Personal tools

FFCP PHASE1:Mm9::chr10:42481289..42481296,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=140740
|EntrezGene=140740
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8VHE0,Q8K2U5
|UniProt=Q8VHE0,Q8K2U5
|association_with_transcript=-5bp_to_ENSMUST00000019937,NM_153055,uc007eyx.2,uc007eyy.2,uc007eyz.2_5end
|association_with_transcript=-5bp_to_ENSMUST00000019937,NM_153055,uc007eyx.2,uc007eyy.2,uc007eyz.2_5end
|cluster_id=chr10:42481289..42481296,+
|description=CAGE_peak_5_at_Sec63_5end
|description=CAGE_peak_5_at_Sec63_5end
|id=chr10:42481289..42481296,+
|id=chr10:42481289..42481296,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,3.84e-08,25;CL:0000239,9.47e-08,6;CL:0000677,9.47e-08,6;CL:0000584,9.47e-08,6;CL:0000223,1.49e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003929!2.45e-10!55;UBERON:0000490!1.64e-09!66;UBERON:0005911!1.08e-08!69
|ontology_enrichment_uberon_v019_2=UBERON:0003929,2.12e-15,55;UBERON:0000490,4.49e-14,66;UBERON:0005911,1.37e-11,69;UBERON:0002530,1.05e-08,65;UBERON:0002368,1.28e-08,60;UBERON:0003408,2.13e-07,24;UBERON:0002365,4.69e-07,25;UBERON:0002330,4.69e-07,25;UBERON:0002370,6.47e-07,23;UBERON:0000974,6.47e-07,23;UBERON:0004807,6.47e-07,23;UBERON:0005058,6.47e-07,23;UBERON:0003351,6.47e-07,23;UBERON:0009113,6.47e-07,23;UBERON:0003295,6.47e-07,23;UBERON:0009722,6.47e-07,23;UBERON:0005562,6.47e-07,23;UBERON:0007690,6.47e-07,23
|phase1_expression=0.640595388419176,4.53668029931169,3.18499467572675,3.32710632437513,4.00716583957078,2.68606835059024,1.40167584357315,0.516493293766305,3.66050677594334,4.44722600011788,0.513653904676515,0.239316476986009,0.342401459862411,0.437102012094987,0.333109761815663,0.404950534779652,0,0,0.274228867211478,1.27316895539409,0.595303031057488,0.496454756004426,0.783599367416806,0.47997726838022,1.14704640533585,1.14846392823004,1.29228598847722,1.72376986148711,0,1.26015064879965,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,0.816677425049476,0,0,0.523523743973798,0.588231488031014,0,0,0.503587271902309,0.405507724878058,1.28482726513177,0,0.872100625521786,0.219686182734472,0.194429899074283,0.419959264876088,1.43752564364972,1.51004345451963,1.45072428402269,1.00828139742739,3.08711323243136,0.85960031981627,3.09403255366465,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,1.26194976810829,0.285650984403804,0.441737081903227,0.979926393719632,1.34183659425531,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0.294628585473668,0.569486723196412,0.559198337475902,1.28734528666413,1.20914496170857,1.15945795480671,2.58127163094416,1.3599426674155,3.2382191498269,3.24888208723835,1.79210754838934,1.12355536105401,1.87473354835864,1.55871602761721,0.70667914902068,0.704217098883403,3.84979432242953,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,1.1418387971906,0.776813650941515,0.148442139064825,0.173485326766136,0.608930956624282,2.30615497256059,0.753613202763113,0.470354828542819,0.125666591329675,0.988779870937496,0.86759614151947,0,0.647067399789637,1.10420759230197,0,0,0,0,0.766371165625774,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0.502617408451458,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0.81471491080253,0.497627882440372,0.252722758433675,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,0.30140963567143,0.95251098811859,0.768682321709099,0.937017245597288,0.517406741478031,0.862271971731369,1.70195472151037,1.40760899331159,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.995171334092466,0,0,0.568326998791185,1.03562886267751,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0.930135779001631,0,0.583826711835847,0.329119699826961,0.656669856316381,0.486412857275134,0,0.878200461164203,0.402619256281115,0.210289948564127,0.823236899034275,0.660837565967596,0.528901133327089,0.426576501070468,1.16118335930219,0.515469845288373,0.201683524623343,0.444756087689741,0.760902504450237,2.37264530772256,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,1.14248512609729,2.25415471346161,0.610953983535943,0.581857461502877,0.701358198903186,0.822074982615345,0.590440591918409,0.941992367048249,0.493588655687202,1.48226313543574,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,1.20588579876208,0.763877555344259,0.575392274901621,0.486405680325106,2.19649130550465,1.43768206527355,1.11642284300551,3.12037673114561,2.02063102357689,1.4351793081753,