938937519,0,0.21183207086382,0.882113592219848,0,0.161464426695906,0,0,0,0,23.3635880533242,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,23.1548255472997,23.476587061866,22.9158205375759,24.9187114398347,30.1436308699083,40.7912704590438,27.675922509504,47.7340475417674,31.2668262199101,31.583379016861,0.103787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,0.377252682772152,0.37456602987953,0.576226371643824,0.574354689556133,1.42888107384922,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,1.06485483695602,0.476872379894642,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0,0.407412341537585,1.12228454331548,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0.219686182734472,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,0.622137673850866,2.16009501330705,0.841299845405528,2.28520787523043,3.75476519617743,2.08234358665422,2.39613677545591,4.5960939330501,45.1475112097494,24.1329068981005,27.0347498530989,2.1101806036831,1.55528994124096,2.08365348222704,26.8015679041326,15.757353080887,19.7109739632085,3.24091444021034,3.98640706237488,1.67759501242771,0,0.755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,2.52351636410202,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,21.0802173848314,11.51956887474,0.255457055208591,0,0,0,27.861058929297,22.8750301409313,2.63874139437015,30.5930803538407,18.4115129277838,23.6878370797899,14.9261962022337,0,0,0,3.57751155007006,0.130120442962704,0.229902104433473,0.360124259610698,0,0.204109497453984,0.640568601424249,0.187403449119458,5.69147415625834,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,24.814213930567,2.26390147234426,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,26.6513979379735,19.9259867206745,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.222798674082394,0,0,0.876767573733936,1.18586333383957,15.7447445046685,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,6.80879211507576,0.18006109403131,0.258717367565509,0.428674070063185,1.24138163549592,0.891844088010353,0.987294123612726,3.65357938937519,0,0.21183207086382,0.882113592219848,0,0.161464426695906,0,0,0,0,23.3635880533242,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,23.1548255472997,23.476587061866,22.9158205375759,24.9187114398347,30.1436308699083,40.7912704590438,27.675922509504,47.7340475417674,31.2668262199101,31.583379016861,0.103787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,0.377252682772152,0.37456602987953,0.576226371643824,0.574354689556133,1.42888107384922,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,1.06485483695602,0.476872379894642,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0,0.407412341537585,1.12228454331548,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p7@Bscl2
}}
}}

Latest revision as of 04:44, 26 September 2015

Short description:p7@Bscl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Bscl2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000160556, NM_008144, uc008gnj.2_5end
EntrezGene:Bscl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Bscl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.08
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.86
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D530.59
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E824.81
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C226.65
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C923.36
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.48e-2323
neuroblast (sensu Vertebrata)1.48e-2323
neuron1.05e-1733
neuronal stem cell1.05e-1733
neuroblast1.05e-1733
electrically signaling cell1.05e-1733
electrically responsive cell5.00e-1439
electrically active cell5.00e-1439
neural cell2.41e-1343
ectodermal cell6.72e-1344
neurectodermal cell6.72e-1344

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.51e-4954
central nervous system1.23e-4673
neural tube8.71e-4652
neural rod8.71e-4652
future spinal cord8.71e-4652
neural keel8.71e-4652
nervous system4.79e-4575
neurectoderm6.32e-4164
neural plate6.32e-4164
presumptive neural plate6.32e-4164
brain2.66e-3947
future brain2.66e-3947
regional part of brain6.79e-3846
ectoderm-derived structure3.26e-3695
ectoderm3.26e-3695
presumptive ectoderm3.26e-3695
gray matter6.44e-3634
ecto-epithelium2.21e-3473
anterior neural tube3.72e-3240
regional part of forebrain1.40e-3039
forebrain1.40e-3039
future forebrain1.40e-3039
brain grey matter7.46e-3029
regional part of telencephalon7.46e-3029
telencephalon7.46e-3029
pre-chordal neural plate2.26e-2849
structure with developmental contribution from neural crest1.49e-2792
cerebral cortex7.99e-2021
cerebral hemisphere7.99e-2021
pallium7.99e-2021
regional part of cerebral cortex9.54e-2017
occipital lobe3.85e-1710
visual cortex3.85e-1710
neocortex3.85e-1710
tube1.24e-14114
posterior neural tube2.53e-1312
chordal neural plate2.53e-1312
anatomical conduit6.09e-13122
basal ganglion4.05e-118
nuclear complex of neuraxis4.05e-118
aggregate regional part of brain4.05e-118
collection of basal ganglia4.05e-118
cerebral subcortex4.05e-118
organ system subdivision1.81e-09194
spinal cord1.82e-086
dorsal region element1.82e-086
dorsum1.82e-086
epithelium1.35e-07174
cell layer2.20e-07176
regional part of midbrain2.61e-074
midbrain2.61e-074
presumptive midbrain2.61e-074
midbrain neural tube2.61e-074
regional part of spinal cord4.66e-075
gray matter of spinal cord4.66e-075
corpus striatum5.47e-075
striatum5.47e-075
ventral part of telencephalon5.47e-075
future corpus striatum5.47e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:8913788..8913836,%2B&oldid=4233864"