FFCP PHASE1:Mm9::chr4:114598669..114598674,-: Difference between revisions
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{{FFCP|EntrezGene=30923|HGNC=|MCL_coexpression_id=133|UniProt=Q9QY14|association_with_transcript=-12bp_to_ENSMUST00000050940_5end|description=CAGE_peak_1_at_Foxe3_5end|id=chr4:114598669..114598674,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.27e-24!9;UBERON:0000019!1.27e-24!9;UBERON:0000047!1.27e-24!9;UBERON:0004088!1.27e-24!9;UBERON:0002104!1.27e-24!9;UBERON:0001456!1.27e-24!9;UBERON:0003072!1.27e-24!9;UBERON:0003071!1.27e-24!9;UBERON:0004128!1.27e-24!9;UBERON:0001444!8.29e-20!11;UBERON:0000020!5.30e-18!12;UBERON:0001032!5.30e-18!12;UBERON:0004456!5.30e-18!12;UBERON:0005085!1.79e-16!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.71e-71,9;UBERON:0000019,2.71e-71,9;UBERON:0000047,2.71e-71,9;UBERON:0010312,2.71e-71,9;UBERON:0004088,2.71e-71,9;UBERON:0002104,2.71e-71,9;UBERON:0001456,2.71e-71,9;UBERON:0003072,2.71e-71,9;UBERON:0004128,2.71e-71,9;UBERON:0003071,2.71e-71,9;UBERON:0001444,2.74e-58,11;UBERON:0000020,2.08e-53,12;UBERON:0001032,2.08e-53,12;UBERON:0004456,2.08e-53,12;UBERON:0000033,2.81e-49,13;UBERON:0005085,2.81e-49,13;UBERON:0007811,1.63e-17,36;UBERON:0003056,9.26e-16,49;UBERON:0000153,1.43e-14,43;UBERON:0002346,6.60e-12,64;UBERON:0003075,6.60e-12,64;UBERON:0007284,6.60e-12,64;UBERON:0010371,2.39e-10,73;UBERON:0010314,4.79e-08,92;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15662783829711,33.1807129554894,28.7377630541841,38.3532336485394,15.9747106905858,10.8178033650611,7.17436833595159,10.1197862524507,8.79591460512653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2634823597847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,1.24905288968973,0,0.429742108096597,0,0,0|short_description=p1@Foxe3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30923 | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QY14 | |||
|association_with_transcript=-12bp_to_ENSMUST00000050940_5end | |||
|cluster_id=chr4:114598669..114598674,- | |||
|description=CAGE_peak_1_at_Foxe3_5end | |||
|id=chr4:114598669..114598674,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.27e-24!9;UBERON:0000019!1.27e-24!9;UBERON:0000047!1.27e-24!9;UBERON:0004088!1.27e-24!9;UBERON:0002104!1.27e-24!9;UBERON:0001456!1.27e-24!9;UBERON:0003072!1.27e-24!9;UBERON:0003071!1.27e-24!9;UBERON:0004128!1.27e-24!9;UBERON:0001444!8.29e-20!11;UBERON:0000020!5.30e-18!12;UBERON:0001032!5.30e-18!12;UBERON:0004456!5.30e-18!12;UBERON:0005085!1.79e-16!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.71e-71,9;UBERON:0000019,2.71e-71,9;UBERON:0000047,2.71e-71,9;UBERON:0010312,2.71e-71,9;UBERON:0004088,2.71e-71,9;UBERON:0002104,2.71e-71,9;UBERON:0001456,2.71e-71,9;UBERON:0003072,2.71e-71,9;UBERON:0004128,2.71e-71,9;UBERON:0003071,2.71e-71,9;UBERON:0001444,2.74e-58,11;UBERON:0000020,2.08e-53,12;UBERON:0001032,2.08e-53,12;UBERON:0004456,2.08e-53,12;UBERON:0000033,2.81e-49,13;UBERON:0005085,2.81e-49,13;UBERON:0007811,1.63e-17,36;UBERON:0003056,9.26e-16,49;UBERON:0000153,1.43e-14,43;UBERON:0002346,6.60e-12,64;UBERON:0003075,6.60e-12,64;UBERON:0007284,6.60e-12,64;UBERON:0010371,2.39e-10,73;UBERON:0010314,4.79e-08,92;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15662783829711,33.1807129554894,28.7377630541841,38.3532336485394,15.9747106905858,10.8178033650611,7.17436833595159,10.1197862524507,8.79591460512653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2634823597847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,1.24905288968973,0,0.429742108096597,0,0,0 | |||
|short_description=p1@Foxe3 | |||
}} |
Latest revision as of 04:22, 26 September 2015
Short description: | p1@Foxe3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxe3_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | -12bp_to_ENSMUST00000050940_5end |
EntrezGene: | Foxe3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.71e-71 | 9 |
camera-type eye | 2.71e-71 | 9 |
simple eye | 2.71e-71 | 9 |
immature eye | 2.71e-71 | 9 |
ocular region | 2.71e-71 | 9 |
visual system | 2.71e-71 | 9 |
face | 2.71e-71 | 9 |
optic cup | 2.71e-71 | 9 |
optic vesicle | 2.71e-71 | 9 |
eye primordium | 2.71e-71 | 9 |
subdivision of head | 2.74e-58 | 11 |
sense organ | 2.08e-53 | 12 |
sensory system | 2.08e-53 | 12 |
entire sense organ system | 2.08e-53 | 12 |
head | 2.81e-49 | 13 |
ectodermal placode | 2.81e-49 | 13 |
craniocervical region | 1.63e-17 | 36 |
pre-chordal neural plate | 9.26e-16 | 49 |
anterior region of body | 1.43e-14 | 43 |
neurectoderm | 6.60e-12 | 64 |
neural plate | 6.60e-12 | 64 |
presumptive neural plate | 6.60e-12 | 64 |
ecto-epithelium | 2.39e-10 | 73 |
structure with developmental contribution from neural crest | 4.79e-08 | 92 |
ectoderm-derived structure | 9.14e-08 | 95 |
ectoderm | 9.14e-08 | 95 |
presumptive ectoderm | 9.14e-08 | 95 |