0.482443521363367,0.184753190166605,0.947457058852424,1.79261474086228,0,0.469380496577004,1.00503754465089,0.476087281772027,0.780534591431195,0.472905432318573,0.8858587585951,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,1.47529281905711,0.275936746304732,0.160550589987792,0.35163505977661,0.491804836130026,0.757412781613119,0,1.56175497718655,1.07711698866399,1.67278158566786,1.78238939265915,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,0.709700426041343,0.712262414669021,0.81443479676788,0.824850614862677,0,0.728341908464944,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.709360934569094,1.24858172321449,0.658196082408484,0.913394847343798,1.40803024838226,0.42366414172764,0,0.8244312647074,0.807322133479528,0.603129249281559,0.477489376012546,0.492422699235184,0.582961673259701,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0.565105371014073,0.546776910884101,0.457556346413045,0.849892149969277,0.559805809294632,0.552799895217695,0,1.58167996790568,1.42323626988794,0.86404272657441,0.418176592028937,0.655087691238533,0.944050424693745,0.330613822901344,0.785267825952089,0.259229946583586,1.24267862617385,0,2.54178128274764,1.15820943319968,0.777804753376191,0.774958940866387,0.844780627453891,0.938857909166032,1.0416350787516,1.36317147753424,1.20792060413003,0,0.632022241256357,1.21635129174099,0.821687657318618,1.42912905275575,1.25318686967237,1.98681354781265,1.20195449519969,1.32920574457119,1.31256384932592,1.600342939755,2.11734988787365,1.07203668813728,1.73181314952593,0.701261413089414,0,0.221985953374065,0.538283139656854,1.17519231454855,0.19318959403219,0.563047426353546,0.73260649706906,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,1.03787347584177,1.59609949360412,1.53660245178721,0.729320151204882,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,2.27427490587418,0.50695859978048,1.32038438970253,1.31098110457835,1.08842759088278,1.14870937911227,0.476293691283074,0.927074607558844,0.578727661391115,1.23625770240992,0.735994600671987,1.71434626192708,0.532427418478012,1.43061713968393,0.726732083161643,0.941093804153306,0.930760686808441,0.548783918618318,0.526139422875686,0.679020569229309,0,0.711810108745045,1.18205378850676,0,1.23949472948773,0.964533054905707,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.640595388419176,4.53668029931169,3.18499467572675,3.32710632437513,4.00716583957078,2.68606835059024,1.40167584357315,0.516493293766305,3.66050677594334,4.44722600011788,0.513653904676515,0.239316476986009,0.342401459862411,0.437102012094987,0.333109761815663,0.404950534779652,0,0,0.274228867211478,1.27316895539409,0.595303031057488,0.496454756004426,0.783599367416806,0.47997726838022,1.14704640533585,1.14846392823004,1.29228598847722,1.72376986148711,0,1.26015064879965,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,0.816677425049476,0,0,0.523523743973798,0.588231488031014,0,0,0.503587271902309,0.405507724878058,1.28482726513177,0,0.872100625521786,0.219686182734472,0.194429899074283,0.419959264876088,1.43752564364972,1.51004345451963,1.45072428402269,1.00828139742739,3.08711323243136,0.85960031981627,3.09403255366465,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,1.26194976810829,0.285650984403804,0.441737081903227,0.979926393719632,1.34183659425531,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0.294628585473668,0.569486723196412,0.559198337475902,1.28734528666413,1.20914496170857,1.15945795480671,2.58127163094416,1.3599426674155,3.2382191498269,3.24888208723835,1.79210754838934,1.12355536105401,1.87473354835864,1.55871602761721,0.70667914902068,0.704217098883403,3.84979432242953,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,1.1418387971906,0.776813650941515,0.148442139064825,0.173485326766136,0.608930956624282,2.30615497256059,0.753613202763113,0.470354828542819,0.125666591329675,0.988779870937496,0.86759614151947,0,0.647067399789637,1.10420759230197,0,0,0,0,0.766371165625774,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0.502617408451458,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0.81471491080253,0.497627882440372,0.252722758433675,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,0.30140963567143,0.95251098811859,0.768682321709099,0.937017245597288,0.517406741478031,0.862271971731369,1.70195472151037,1.40760899331159,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.