FFCP PHASE1:Mm9::chr9:103014379..103014386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270192 | |EntrezGene=270192 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P61294,Q0PD53,Q0PD54 | |UniProt=P61294,Q0PD53,Q0PD54 | ||
|association_with_transcript=-17bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | ||
|cluster_id=chr9:103014379..103014386,+ | |||
|description=CAGE_peak_8_at_Rab6b_5end | |description=CAGE_peak_8_at_Rab6b_5end | ||
|id=chr9:103014379..103014386,+ | |id=chr9:103014379..103014386,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.41e-13!23;CL:0000337!7.41e-13!23;CL:0000540!8.36e-09!33;CL:0000047!8.36e-09!33;CL:0000031!8.36e-09!33;CL:0000404!8.36e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.85e-24,23;CL:0000337,8.85e-24,23;CL:0000540,2.61e-15,33;CL:0000047,2.61e-15,33;CL:0000031,2.61e-15,33;CL:0000404,2.61e-15,33;CL:0000393,2.51e-12,39;CL:0000211,2.51e-12,39;CL:0002319,8.32e-11,43;CL:0000221,1.80e-10,44;CL:0000133,1.80e-10,44;CL:0002612,5.05e-08,3;CL:0002610,4.93e-07,3;CL:0002614,9.66e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.13e-24!71;UBERON:0003075!6.13e-24!71;UBERON:0007284!6.13e-24!71;UBERON:0001049!6.60e-20!52;UBERON:0005068!6.60e-20!52;UBERON:0006241!6.60e-20!52;UBERON:0007135!6.60e-20!52;UBERON:0004121!7.79e-20!102;UBERON:0000924!7.79e-20!102;UBERON:0006601!7.79e-20!102;UBERON:0000033!2.60e-19!63;UBERON:0000073!4.32e-19!75;UBERON:0001016!4.32e-19!75;UBERON:0001017!8.52e-19!73;UBERON:0005743!8.52e-19!73;UBERON:0000955!7.34e-18!50;UBERON:0006238!7.34e-18!50;UBERON:0002020!1.62e-17!34;UBERON:0002616!3.58e-17!49;UBERON:0003056!4.82e-17!49;UBERON:0003080!8.13e-14!40;UBERON:0007811!1.87e-13!86;UBERON:0002791!2.07e-13!29;UBERON:0003528!2.07e-13!29;UBERON:0001893!2.07e-13!29;UBERON:0002780!4.35e-13!39;UBERON:0001890!4.35e-13!39;UBERON:0006240!4.35e-13!39;UBERON:0000153!4.38e-11!94;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0000956!2.84e-08!21;UBERON:0001869!2.84e-08!21;UBERON:0000203!2.84e-08!21;UBERON:0002619!1.64e-07!17;UBERON:0003076!5.59e-07!12;UBERON:0003057!5.59e-07!12;UBERON:0002420!9.01e-07!8;UBERON:0007245!9.01e-07!8;UBERON:0010009!9.01e-07!8;UBERON:0010011!9.01e-07!8;UBERON:0000454!9.01e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-43,54;UBERON:0001017,3.27e-41,73;UBERON:0001049,4.66e-40,52;UBERON:0005068,4.66e-40,52;UBERON:0006241,4.66e-40,52;UBERON:0007135,4.66e-40,52;UBERON:0001016,6.77e-40,75;UBERON:0002020,5.22e-38,34;UBERON:0002346,4.01e-31,64;UBERON:0003075,4.01e-31,64;UBERON:0007284,4.01e-31,64;UBERON:0000955,5.71e-30,47;UBERON:0006238,5.71e-30,47;UBERON:0004121,8.97e-30,95;UBERON:0000924,8.97e-30,95;UBERON:0006601,8.97e-30,95;UBERON:0002616,2.39e-28,46;UBERON:0003528,1.63e-27,29;UBERON:0002791,1.63e-27,29;UBERON:0001893,1.63e-27,29;UBERON:0010371,2.39e-26,73;UBERON:0003080,1.52e-25,40;UBERON:0002780,8.65e-24,39;UBERON:0001890,8.65e-24,39;UBERON:0006240,8.65e-24,39;UBERON:0002021,3.71e-20,10;UBERON:0000411,3.71e-20,10;UBERON:0001950,3.71e-20,10;UBERON:0003056,8.97e-20,49;UBERON:0010314,2.49e-19,92;UBERON:0002619,7.92e-16,17;UBERON:0002420,2.03e-15,8;UBERON:0007245,2.03e-15,8;UBERON:0010009,2.03e-15,8;UBERON:0010011,2.03e-15,8;UBERON:0000454