FFCP PHASE1:Mm9::chr4:107552410..107552428,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:107552410..107552428,+
|short_description=p2@Magoh
|description=CAGE_peak_2_at_Magoh_5end
|association_with_transcript=0bp_to_NM_010760,uc008uaj.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17149 | |EntrezGene=17149 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=659 | |||
|TSSclassifier=NA | |||
|UniProt=P61327 | |UniProt=P61327 | ||
|association_with_transcript=0bp_to_NM_010760,uc008uaj.1_5end | |||
|cluster_id=chr4:107552410..107552428,+ | |||
|description=CAGE_peak_2_at_Magoh_5end | |||
|id=chr4:107552410..107552428,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.40e-08!13;CL:0000051!7.40e-08!13;CL:0000838!1.80e-07!12;CL:0000084!4.52e-07!11;CL:0000827!4.52e-07!11;CL:0000988!6.37e-07!32;CL:0002032!6.37e-07!32;CL:0000037!6.37e-07!32;CL:0000566!6.37e-07!32;CL:0000837!6.37e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.40e-08,13;CL:0000051,7.40e-08,13;CL:0000838,1.80e-07,12;CL:0000084,4.52e-07,11;CL:0000827,4.52e-07,11;CL:0000988,6.37e-07,32;CL:0002032,6.37e-07,32;CL:0000037,6.37e-07,32;CL:0000837,6.37e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.34e-07!29;UBERON:0002370!5.84e-07!23;UBERON:0000974!5.84e-07!23;UBERON:0004807!5.84e-07!23;UBERON:0005058!5.84e-07!23;UBERON:0003351!5.84e-07!23;UBERON:0009113!5.84e-07!23;UBERON:0003295!5.84e-07!23;UBERON:0009722!5.84e-07!23;UBERON:0005562!5.84e-07!23;UBERON:0007690!5.84e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.07e-07,43;UBERON:0004177,4.34e-07,29;UBERON:0005057,4.34e-07,29;UBERON:0002370,5.84e-07,23;UBERON:0000974,5.84e-07,23;UBERON:0004807,5.84e-07,23;UBERON:0005058,5.84e-07,23;UBERON:0003351,5.84e-07,23;UBERON:0009113,5.84e-07,23;UBERON:0003295,5.84e-07,23;UBERON:0009722,5.84e-07,23;UBERON:0005562,5.84e-07,23;UBERON:0007690,5.84e-07,23 | |||
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| ||
|short_description=p2@Magoh | |||
}} | }} |
Latest revision as of 03:09, 26 September 2015
Short description: | p2@Magoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Magoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:659 |
Association with transcript: | 0bp_to_NM_010760, uc008uaj.1_5end |
EntrezGene: | Magoh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.40e-08 | 13 |
common lymphoid progenitor | 7.40e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.80e-07 | 12 |
T cell | 4.52e-07 | 11 |
pro-T cell | 4.52e-07 | 11 |
hematopoietic cell | 6.37e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.37e-07 | 32 |
hematopoietic stem cell | 6.37e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 4.07e-07 | 43 |
hemopoietic organ | 4.34e-07 | 29 |
immune organ | 4.34e-07 | 29 |
thymus | 5.84e-07 | 23 |
neck | 5.84e-07 | 23 |
respiratory system epithelium | 5.84e-07 | 23 |
hemolymphoid system gland | 5.84e-07 | 23 |
pharyngeal epithelium | 5.84e-07 | 23 |
thymic region | 5.84e-07 | 23 |
pharyngeal gland | 5.84e-07 | 23 |
entire pharyngeal arch endoderm | 5.84e-07 | 23 |
thymus primordium | 5.84e-07 | 23 |
early pharyngeal endoderm | 5.84e-07 | 23 |