FFCP PHASE1:Mm9::chr5:37442093..37442104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76071 | |EntrezGene=76071 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BVL9 | |UniProt=Q8BVL9 | ||
|association_with_transcript=0bp_to_ENSMUST00000043794,NM_178394,uc008xfi.2,uc008xfj.2_5end | |association_with_transcript=0bp_to_ENSMUST00000043794,NM_178394,uc008xfi.2,uc008xfj.2_5end | ||
|cluster_id=chr5:37442093..37442104,+ | |||
|description=CAGE_peak_9_at_Jakmip1_5end | |description=CAGE_peak_9_at_Jakmip1_5end | ||
|id=chr5:37442093..37442104,+ | |id=chr5:37442093..37442104,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.66e-10,12;CL:0000791,1.67e-09,9;CL:0000789,1.67e-09,9;CL:0002420,1.67e-09,9;CL:0002419,1.67e-09,9;CL:0000790,1.67e-09,9;CL:0002031,1.74e-09,25;CL:0000542,5.51e-09,13;CL:0000051,5.51e-09,13;CL:0000084,1.03e-07,11;CL:0000827,1.03e-07,11;CL:0000624,3.93e-07,8;CL:0000988,4.47e-07,32;CL:0002032,4.47e-07,32;CL:0000037,4.47e-07,32;CL:0000837,4.47e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.91e-10!24;UBERON:0002370!1.13e-09!23;UBERON:0000974!1.13e-09!23;UBERON:0004807!1.13e-09!23;UBERON:0005058!1.13e-09!23;UBERON:0003351!1.13e-09!23;UBERON:0009113!1.13e-09!23;UBERON:0003295!1.13e-09!23;UBERON:0009722!1.13e-09!23;UBERON:0005562!1.13e-09!23;UBERON:0007690!1.13e-09!23;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004119!4.83e-09!130;UBERON:0000925!4.83e-09!130;UBERON:0006595!4.83e-09!130;UBERON:0006562!5.35e-09!24;UBERON:0001557!5.35e-09!24;UBERON:0001042!5.35e-09!24;UBERON:0008814!5.35e-09!24;UBERON:0009145!5.35e-09!24;UBERON:0004177!5.45e-09!29;UBERON:0004921!7.82e-09!126;UBERON:0004185!7.82e-09!126;UBERON:0002193!1.60e-08!48;UBERON:0005409!5.15e-08!59;UBERON:0000072!2.65e-07!27;UBERON:0002390!3.25e-07!45;UBERON:0003061!3.25e-07!45;UBERON:0000160!4.47e-07!43 | |ontology_enrichment_uberon=UBERON:0003408!2.91e-10!24;UBERON:0002370!1.13e-09!23;UBERON:0000974!1.13e-09!23;UBERON:0004807!1.13e-09!23;UBERON:0005058!1.13e-09!23;UBERON:0003351!1.13e-09!23;UBERON:0009113!1.13e-09!23;UBERON:0003295!1.13e-09!23;UBERON:0009722!1.13e-09!23;UBERON:0005562!1.13e-09!23;UBERON:0007690!1.13e-09!23;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004119!4.83e-09!130;UBERON:0000925!4.83e-09!130;UBERON:0006595!4.83e-09!130;UBERON:0006562!5.35e-09!24;UBERON:0001557!5.35e-09!24;UBERON:0001042!5.35e-09!24;UBERON:0008814!5.35e-09!24;UBERON:0009145!5.35e-09!24;UBERON:0004177!5.45e-09!29;UBERON:0004921!7.82e-09!126;UBERON:0004185!7.82e-09!126;UBERON:0002193!1.60e-08!48;UBERON:0005409!5.15e-08!59;UBERON:0000072!2.65e-07!27;UBERON:0002390!3.25e-07!45;UBERON:0003061!3.25e-07!45;UBERON:0000160!4.47e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.41e-15,23;UBERON:0000974,2.41e-15,23;UBERON:0004807,2.41e-15,23;UBERON:0005058,2.41e-15,23;UBERON:0003351,2.41e-15,23;UBERON:0009113,2.41e-15,23;UBERON:0003295,2.41e-15,23;UBERON:0009722,2.41e-15,23;UBERON:0005562,2.41e-15,23;UBERON:0007690,2.41e-15,23;UBERON:0006562,1.28e-14,24;UBERON:0003408,1.28e-14,24;UBERON:0001557,1.28e-14,24;UBERON:0001042,1.28e-14,24;UBERON:0008814,1.28e-14,24;UBERON:0009145,1.28e-14,24;UBERON:0000072,9.18e-13,27;UBERON:0002193,1.90e-12,48;UBERON:0002405,1.90e-12,48;UBERON:0004177,9.68e-12,29;UBERON:0005057,9.68e-12,29;UBERON:0002390,1.43e-11,45;UBERON:0003061,1.43e-11,45;UBERON:0000077,2.25e-09,35;UBERON:0007811,4.67e-09,36;UBERON:0000065,1.05e-07,41;UBERON:0001004,1.79e-07,42;UBERON:0000153,2.98e-07,43;UBERON:0002368,9.01e-07,60 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0,1.67860320474049,0,0.468129052643987,0.34243593645101,0.0797721589953364,3.93761678841773,4.19617931611188,0,0.607425802169478,0.699561878128147,2.36596624018678,2.19383093769182,2.12194825899015,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,6.5282592781021,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0.599162557619291,0.915001205637253,0,0,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0.497627882440372,3.0326731012041,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.951128130562796,0.474529061544512,0.658795818896044,0.754005626400808,1.1937388322469,0.38992817423824,0,0.648414149624083,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