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FFCP PHASE1:Mm9::chr17:27957479..27957517,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=224647
|EntrezGene=224647
|HGNC=
|HGNC=
|MCL_coexpression_id=175
|TSSclassifier=NA
|UniProt=B2KF52,A2RT11,Q3TT38,B2KF54
|UniProt=B2KF52,A2RT11,Q3TT38,B2KF54
|association_with_transcript=0bp_to_ENSMUST00000075076,ENSMUST00000114863,NM_001033279,NM_001044719,uc008bpp.1,uc008bpq.1,uc008bpr.1_5end
|association_with_transcript=0bp_to_ENSMUST00000075076,ENSMUST00000114863,NM_001033279,NM_001044719,uc008bpp.1,uc008bpq.1,uc008bpr.1_5end
|cluster_id=chr17:27957479..27957517,-
|description=CAGE_peak_1_at_D17Wsu92e_5end
|description=CAGE_peak_1_at_D17Wsu92e_5end
|id=chr17:27957479..27957517,-
|id=chr17:27957479..27957517,-
|ontology_enrichment_celltype=CL:0000066!1.97e-08!25;CL:0000223!1.84e-07!20;CL:0000063!5.38e-07!66
|ontology_enrichment_celltype=CL:0000066!1.97e-08!25;CL:0000223!1.84e-07!20;CL:0000063!5.38e-07!66
|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-08,25;CL:0000223,1.84e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0001007!8.33e-10!128;UBERON:0001555!8.33e-10!128;UBERON:0007026!8.33e-10!128;UBERON:0004921!1.56e-09!126;UBERON:0004185!1.56e-09!126;UBERON:0002365!2.30e-09!25;UBERON:0002330!2.30e-09!25;UBERON:0009854!7.32e-09!23;UBERON:0009856!7.32e-09!23;UBERON:0002107!9.37e-09!22;UBERON:0007499!9.37e-09!22;UBERON:0006925!9.37e-09!22;UBERON:0009497!9.37e-09!22;UBERON:0000015!9.37e-09!22;UBERON:0002423!9.37e-09!22;UBERON:0006235!9.37e-09!22;UBERON:0008835!9.37e-09!22;UBERON:0003894!9.37e-09!22;UBERON:0004161!9.37e-09!22;UBERON:0008836!9.37e-09!22;UBERON:0000160!3.54e-08!43;UBERON:0005409!7.85e-08!59;UBERON:0005172!1.00e-07!49;UBERON:0005173!1.00e-07!49;UBERON:0002417!1.00e-07!49;UBERON:0000916!1.00e-07!49
|ontology_enrichment_uberon=UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0001007!8.33e-10!128;UBERON:0001555!8.33e-10!128;UBERON:0007026!8.33e-10!128;UBERON:0004921!1.56e-09!126;UBERON:0004185!1.56e-09!126;UBERON:0002365!2.30e-09!25;UBERON:0002330!2.30e-09!25;UBERON:0009854!7.32e-09!23;UBERON:0009856!7.32e-09!23;UBERON:0002107!9.37e-09!22;UBERON:0007499!9.37e-09!22;UBERON:0006925!9.37e-09!22;UBERON:0009497!9.37e-09!22;UBERON:0000015!9.37e-09!22;UBERON:0002423!9.37e-09!22;UBERON:0006235!9.37e-09!22;UBERON:0008835!9.37e-09!22;UBERON:0003894!9.37e-09!22;UBERON:0004161!9.37e-09!22;UBERON:0008836!9.37e-09!22;UBERON:0000160!3.54e-08!43;UBERON:0005409!7.85e-08!59;UBERON:0005172!1.00e-07!49;UBERON:0005173!1.00e-07!49;UBERON:0002417!1.00e-07!49;UBERON:0000916!1.00e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.01e-09,118;UBERON:0000925,2.01e-09,118;UBERON:0006595,2.01e-09,118;UBERON:0002365,2.30e-09,25;UBERON:0002330,2.30e-09,25;UBERON:0001007,5.53e-09,116;UBERON:0001555,5.53e-09,116;UBERON:0007026,5.53e-09,116;UBERON:0009854,7.32e-09,23;UBERON:0009856,7.32e-09,23;UBERON:0002107,9.37e-09,22;UBERON:0007499,9.37e-09,22;UBERON:0006925,9.37e-09,22;UBERON:0009497,9.37e-09,22;UBERON:0000015,9.37e-09,22;UBERON:0002423,9.37e-09,22;UBERON:0006235,9.37e-09,22;UBERON:0008835,9.37e-09,22;UBERON:0003894,9.37e-09,22;UBERON:0004161,9.37e-09,22;UBERON:0008836,9.37e-09,22;UBERON:0004921,9.96e-09,114;UBERON:0000160,2.76e-08,31;UBERON:0005172,1.00e-07,49;UBERON:0005173,1.00e-07,49;UBERON:0002417,1.00e-07,49;UBERON:0000916,1.00e-07,49;UBERON:0005409,1.68e-07,47
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034715341708,6.06356058441959,9.38959024108564,10.3845546716312,16.4480376893418,14.6583327511057,16.4611016080577,14.9121435140862,8.45539408026285,3.73791365109947,4.79829622325583,4.27792614356905,4.64975364519832,6.25137664315879,6.10257640957921,8.85389816938861,10.3810750981454,6.03960302065015,10.0810502190253,6.32022241256356,3.64905387522296,2.97861775777999,4.28738715826724,3.40150721768215,2.98022032171897,6.25016337503838,6.05527061415767,6.15895344683701,6.17275133905499,4.03304740547362,6.1398464866044,5.29165129021812,7.59699864180198,13.6038230169127,12.6531993423217,9.240527230776,13.4307693091263,13.7164611762855,15.5776454624481,6.59345847362154,9.86094543763703,22