,2.03e-15,8;UBERON:0003076,5.22e-15,12;UBERON:0003057,5.22e-15,12;UBERON:0002240,8.91e-15,6;UBERON:0005174,8.91e-15,6;UBERON:0001137,8.91e-15,6;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0000025,3.97e-14,114;UBERON:0004111,1.06e-12,122;UBERON:0001948,1.46e-12,5;UBERON:0002315,1.46e-12,5;UBERON:0011216,2.73e-10,194;UBERON:0000369,2.93e-10,5;UBERON:0002435,2.93e-10,5;UBERON:0000204,2.93e-10,5;UBERON:0010082,2.93e-10,5;UBERON:0002950,8.19e-09,4;UBERON:0001891,8.19e-09,4;UBERON:0009616,8.19e-09,4;UBERON:0010286,8.19e-09,4;UBERON:0002257,5.05e-08,3;UBERON:0004684,4.93e-07,3;UBERON:0002275,4.93e-07,3;UBERON:0002038,9.66e-07,3;UBERON:0009663,9.66e-07,3;UBERON:0009661,9.66e-07,3;UBERON:0000125,9.66e-07,3;UBERON:0002308,9.66e-07,3 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,4.57041575046086,4.63823935998388,0.244981598429908,0.479227355091182,0,1.10115880999389,3.95830748064082,2.4577045320999,1.71452174049252,2.01272815925301,2.08365348222704,3.35019598801657,1.12552522006336,1.83357897332172,5.30331453852602,4.12877874317399,2.98239113320481,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0,0,0,0,0.878342391034642,2.72280718857492,0.255457055208591,0,0,0,3.59497534571574,4.11750542536764,1.00523481690292,2.78118912307642,4.34716277461562,3.32460871295296,3.40706652442291,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,0.562210347358373,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,2.10289948564127,1.44066457330998,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,3.37156238974363,3.04750385139728,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,2.24924921495265,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0,0,0.0603129249281559,0,0,0,4.26478194624172,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.292373642219257,0.288635524920988,0,0,0.443971906748129,0.179427713218951,0,0,0,0,0,0,2.25900737046827,3.68260189205742,6.30185064783336,3.26521046453006,1.37016503954128,1.5107877947794,2.02506750069542,2.70192721934532,1.35942722695261,3.62432218226274,0.415149390336707,1.19707462020309,0.341467211508268,0.729320151204882,0.628839487883947,0.735374033800057,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0,0.593175090620871,0.492522411877817,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p8@Rab6b | |short_description=p8@Rab6b | ||
}} | }} |
Latest revision as of 01:45, 26 September 2015
Short description: | p8@Rab6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rab6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -17bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end |
EntrezGene: | Rab6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.85e-24 | 23 |
neuroblast (sensu Vertebrata) | 8.85e-24 | 23 |
neuron | 2.61e-15 | 33 |
neuronal stem cell | 2.61e-15 | 33 |
neuroblast | 2.61e-15 | 33 |
electrically signaling cell | 2.61e-15 | 33 |
electrically responsive cell | 2.51e-12 | 39 |
electrically active cell | 2.51e-12 | 39 |
neural cell | 8.32e-11 | 43 |
ectodermal cell | 1.80e-10 | 44 |
neurectodermal cell | 1.80e-10 | 44 |
neuron of the ventral spinal cord | 5.05e-08 | 3 |
raphe nuclei neuron | 4.93e-07 | 3 |
neuron of the substantia nigra | 9.66e-07 | 3 |