FFCP PHASE1:Mm9::chr5:44493285..44493300,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19126|HGNC=|MCL_coexpression_id=16|UniProt=Q8R056|association_with_transcript=-14bp_to_ENSMUST00000171543,uc008xih.1_5end|description=CAGE_peak_2_at_Prom1_5end|id=chr5:44493285..44493300,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,3.83e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!6.96e-09!9;UBERON:0000019!6.96e-09!9;UBERON:0000047!6.96e-09!9;UBERON:0004088!6.96e-09!9;UBERON:0002104!6.96e-09!9;UBERON:0001456!6.96e-09!9;UBERON:0003072!6.96e-09!9;UBERON:0003071!6.96e-09!9;UBERON:0004128!6.96e-09!9;UBERON:0005409!4.18e-08!59;UBERON:0001444!6.07e-08!11;UBERON:0004175!4.36e-07!9;UBERON:0000020!5.46e-07!12;UBERON:0001032!5.46e-07!12;UBERON:0004456!5.46e-07!12;UBERON:0001008!7.27e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.67e-18,9;UBERON:0000019,7.67e-18,9;UBERON:0000047,7.67e-18,9;UBERON:0010312,7.67e-18,9;UBERON:0004088,7.67e-18,9;UBERON:0002104,7.67e-18,9;UBERON:0001456,7.67e-18,9;UBERON:0003072,7.67e-18,9;UBERON:0004128,7.67e-18,9;UBERON:0003071,7.67e-18,9;UBERON:0001444,1.66e-14,11;UBERON:0000020,2.97e-13,12;UBERON:0001032,2.97e-13,12;UBERON:0004456,2.97e-13,12;UBERON:0000033,3.41e-12,13;UBERON:0005085,3.41e-12,13;UBERON:0001155,2.42e-09,2;UBERON:0000059,2.42e-09,2;UBERON:0010147,2.67e-09,2;UBERON:0003937,2.67e-09,2;UBERON:0005399,2.67e-09,2;UBERON:0004175,1.17e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,3.46621943701529,2.99222361645286,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,9.31958806090611,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,4.80173241023982,87.7542539046596,0.390361328888111,0.459804208866946,0.360124259610698,4.67184935290717,8.02830689985669,20.7544226861457,29.2349380626354,288.712961744742,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0.864552199498777,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0.581857461502877,0.350679099451593,0.632365371242573,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,1.24815069245824,0.252578877947112,0.179397413521912,0,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0.162886959353576,1.64970122972535,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,3.74898276693435,0,0,0,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,0.826534557253359,2.09404753587224,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,1.31377732815827,4.57879060668163,0.428736758158132,2.00628841614145,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.952587382566147,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p2@Prom1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19126 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R056 | |||
|association_with_transcript=-14bp_to_ENSMUST00000171543,uc008xih.1_5end | |||
|cluster_id=chr5:44493285..44493300,- | |||
|description=CAGE_peak_2_at_Prom1_5end | |||
|id=chr5:44493285..44493300,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.83e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.96e-09!9;UBERON:0000019!6.96e-09!9;UBERON:0000047!6.96e-09!9;UBERON:0004088!6.96e-09!9;UBERON:0002104!6.96e-09!9;UBERON:0001456!6.96e-09!9;UBERON:0003072!6.96e-09!9;UBERON:0003071!6.96e-09!9;UBERON:0004128!6.96e-09!9;UBERON:0005409!4.18e-08!59;UBERON:0001444!6.07e-08!11;UBERON:0004175!4.36e-07!9;UBERON:0000020!5.46e-07!12;UBERON:0001032!5.46e-07!12;UBERON:0004456!5.46e-07!12;UBERON:0001008!7.27e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.67e-18,9;UBERON:0000019,7.67e-18,9;UBERON:0000047,7.67e-18,9;UBERON:0010312,7.67e-18,9;UBERON:0004088,7.67e-18,9;UBERON:0002104,7.67e-18,9;UBERON:0001456,7.67e-18,9;UBERON:0003072,7.67e-18,9;UBERON:0004128,7.67e-18,9;UBERON:0003071,7.67e-18,9;UBERON:0001444,1.66e-14,11;UBERON:0000020,2.97e-13,12;UBERON:0001032,2.97e-13,12;UBERON:0004456,2.97e-13,12;UBERON:0000033,3.41e-12,13;UBERON:0005085,3.41e-12,13;UBERON:0001155,2.42e-09,2;UBERON:0000059,2.42e-09,2;UBERON:0010147,2.67e-09,2;UBERON:0003937,2.67e-09,2;UBERON:0005399,2.67e-09,2;UBERON:0004175,1.17e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,3.46621943701529,2.99222361645286,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,9.31958806090611,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,4.80173241023982,87.7542539046596,0.390361328888111,0.459804208866946,0.360124259610698,4.67184935290717,8.02830689985669,20.7544226861457,29.2349380626354,288.712961744742,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0.864552199498777,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0.581857461502877,0.350679099451593,0.632365371242573,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,1.24815069245824,0.252578877947112,0.179397413521912,0,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0.162886959353576,1.64970122972535,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,3.74898276693435,0,0,0,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,0.826534557253359,2.09404753587224,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,1.31377732815827,4.57879060668163,0.428736758158132,2.00628841614145,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.952587382566147,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p2@Prom1 | |||
}} |
Latest revision as of 01:16, 26 September 2015
Short description: | p2@Prom1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prom1_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -14bp_to_ENSMUST00000171543, uc008xih.1_5end |
EntrezGene: | Prom1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.83e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 7.67e-18 | 9 |
camera-type eye | 7.67e-18 | 9 |
simple eye | 7.67e-18 | 9 |
immature eye | 7.67e-18 | 9 |
ocular region | 7.67e-18 | 9 |
visual system | 7.67e-18 | 9 |
face | 7.67e-18 | 9 |
optic cup | 7.67e-18 | 9 |
optic vesicle | 7.67e-18 | 9 |
eye primordium | 7.67e-18 | 9 |
subdivision of head | 1.66e-14 | 11 |
sense organ | 2.97e-13 | 12 |
sensory system | 2.97e-13 | 12 |
entire sense organ system | 2.97e-13 | 12 |
head | 3.41e-12 | 13 |
ectodermal placode | 3.41e-12 | 13 |
colon | 2.42e-09 | 2 |
large intestine | 2.42e-09 | 2 |
male accessory sex gland | 2.67e-09 | 2 |
sex gland | 2.67e-09 | 2 |
male reproductive gland | 2.67e-09 | 2 |
internal genitalia | 1.17e-07 | 9 |