.5707446815914,9.03602948187307,10.1271552031579,8.02053718815155,8.93636548187176,10.9613203163303,11.3309084608455,12.8254275044043,11.7083512838297,8.15656336171568,13.4617681055473,2.90604573235695,5.1873233542134,4.78054096111576,4.132814190161,4.82110274044359,6.25067928730048,4.4449345560323,6.59312183164461,4.49286893428541,6.31743029409494,8.11133759648767,5.09291121742406,6.64854703036165,7.93911889820379,8.44301393647515,3.81034953026459,9.15486174964358,5.98018583437486,11.5384052224926,5.7407578852415,6.51451579532289,5.6792257970988,6.19934093863034,8.57543858130738,7.52875043322645,6.51532480765909,6.76833499629258,7.10288220882176,7.06181391998481,6.73370725989286,7.59264115994714,8.56988996667402,9.82154503607254,5.73266312388074,6.94463799532109,4.99621155875892,7.48581147025307,12.6773921888496,8.7992632751668,8.16188250742207,9.27471342481686
|phase1_expression=8.0074423552397,26.5221309805914,32.7599452360466,45.9745601186382,48.0859900748493,18.4667199103079,12.3814699515629,3.74457637980571,19.2880549347783,20.5976783163354,16.265706981423,20.6609891797921,6.50562773738582,4.45844052336887,10.6595123781012,13.7683181825082,21.6864182219725,10.4102514568218,9.32378148519024,5.94145512517242,12.246233781754,2.38298282882125,1.82839852397255,9.11956809922418,11.6998733344257,28.711598205751,23.6919097887491,17.6686410802429,11.0213583284697,13.3575968772763,10.4213340007993,6.35030673459631,7.99584223859941,31.6963362030877,14.1537293678125,11.6364251750945,14.7001936508906,9.62622750694888,7.813353445238,3.14114246384279,7.05877785637217,8.19654581950135,9.71020706062307,3.14742044938943,3.24406179902447,5.87349606917381,10.1710874765245,5.01457859675027,4.61340983742391,6.41618666945135,5.03951117851305,4.31257693094915,12.751478060388,17.4086914082723,11.7632829699862,4.88792928468299,3.15186783932632,6.18806510732931,1.82084814773638,1.5869729378161,1.90149421051854,6.43804610931351,10.6715375533337,19.3478439215501,13.8441290759376,17.0515227587064,10.1864037576258,12.2949857702897,1.8664130215526,1.4850653216486,0.841299845405528,4.57041575046086,3.3130281142742,1.5923803897944,2.01275489138296,0,6.60695285996332,7.15049093277051,7.83393319606842,1.31886287730194,2.8361169516747,2.6045668527838,6.70039197603314,3.93933827022176,5.19514042441154,3.53554302568401,2.98980529678116,2.23679334990361,10.677393259979,6.65029728939713,14.7830889237856,39.5794983411438,80.9165887112223,52.8909127805061,62.3785360749762,64.9638986291137,25.7013288841106,3.91989741929533,1.81850203222008,4.59341446863442,7.46470124816407,7.69958864485907,15.2883143823987,7.11066703153331,9.09262372247099,9.88103475352884,10.1104889002957,39.1650707436376,11.6522047641227,20.0396887737513,8.50078101154066,10.0473607843007,15.2206228188999,14.3186508524991,12.5819916635204,20.3579877954074,17.3036477414062,17.930320258069,11.4999371753484,6.63244084784378,8.61281921995535,8.727754556434,11.1835056730873,5.5628351432194,5.65506108396329,16.860165643767,8.74650408893218,6.59893004092748,6.4805815807263,5.39246301857362,5.49000723382352,3.39266750704734,10.6032835317289,10.9957646652042,5.40248915854856,6.48965052271031,5.29564692021645,8.70848794270651,7.32895999457657,11.1534183619831,3.6433724029557,3.90833577536904,3.42118046630164,3.46621081022145,4.35433594568498,3.33095672740609,3.84177070694888,5.95017752699736,1.72454394346274,3.02569728268511,4.04687585577082,2.84954452155847,4.44875598760957,3.1342694986995,5.76189981942242,1.99034266818493,6.31991868581911,3.86021860672073,6.53576048609863,1.86413195281952,3.75241695969754,4.50155153652537,6.39210786080068,6.09969118416952,4.01094493507183,3.72054311600653,5.36546802799238,6.889155199663,7.24063339619314,7.38753588355929,9.64718833595683,8.62579925809461,9.00155472693308,9.66286215074677,8.62188789112922,3.39585220851639,27.4247589876552,21.4204958997471,1.91959425481711,4.41249676534833,6.95884291139304,9.88249270654378,7.11609740303585,11.7939888189787,22.7773949541366,19.9285735216053,19.604146286421,16.9113001234978,12.8676297498619,16.178749355776,14.0489732418551,19.7149860521824