0.321101179975584,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.989820737835213,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,4.42571487479924,0,0,0,0,0.178368817602071,0,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.370850604021019,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,0.559805809294632,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.649604114888975,0.895133478337407,1.19208812868759,0.841368146639782,1.18151621739662,1.00966449948148,2.209997392995,1.61321896218945,2.63136277997332,2.50150788264857,4.32444538071805,0,0,0,0,0.386379188064381,0.375364950902364,1.09890974560359,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0,1.67860320474049,0,0.468129052643987,0.34243593645101,0.0797721589953364,3.93761678841773,4.19617931611188,0,0.607425802169478,0.699561878128147,2.36596624018678,2.19383093769182,2.12194825899015,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,6.5282592781021,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0.599162557619291,0.915001205637253,0,0,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0.497627882440372,3.0326731012041,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.951128130562796,0.474529061544512,0.658795818896044,0.754005626400808,1.1937388322469,0.38992817423824,0,0.648414149624083,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0.321101179975584,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.989820737835213,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,4.42571487479924,0,0,0,0,0.178368817602071,0,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.370850604021019,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,0.559805809294632,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.649604114888975,0.895133478337407,1.19208812868759,0.841368146639782,1.18151621739662,1.00966449948148,2.209997392995,1.61321896218945,2.63136277997332,2.50150788264857,4.32444538071805,0,0,0,0,0.386379188064381,0.375364950902364,1.09890974560359,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p9@Jakmip1 | |short_description=p9@Jakmip1 | ||
}} | }} |
Latest revision as of 00:23, 26 September 2015
Short description: | p9@Jakmip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Jakmip1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000043794, NM_178394, uc008xfi.2, uc008xfj.2_5end |
EntrezGene: | Jakmip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.66e-10 | 12 |
mature alpha-beta T cell | 1.67e-09 | 9 |
alpha-beta T cell | 1.67e-09 | 9 |
immature T cell | 1.67e-09 | 9 |
mature T cell | 1.67e-09 | 9 |
immature alpha-beta T cell | 1.67e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 1.74e-09 | 25 |
lymphocyte | 5.51e-09 | 13 |
common lymphoid progenitor | 5.51e-09 | 13 |
T cell | 1.03e-07 | 11 |
pro-T cell | 1.03e-07 | 11 |
CD4-positive, alpha-beta T cell | 3.93e-07 | 8 |
hematopoietic cell | 4.47e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.47e-07 | 32 |
hematopoietic stem cell | 4.47e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.47e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.41e-15 | 23 |
neck | 2.41e-15 | 23 |
respiratory system epithelium | 2.41e-15 | 23 |
hemolymphoid system gland | 2.41e-15 | 23 |
pharyngeal epithelium | 2.41e-15 | 23 |
thymic region | 2.41e-15 | 23 |
pharyngeal gland | 2.41e-15 | 23 |
entire pharyngeal arch endoderm | 2.41e-15 | 23 |
thymus primordium | 2.41e-15 | 23 |
early pharyngeal endoderm | 2.41e-15 | 23 |
pharynx | 1.28e-14 | 24 |
gland of gut | 1.28e-14 | 24 |
upper respiratory tract | 1.28e-14 | 24 |
chordate pharynx | 1.28e-14 | 24 |
pharyngeal arch system | 1.28e-14 | 24 |
pharyngeal region of foregut | 1.28e-14 | 24 |
segment of respiratory tract | 9.18e-13 | 27 |
hemolymphoid system | 1.90e-12 | 48 |
immune system | 1.90e-12 | 48 |
hemopoietic organ | 9.68e-12 | 29 |
immune organ | 9.68e-12 | 29 |
hematopoietic system | 1.43e-11 | 45 |
blood island | 1.43e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 2.25e-09 | 35 |
craniocervical region | 4.67e-09 | 36 |
respiratory tract | 1.05e-07 | 41 |
respiratory system | 1.79e-07 | 42 |
anterior region of body | 2.98e-07 | 43 |
endocrine gland | 9.01e-07 | 60 |