995171334092466,0,0,0.568326998791185,1.03562886267751,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0.930135779001631,0,0.583826711835847,0.329119699826961,0.656669856316381,0.486412857275134,0,0.878200461164203,0.402619256281115,0.210289948564127,0.823236899034275,0.660837565967596,0.528901133327089,0.426576501070468,1.16118335930219,0.515469845288373,0.201683524623343,0.444756087689741,0.760902504450237,2.37264530772256,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,1.14248512609729,2.25415471346161,0.610953983535943,0.581857461502877,0.701358198903186,0.822074982615345,0.590440591918409,0.941992367048249,0.493588655687202,1.48226313543574,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,1.20588579876208,0.763877555344259,0.575392274901621,0.486405680325106,2.19649130550465,1.43768206527355,1.11642284300551,3.12037673114561,2.02063102357689,1.4351793081753,0.482443521363367,0.184753190166605,0.947457058852424,1.79261474086228,0,0.469380496577004,1.00503754465089,0.476087281772027,0.780534591431195,0.472905432318573,0.8858587585951,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,1.47529281905711,0.275936746304732,0.160550589987792,0.35163505977661,0.491804836130026,0.757412781613119,0,1.56175497718655,1.07711698866399,1.67278158566786,1.78238939265915,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,0.709700426041343,0.712262414669021,0.81443479676788,0.824850614862677,0,0.728341908464944,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.709360934569094,1.24858172321449,0.658196082408484,0.913394847343798,1.40803024838226,0.42366414172764,0,0.8244312647074,0.807322133479528,0.603129249281559,0.477489376012546,0.492422699235184,0.582961673259701,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0.565105371014073,0.546776910884101,0.457556346413045,0.849892149969277,0.559805809294632,0.552799895217695,0,1.58167996790568,1.42323626988794,0.86404272657441,0.418176592028937,0.655087691238533,0.944050424693745,0.330613822901344,0.785267825952089,0.259229946583586,1.24267862617385,0,2.54178128274764,1.15820943319968,0.777804753376191,0.774958940866387,0.844780627453891,0.938857909166032,1.0416350787516,1.36317147753424,1.20792060413003,0,0.632022241256357,1.21635129174099,0.821687657318618,1.42912905275575,1.25318686967237,1.98681354781265,1.20195449519969,1.32920574457119,1.31256384932592,1.600342939755,2.11734988787365,1.07203668813728,1.73181314952593,0.701261413089414,0,0.221985953374065,0.538283139656854,1.17519231454855,0.19318959403219,0.563047426353546,0.73260649706906,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,1.03787347584177,1.59609949360412,1.53660245178721,0.729320151204882,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,2.27427490587418,0.50695859978048,1.32038438970253,1.31098110457835,1.08842759088278,1.14870937911227,0.476293691283074,0.927074607558844,0.578727661391115,1.23625770240992,0.735994600671987,1.71434626192708,0.532427418478012,1.43061713968393,0.726732083161643,0.941093804153306,0.930760686808441,0.548783918618318,0.526139422875686,0.679020569229309,0,0.711810108745045,1.18205378850676,0,1.23949472948773,0.964533054905707,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p5@Sec63
|short_description=p5@Sec63
}}
}}

Latest revision as of 00:40, 26 September 2015

Short description:p5@Sec63
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sec63_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000019937, NM_153055, uc007eyx.2, uc007eyy.2, uc007eyz.2_5end
EntrezGene:Sec63
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sec63

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.84e-0825
brush border epithelial cell9.47e-086
gut absorptive cell9.47e-086
enterocyte9.47e-086
endodermal cell1.49e-0720

Uber anatomy
Ontology termp-valuen
gut epithelium2.12e-1555
unilaminar epithelium4.49e-1466
endo-epithelium1.37e-1169
gland1.05e-0865
endocrine gland1.28e-0860
gland of gut2.13e-0724
exocrine gland4.69e-0725
exocrine system4.69e-0725
thymus6.47e-0723
neck6.47e-0723
respiratory system epithelium6.47e-0723
hemolymphoid system gland6.47e-0723
pharyngeal epithelium6.47e-0723
thymic region6.47e-0723
pharyngeal gland6.47e-0723
entire pharyngeal arch endoderm6.47e-0723
thymus primordium6.47e-0723
early pharyngeal endoderm6.47e-0723
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:42481289..42481296,%2B&oldid=4223417"