,3.79335801906163,3.65595240351132,5.63538678365402,3.05476991767971,4.07300223052014,9.95928642442524,9.35900749439008,19.9273699772463,17.583857518234,26.6537874071089,62.2550516883013,5.6727335943472,8.05891879964132,5.8464149220062,9.73728582664814,11.3353265083636,10.9489116266011,12.9463261852865,26.1037715107807,19.7684217495419,37.3797336971122,29.0269939181433,27.7713529071959,36.118779546437,34.803098223251,69.4718670763249,9.23765950833023,1.89491411770485,2.60743962307241,3.05541154395339,3.28566347603903,4.85768146581266,5.2369600994923,12.0982861671835,4.57141917907954,7.75126413770712,5.58091690301205,5.40748938561935,9.67035898449015,9.69148692496127,15.0791283939272,28.8270012423916,12.7858710984949,10.4855963595798,6.42202359951168,7.501547941901,6.22952792431367,19.6927323219411,6.31016438832513,4.68526493155966,5.81643173878557,5.4962823529087,5.34716817797746,6.51076020814315,6.8817819284732,4.9683495844923,7.51046778098395,5.78378369559253,7.66476460124651,3.02711526234334,6.51547837414304,9.07335676348945,15.9294166007955,4.37005145078967,5.13950046840077,7.35559811048003,12.1073776081117,12.2974059177571,11.3708448994017,6.5436071305951,8.55593708123331,11.0612865277536,10.5418608574999,18.5643977846736,7.83011093233712,1.98067203434441,3.75140182969988,3.85806663056866,6.20690817747958,5.17269571046005,4.77192159746151,7.30715877875038,21.1204537257339,9.10877904714427,30.6534473296397,14.6748765117917,10.8181165886257,10.9769523369244,13.0115854963419,13.6236946788401,17.7803310344209,6.86073617438886,11.2774781326583,4.95328483111734,6.66700298530962,8.66494902221579,11.072232445403,12.5827995263587,11.728511669576,14.9748053986314,14.7873971970733,11.4560474161814,2.68885594543965,5.28630614529807,7.02034715341708,6.06356058441959,9.38959024108564,10.3845546716312,16.4480376893418,14.6583327511057,16.4611016080577,14.9121435140862,8.45539408026285,3.73791365109947,4.79829622325583,4.27792614356905,4.64975364519832,6.25137664315879,6.10257640957921,8.85389816938861,10.3810750981454,6.03960302065015,10.0810502190253,6.32022241256356,3.64905387522296,2.97861775777999,4.28738715826724,3.40150721768215,2.98022032171897,6.25016337503838,6.05527061415767,6.15895344683701,6.17275133905499,4.03304740547362,6.1398464866044,5.29165129021812,7.59699864180198,13.6038230169127,12.6531993423217,9.240527230776,13.4307693091263,13.7164611762855,15.5776454624481,6.59345847362154,9.86094543763703,22.5707446815914,9.03602948187307,10.1271552031579,8.02053718815155,8.93636548187176,10.9613203163303,11.3309084608455,12.8254275044043,11.7083512838297,8.15656336171568,13.4617681055473,2.90604573235695,5.1873233542134,4.78054096111576,4.132814190161,4.82110274044359,6.25067928730048,4.4449345560323,6.59312183164461,4.49286893428541,6.31743029409494,8.11133759648767,5.09291121742406,6.64854703036165,7.93911889820379,8.44301393647515,3.81034953026459,9.15486174964358,5.98018583437486,11.5384052224926,5.7407578852415,6.51451579532289,5.6792257970988,6.19934093863034,8.57543858130738,7.52875043322645,6.51532480765909,6.76833499629258,7.10288220882176,7.06181391998481,6.73370725989286,7.59264115994714,8.56988996667402,9.82154503607254,5.73266312388074,6.94463799532109,4.99621155875892,7.48581147025307,12.6773921888496,8.7992632751668,8.16188250742207,9.27471342481686
|short_description=p1@D17Wsu92e
|short_description=p1@D17Wsu92e
}}
}}

Latest revision as of 03:48, 26 September 2015

Short description:p1@D17Wsu92e
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_D17Wsu92e_5end
Coexpression cluster:MCL_coexpression_mm9:175
Association with transcript: 0bp_to_ENSMUST00000075076, ENSMUST00000114863, NM_001033279, NM_001044719, uc008bpp.1, uc008bpq.1, uc008bpr.1_5end
EntrezGene:D17Wsu92e
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@D17Wsu92e

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I632.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.97
CD326+ enterocyte, pool2.CNhs13197.11849-124I448.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.38
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.77
