FFCP PHASE1:Mm9::chr10:61885146..61885157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216019 | |EntrezGene=216019 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000159579_5end | |association_with_transcript=0bp_to_ENSMUST00000159579_5end | ||
|cluster_id=chr10:61885146..61885157,- | |||
|description=CAGE_peak_2_at_Hkdc1_5end | |description=CAGE_peak_2_at_Hkdc1_5end | ||
|id=chr10:61885146..61885157,- | |id=chr10:61885146..61885157,- | ||
|ontology_enrichment_celltype=CL:0002563!1.12e-07!9;CL:0002251!1.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.90e-11,6;CL:0000677,2.90e-11,6;CL:0000584,2.90e-11,6;CL:0000075,1.59e-09,7;CL:0002563,2.78e-09,9;CL:0002251,2.78e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.83e-22!43;UBERON:0005409!1.23e-21!59;UBERON:0000344!1.17e-12!15;UBERON:0001242!4.12e-11!13;UBERON:0000060!4.12e-11!13;UBERON:0001262!4.12e-11!13;UBERON:0004786!4.12e-11!13;UBERON:0004119!2.55e-10!130;UBERON:0000925!2.55e-10!130;UBERON:0006595!2.55e-10!130;UBERON:0001007!3.60e-10!128;UBERON:0001555!3.60e-10!128;UBERON:0007026!3.60e-10!128;UBERON:0004921!3.39e-09!126;UBERON:0004185!3.39e-09!126;UBERON:0004923!7.00e-09!24;UBERON:0003350!1.12e-07!9;UBERON:0004808!1.12e-07!9;UBERON:0001277!1.12e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.14e-35,31;UBERON:0005409,1.21e-26,47;UBERON:0000344,5.92e-19,15;UBERON:0001242,6.99e-16,13;UBERON:0001262,6.99e-16,13;UBERON:0004786,6.99e-16,13;UBERON:0004923,1.27e-12,24;UBERON:0001007,3.82e-10,116;UBERON:0001555,3.82e-10,116;UBERON:0007026,3.82e-10,116;UBERON:0004119,7.89e-10,118;UBERON:0000925,7.89e-10,118;UBERON:0006595,7.89e-10,118;UBERON:0003350,2.78e-09,9;UBERON:0004808,2.78e-09,9;UBERON:0001277,2.78e-09,9;UBERON:0004921,1.03e-08,114;UBERON:0002108,2.09e-08,4;UBERON:0000485,2.23e-07,11 | |||
|phase1_expression=0,8.37540978334467,7.27998783023258,14.215817931421,21.5385163876929,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.23970448894286,3.67054849707472,6.89078356938024,3.4460959692726,3.01659725760245,10.2612646506442,10.5852654499171,2.88249663851896,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0.304465478312141,0,0,0,0,11.1237735480468,0,0,0,0,0,0,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,1.20563854268572,2.31324097114515,6.14945857367279,5.43470002446427,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,20.8163833279793,3.70230793328962,0.213288250535234,0.232236671860439,1.15980715189884,1.61346819698674,3.7804267453628,4.37518940058886,7.59246498471219,4.77626968699632,4.02136334080431,3.58121649674071,1.36474860983384,10.7858329038507,8.42938394511308,9.55878111620963,0.189667900953082,0.456994050438915,0,0,0,0.210407459670956,0.126473074248515,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0.449724224769707,0.608580364165509,1.92941727801933,2.5462585178142,0.863088412352432,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0,0.837531287209079,0.238043640886014,0.585400943573396,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.81394134178851,4.33791683438566,6.79194353625777,6.14870295887855,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0.119372344003136,0,9.32738677215522,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,1.21991680276109,0.86404272657441,0.627264888043406,2.18362563746178,0.404593039154462,0.41326727862668,0,6.35113369129785,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.551530525350042,1.11123363900808,1.03017528619447,0.64183841918363,0.758091635291392,0,0.377252682772152,0.468207537349412,0.768301828858431,0.287177344778066,0.476293691283074,0.463537303779422,0.38581844092741,0,0.588795680537589,1.02860775715625,0.532427418478012,0.238436189947321,0.581385666529314,0.564656282491984,0.507687647350059,0.548783918618318,1.57841826862706,0.407412341537585,1.68342681497322,0.830445126869219,0.591026894253381,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,8.37540978334467,7.27998783023258,14.215817931421,21.5385163876929,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.23970448894286,3.67054849707472,6.89078356938024,3.4460959692726,3.01659725760245,10.2612646506442,10.5852654499171,2.88249663851896,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0.304465478312141,0,0,0,0,11.1237735480468,0,0,0,0,0,0,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,1.20563854268572,2.31324097114515,6.14945857367279,5.43470002446427,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,20.8163833279793,3.70230793328962,0.213288250535234,0.232236671860439,1.15980715189884,1.61346819698674,3.7804267453628,4.37518940058886,7.59246498471219,4.77626968699632,4.02136334080431,3.58121649674071,1.36474860983384,10.7858329038507,8.42938394511308,9.55878111620963,0.189667900953082,0.456994050438915,0,0,0,0.210407459670956,0.126473074248515,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0.449724224769707,0.608580364165509,1.92941727801933,2.5462585178142,0.863088412352432,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0,0.837531287209079,0.238043640886014,0.585400943573396,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.81394134178851,4.33791683438566,6.79194353625777,6.14870295887855,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0.119372344003136,0,9.32738677215522,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,1.21991680276109,0.86404272657441,0.627264888043406,2.18362563746178,0.404593039154462,0.41326727862668,0,6.35113369129785,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.551530525350042,1.11123363900808,1.03017528619447,0.64183841918363,0.758091635291392,0,0.377252682772152,0.468207537349412,0.768301828858431,0.287177344778066,0.476293691283074,0.463537303779422,0.38581844092741,0,0.588795680537589,1.02860775715625,0.532427418478012,0.238436189947321,0.581385666529314,0.564656282491984,0.507687647350059,0.548783918618318,1.57841826862706,0.407412341537585,1.68342681497322,0.830445126869219,0.591026894253381,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p2@Hkdc1 | |short_description=p2@Hkdc1 | ||
}} | }} |
Latest revision as of 04:22, 26 September 2015
Short description: | p2@Hkdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hkdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000159579_5end |
EntrezGene: | Hkdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.90e-11 | 6 |
gut absorptive cell | 2.90e-11 | 6 |
enterocyte | 2.90e-11 | 6 |
columnar/cuboidal epithelial cell | 1.59e-09 | 7 |
intestinal epithelial cell | 2.78e-09 | 9 |
epithelial cell of alimentary canal | 2.78e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.14e-35 | 31 |
gastrointestinal system | 1.21e-26 | 47 |
mucosa | 5.92e-19 | 15 |
intestinal mucosa | 6.99e-16 | 13 |
wall of intestine | 6.99e-16 | 13 |
gastrointestinal system mucosa | 6.99e-16 | 13 |
organ component layer | 1.27e-12 | 24 |
digestive system | 3.82e-10 | 116 |
digestive tract | 3.82e-10 | 116 |
primitive gut | 3.82e-10 | 116 |
endoderm-derived structure | 7.89e-10 | 118 |
endoderm | 7.89e-10 | 118 |
presumptive endoderm | 7.89e-10 | 118 |
epithelium of mucosa | 2.78e-09 | 9 |
gastrointestinal system epithelium | 2.78e-09 | 9 |
intestinal epithelium | 2.78e-09 | 9 |
subdivision of digestive tract | 1.03e-08 | 114 |
small intestine | 2.09e-08 | 4 |
simple columnar epithelium | 2.23e-07 | 11 |