FFCP PHASE1:Mm9::chr17:24835165..24835197,+: Difference between revisions
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|id=chr17:24835165..24835197,+
|short_description=p3@Noxo1
|description=CAGE_peak_3_at_Noxo1_5end
|association_with_transcript=0bp_to_ENSMUST00000123026,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71893 | |EntrezGene=71893 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1705 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000123026,ENSMUST00000124864,uc008axu.2_5end | |||
|cluster_id=chr17:24835165..24835197,+ | |||
|description=CAGE_peak_3_at_Noxo1_5end | |||
|id=chr17:24835165..24835197,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.44e-08!9;CL:0002251!3.44e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.45e-16,9;CL:0002251,1.45e-16,9;CL:0000066,8.34e-14,25;CL:0000075,2.66e-12,7;CL:0002076,5.96e-11,15;CL:0000239,8.08e-11,6;CL:0000677,8.08e-11,6;CL:0000584,8.08e-11,6;CL:0000223,1.19e-07,20;CL:0002250,2.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.40e-22!59;UBERON:0000160!1.18e-20!43;UBERON:0000344!9.39e-13!15;UBERON:0001242!3.17e-11!13;UBERON:0000060!3.17e-11!13;UBERON:0001262!3.17e-11!13;UBERON:0004786!3.17e-11!13;UBERON:0000485!1.69e-09!11;UBERON:0004119!8.63e-09!130;UBERON:0000925!8.63e-09!130;UBERON:0006595!8.63e-09!130;UBERON:0001007!9.23e-09!128;UBERON:0001555!9.23e-09!128;UBERON:0007026!9.23e-09!128;UBERON:0003350!3.44e-08!9;UBERON:0004808!3.44e-08!9;UBERON:0001277!3.44e-08!9;UBERON:0004921!7.17e-08!126;UBERON:0004185!7.17e-08!126;UBERON:0004923!1.74e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.25e-46,31;UBERON:0005409,6.59e-41,47;UBERON:0000344,6.50e-27,15;UBERON:0001242,1.93e-23,13;UBERON:0001262,1.93e-23,13;UBERON:0004786,1.93e-23,13;UBERON:0000485,1.60e-19,11;UBERON:0003350,1.45e-16,9;UBERON:0004808,1.45e-16,9;UBERON:0001277,1.45e-16,9;UBERON:0004923,3.02e-15,24;UBERON:0001007,3.66e-15,116;UBERON:0001555,3.66e-15,116;UBERON:0007026,3.66e-15,116;UBERON:0004119,9.68e-15,118;UBERON:0000925,9.68e-15,118;UBERON:0006595,9.68e-15,118;UBERON:0004921,2.73e-13,114;UBERON:0002108,7.38e-09,4;UBERON:0000331,3.79e-07,3;UBERON:0002116,3.79e-07,3;UBERON:0001204,3.79e-07,3;UBERON:0001168,3.79e-07,3 | |||
|phase1_expression=6.88640042550614,9.42233600626275,8.64498554840118,4.23449895829562,3.00537437967808,8.39396359559449,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,9.11956809922418,15.5998311125676,16.6527269593356,6.8921919385452,11.8509177977239,23.1828571736776,17.1380488236753,18.4036323843903,0,0,0,30.0405684541326,27.5949511295097,32.054588933192,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,7.74638808771743,0,0,0,1.08245520505607,0.760079596425296,0,0.79928715803342,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,18.6391761218122,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.468508622798644,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,3.70230793328962,0.213288250535234,0,1.15980715189884,2.62188582010345,3.33567065767305,8.17970192284004,10.9141684155238,3.95277491337626,6.78605063760728,9.35095418593409,7.99352757188393,10.7858329038507,11.4553166433588,10.1562049359727,0,0,1.1270773567308,0,0,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,2.48343071674259,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.99358059645788,0,0.162886959353576,0.824850614862677,0,0.485561272309963,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0.661585194164886,0.32977250588296,0,0.301564624640779,0.358117032009409,0.820704498725306,11.3677526285642,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0,0.609958401380546,1.08005340821801,0.836353184057875,1.74690050996942,1.21377911746339,0.743881101528023,1.30877970992015,9.0730481304255,1.24267862617385,0,0,0.496375471371293,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0,0.188626341386076,0.280924522409647,0.448176066834085,0.631790158511746,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.70990322463735,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0,0.263069711437843,0.407412341537585,2.24456908663095,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,0.964533054905707,1.24905288968973,1.40358965067245,0.429742108096597,0.57386499620653,0,0.231867835620421 | |phase1_expression=6.88640042550614,9.42233600626275,8.64498554840118,4.23449895829562,3.00537437967808,8.39396359559449,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,9.11956809922418,15.5998311125676,16.6527269593356,6.8921919385452,11.8509177977239,23.1828571736776,17.1380488236753,18.4036323843903,0,0,0,30.0405684541326,27.5949511295097,32.054588933192,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,7.74638808771743,0,0,0,1.08245520505607,0.760079596425296,0,0.79928715803342,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,18.6391761218122,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.468508622798644,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,3.70230793328962,0.213288250535234,0,1.15980715189884,2.62188582010345,3.33567065767305,8.17970192284004,10.9141684155238,3.95277491337626,6.78605063760728,9.35095418593409,7.99352757188393,10.7858329038507,11.4553166433588,10.1562049359727,0,0,1.1270773567308,0,0,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,2.48343071674259,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.99358059645788,0,0.162886959353576,0.824850614862677,0,0.485561272309963,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0.661585194164886,0.32977250588296,0,0.301564624640779,0.358117032009409,0.820704498725306,11.3677526285642,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0,0.609958401380546,1.08005340821801,0.836353184057875,1.74690050996942,1.21377911746339,0.743881101528023,1.30877970992015,9.0730481304255,1.24267862617385,0,0,0.496375471371293,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0,0.188626341386076,0.280924522409647,0.448176066834085,0.631790158511746,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.70990322463735,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0,0.263069711437843,0.407412341537585,2.24456908663095,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,0.964533054905707,1.24905288968973,1.40358965067245,0.429742108096597,0.57386499620653,0,0.231867835620421 | ||
|short_description=p3@Noxo1 | |||
}} | }} |
Latest revision as of 01:45, 26 September 2015
Short description: | p3@Noxo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Noxo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1705 |
Association with transcript: | 0bp_to_ENSMUST00000123026, ENSMUST00000124864, uc008axu.2_5end |
EntrezGene: | Noxo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.45e-16 | 9 |
epithelial cell of alimentary canal | 1.45e-16 | 9 |
epithelial cell | 8.34e-14 | 25 |
columnar/cuboidal epithelial cell | 2.66e-12 | 7 |
endo-epithelial cell | 5.96e-11 | 15 |
brush border epithelial cell | 8.08e-11 | 6 |
gut absorptive cell | 8.08e-11 | 6 |
enterocyte | 8.08e-11 | 6 |
endodermal cell | 1.19e-07 | 20 |
intestinal crypt stem cell | 2.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.25e-46 | 31 |
gastrointestinal system | 6.59e-41 | 47 |
mucosa | 6.50e-27 | 15 |
intestinal mucosa | 1.93e-23 | 13 |
wall of intestine | 1.93e-23 | 13 |
gastrointestinal system mucosa | 1.93e-23 | 13 |
simple columnar epithelium | 1.60e-19 | 11 |
epithelium of mucosa | 1.45e-16 | 9 |
gastrointestinal system epithelium | 1.45e-16 | 9 |
intestinal epithelium | 1.45e-16 | 9 |
organ component layer | 3.02e-15 | 24 |
digestive system | 3.66e-15 | 116 |
digestive tract | 3.66e-15 | 116 |
primitive gut | 3.66e-15 | 116 |
endoderm-derived structure | 9.68e-15 | 118 |
endoderm | 9.68e-15 | 118 |
presumptive endoderm | 9.68e-15 | 118 |
subdivision of digestive tract | 2.73e-13 | 114 |
small intestine | 7.38e-09 | 4 |
ileal mucosa | 3.79e-07 | 3 |
ileum | 3.79e-07 | 3 |
mucosa of small intestine | 3.79e-07 | 3 |
wall of small intestine | 3.79e-07 | 3 |