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A521.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I123.69
GP2+ M cell, pool3.CNhs13240.11847-124I217.67
Ileum epithelium, pool1.CNhs13199.10252-104B911.02
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.75
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D910.68
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C852.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F462.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F664.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.17
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D720.04
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F514.32
adrenal gland, neonate N00.CNhs11191.1311-23C112.58
adrenal gland, neonate N25.CNhs11223.1377-27I320.36
amnion, adult pregnant day17.5.CNhs10488.583-22A817.30
aorta, adult.CNhs10498.46-23H117.93
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H716.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G411.15
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I27.24
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G19.65
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D29.66
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I327.42
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D86.96
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E919.93
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G119.71
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G79.96
kidney, neonate N10.CNhs11206.758-6D59.36
kidney, neonate N20.CNhs11113.832-19I119.93
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H126.65
liver, adult pregnant day01.CNhs10466.508-5B262.26
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D79.74
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G219.77
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H229.03
liver, neonate N10.CNhs11115.751-24B927.77
liver, neonate N20.CNhs11220.823-25A336.12
liver, neonate N25.CNhs11198.1368-26H134.80
liver, neonate N30.CNhs11106.1382-42D169.47
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C612.10
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H210.49
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I721.12
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F830.65
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H310.98
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C413.62
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G211.28
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D18.66
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G312.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.79
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A916.45
stomach, neonate N25.CNhs11104.1355-25E414.66
stomach, neonate N30.CNhs11134.1386-42I116.46
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I48.85
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D36.17
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G75.29
thymus, neonate N30.CNhs11132.1393-42G27.60
tongue, adult.CNhs10499.32-1B413.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.43
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F822.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.97e-0825
endodermal cell1.84e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.01e-09118
endoderm2.01e-09118
presumptive endoderm2.01e-09118
exocrine gland2.30e-0925
exocrine system2.30e-0925
digestive system5.53e-09116
digestive tract5.53e-09116
primitive gut5.53e-09116
digestive tract diverticulum7.32e-0923
sac7.32e-0923
liver9.37e-0922
epithelial sac9.37e-0922
digestive gland9.37e-0922
epithelium of foregut-midgut junction9.37e-0922
anatomical boundary9.37e-0922
hepatobiliary system9.37e-0922
foregut-midgut junction9.37e-0922
hepatic diverticulum9.37e-0922
liver primordium9.37e-0922
septum transversum9.37e-0922
liver bud9.37e-0922
subdivision of digestive tract9.96e-09114
intestine2.76e-0831
abdomen element1.00e-0749
abdominal segment element1.00e-0749
abdominal segment of trunk1.00e-0749
abdomen1.00e-0749
gastrointestinal system1.68e-0747
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