FFCP PHASE1:Mm9::chr14:54769010..54769018,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q5R1A2 | |UniProt=Q5R1A2 | ||
|association_with_transcript=-41bp_to_uc007ttz.1_5end | |association_with_transcript=-41bp_to_uc007ttz.1_5end | ||
|cluster_id=chr14:54769010..54769018,- | |||
|description=CAGE_peak_4_at_uc007ttz.1_5end | |description=CAGE_peak_4_at_uc007ttz.1_5end | ||
|id=chr14:54769010..54769018,- | |id=chr14:54769010..54769018,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.45e-28!23;UBERON:0000974!1.45e-28!23;UBERON:0004807!1.45e-28!23;UBERON:0005058!1.45e-28!23;UBERON:0003351!1.45e-28!23;UBERON:0009113!1.45e-28!23;UBERON:0003295!1.45e-28!23;UBERON:0009722!1.45e-28!23;UBERON:0005562!1.45e-28!23;UBERON:0007690!1.45e-28!23;UBERON:0006562!2.77e-27!24;UBERON:0003408!2.77e-27!24;UBERON:0001557!2.77e-27!24;UBERON:0001042!2.77e-27!24;UBERON:0008814!2.77e-27!24;UBERON:0009145!2.77e-27!24;UBERON:0004177!1.06e-25!29;UBERON:0000072!5.25e-24!27;UBERON:0000063!5.82e-21!35;UBERON:0002193!5.65e-17!48;UBERON:0002390!1.07e-15!45;UBERON:0003061!1.07e-15!45;UBERON:0000065!4.89e-15!41;UBERON:0001004!1.26e-14!42;UBERON:0005057!1.47e-13!51;UBERON:0002405!8.40e-11!70;UBERON:0003929!1.26e-10!55;UBERON:0002368!1.51e-09!60;UBERON:0003081!2.68e-09!88;UBERON:0000064!3.23e-09!99;UBERON:0002530!1.23e-08!65;UBERON:0000490!1.81e-08!66;UBERON:0005911!5.32e-08!69;UBERON:0000949!1.43e-07!72 | |ontology_enrichment_uberon=UBERON:0002370!1.45e-28!23;UBERON:0000974!1.45e-28!23;UBERON:0004807!1.45e-28!23;UBERON:0005058!1.45e-28!23;UBERON:0003351!1.45e-28!23;UBERON:0009113!1.45e-28!23;UBERON:0003295!1.45e-28!23;UBERON:0009722!1.45e-28!23;UBERON:0005562!1.45e-28!23;UBERON:0007690!1.45e-28!23;UBERON:0006562!2.77e-27!24;UBERON:0003408!2.77e-27!24;UBERON:0001557!2.77e-27!24;UBERON:0001042!2.77e-27!24;UBERON:0008814!2.77e-27!24;UBERON:0009145!2.77e-27!24;UBERON:0004177!1.06e-25!29;UBERON:0000072!5.25e-24!27;UBERON:0000063!5.82e-21!35;UBERON:0002193!5.65e-17!48;UBERON:0002390!1.07e-15!45;UBERON:0003061!1.07e-15!45;UBERON:0000065!4.89e-15!41;UBERON:0001004!1.26e-14!42;UBERON:0005057!1.47e-13!51;UBERON:0002405!8.40e-11!70;UBERON:0003929!1.26e-10!55;UBERON:0002368!1.51e-09!60;UBERON:0003081!2.68e-09!88;UBERON:0000064!3.23e-09!99;UBERON:0002530!1.23e-08!65;UBERON:0000490!1.81e-08!66;UBERON:0005911!5.32e-08!69;UBERON:0000949!1.43e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-18,1;UBERON:0001097,2.59e-18,1;UBERON:0003968,2.59e-18,1;UBERON:0001467,2.59e-18,1;UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002465,5.46e-07,3;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,1.07416017400489,1.58945083825012,1.08175904567972,0.886137163047463,0.605798699688886,1.295515713135,0.705783295957884,0.877120926657772,0.865906574762965,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,1.07416017400489,1.58945083825012,1.08175904567972,0.886137163047463,0.605798699688886,1.295515713135,0.705783295957884,0.877120926657772,0.865906574762965,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@uc007ttz.1 | |short_description=p4@uc007ttz.1 | ||
}} | }} |
Latest revision as of 01:45, 26 September 2015
Short description: | p4@uc007ttz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc007ttz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -41bp_to_uc007ttz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 2.59e-18 | 1 |
axillary lymph node | 2.59e-18 | 1 |
peripheral lymph node | 2.59e-18 | 1 |
shoulder | 2.59e-18 | 1 |
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
lymphoid system | 5.46e-07 | 3 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |