FFCP PHASE1:Mm9::chr2:156246774..156246779,+: Difference between revisions
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{{FFCP|EntrezGene=13821|HGNC=|UniProt=A2AUK7|association_with_transcript=-4bp_to_ENSMUST00000109574_5end|description=CAGE_peak_13_at_Epb4.1l1_5end|id=chr2:156246774..156246779,+|ontology_enrichment_celltype=CL:0000117!9.76e-13!23;CL:0000337!9.76e-13!23|ontology_enrichment_celltype_v019_2=CL:0002612,3.91e-21,3;CL:0000117,2.64e-14,23;CL:0000337,2.64e-14,23;CL:0002613,1.58e-10,3;CL:0000540,8.10e-10,33;CL:0000047,8.10e-10,33;CL:0000031,8.10e-10,33;CL:0000404,8.10e-10,33;CL:0000393,3.19e-08,39;CL:0000211,3.19e-08,39;CL:0002319,2.10e-07,43;CL:0000221,3.19e-07,44;CL:0000133,3.19e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.73e-09!34;UBERON:0001049!1.84e-07!52;UBERON:0005068!1.84e-07!52;UBERON:0006241!1.84e-07!52;UBERON:0007135!1.84e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.99e-22,5;UBERON:0002315,2.99e-22,5;UBERON:0002257,3.91e-21,3;UBERON:0002020,3.53e-19,34;UBERON:0002240,1.32e-18,6;UBERON:0005174,1.32e-18,6;UBERON:0001137,1.32e-18,6;UBERON:0000369,2.61e-13,5;UBERON:0002435,2.61e-13,5;UBERON:0000204,2.61e-13,5;UBERON:0010082,2.61e-13,5;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0000073,1.01e-11,54;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0003076,1.90e-09,12;UBERON:0003057,1.90e-09,12;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0010371,2.14e-08,73;UBERON:0001017,2.14e-08,73;UBERON:0003528,3.17e-08,29;UBERON:0002791,3.17e-08,29;UBERON:0001893,3.17e-08,29;UBERON:0001016,3.84e-08,75;UBERON:0000489,4.45e-08,21|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,0,0.33575854382378,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0.299600110518405,0,0.829516898467821,0.675029691658453,0.841299845405528,1.42825492201902,0.883474163806454,0.857435594504678,1.34183659425531,0.919218786610021,0,0.638436690425939,0.307213066512487,0.527545150920775,3.11057988248193,2.6045668527838,0.837548997004143,0,0.763991238884051,1.47314292736834,1.42371680799103,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.11418387971906,0,0.445326417194474,0,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,1.38219787324151,0.347648640384553,0.255715457330331,0.41557608911912,0.811206315338788,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0,0.540186389416048,0,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.420579897128254,1.23485534855141,1.65209391491899,0,0,0,0.128867461322093,0,0.444756087689741,0,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.126473074248515,1.03327103585722,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0.234690248288502,0.837531287209079,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.436725127492355,0.809186078308924,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.335769232728157,0.579568782096571,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.682934423016537,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0,0.320125762024346,0.516919220600519,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0.231867835620421|short_description=p13@Epb4.1l1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13821 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AUK7 | |||
|association_with_transcript=-4bp_to_ENSMUST00000109574_5end | |||
|cluster_id=chr2:156246774..156246779,+ | |||
|description=CAGE_peak_13_at_Epb4.1l1_5end | |||
|id=chr2:156246774..156246779,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.76e-13!23;CL:0000337!9.76e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.91e-21,3;CL:0000117,2.64e-14,23;CL:0000337,2.64e-14,23;CL:0002613,1.58e-10,3;CL:0000540,8.10e-10,33;CL:0000047,8.10e-10,33;CL:0000031,8.10e-10,33;CL:0000404,8.10e-10,33;CL:0000393,3.19e-08,39;CL:0000211,3.19e-08,39;CL:0002319,2.10e-07,43;CL:0000221,3.19e-07,44;CL:0000133,3.19e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.73e-09!34;UBERON:0001049!1.84e-07!52;UBERON:0005068!1.84e-07!52;UBERON:0006241!1.84e-07!52;UBERON:0007135!1.84e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.99e-22,5;UBERON:0002315,2.99e-22,5;UBERON:0002257,3.91e-21,3;UBERON:0002020,3.53e-19,34;UBERON:0002240,1.32e-18,6;UBERON:0005174,1.32e-18,6;UBERON:0001137,1.32e-18,6;UBERON:0000369,2.61e-13,5;UBERON:0002435,2.61e-13,5;UBERON:0000204,2.61e-13,5;UBERON:0010082,2.61e-13,5;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0000073,1.01e-11,54;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0003076,1.90e-09,12;UBERON:0003057,1.90e-09,12;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0010371,2.14e-08,73;UBERON:0001017,2.14e-08,73;UBERON:0003528,3.17e-08,29;UBERON:0002791,3.17e-08,29;UBERON:0001893,3.17e-08,29;UBERON:0001016,3.84e-08,75;UBERON:0000489,4.45e-08,21 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,0,0.33575854382378,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0.299600110518405,0,0.829516898467821,0.675029691658453,0.841299845405528,1.42825492201902,0.883474163806454,0.857435594504678,1.34183659425531,0.919218786610021,0,0.638436690425939,0.307213066512487,0.527545150920775,3.11057988248193,2.6045668527838,0.837548997004143,0,0.763991238884051,1.47314292736834,1.42371680799103,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.11418387971906,0,0.445326417194474,0,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,1.38219787324151,0.347648640384553,0.255715457330331,0.41557608911912,0.811206315338788,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0,0.540186389416048,0,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.420579897128254,1.23485534855141,1.65209391491899,0,0,0,0.128867461322093,0,0.444756087689741,0,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.126473074248515,1.03327103585722,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0.234690248288502,0.837531287209079,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.436725127492355,0.809186078308924,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.335769232728157,0.579568782096571,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.682934423016537,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0,0.320125762024346,0.516919220600519,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Epb4.1l1 | |||
}} |
Latest revision as of 23:56, 25 September 2015
Short description: | p13@Epb4.1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Epb4.1l1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENSMUST00000109574_5end |
EntrezGene: | Epb4.1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.91e-21 | 3 |
CNS neuron (sensu Vertebrata) | 2.64e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-14 | 23 |
striatum neuron | 1.58e-10 | 3 |
neuron | 8.10e-10 | 33 |
neuronal stem cell | 8.10e-10 | 33 |
neuroblast | 8.10e-10 | 33 |
electrically signaling cell | 8.10e-10 | 33 |
electrically responsive cell | 3.19e-08 | 39 |
electrically active cell | 3.19e-08 | 39 |
neural cell | 2.10e-07 | 43 |
ectodermal cell | 3.19e-07 | 44 |
neurectodermal cell | 3.19e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.99e-22 | 5 |
gray matter of spinal cord | 2.99e-22 | 5 |
ventral horn of spinal cord | 3.91e-21 | 3 |
gray matter | 3.53e-19 | 34 |
spinal cord | 1.32e-18 | 6 |
dorsal region element | 1.32e-18 | 6 |
dorsum | 1.32e-18 | 6 |
corpus striatum | 2.61e-13 | 5 |
striatum | 2.61e-13 | 5 |
ventral part of telencephalon | 2.61e-13 | 5 |
future corpus striatum | 2.61e-13 | 5 |
neural tube | 3.28e-12 | 52 |
neural rod | 3.28e-12 | 52 |
future spinal cord | 3.28e-12 | 52 |
neural keel | 3.28e-12 | 52 |
regional part of nervous system | 1.01e-11 | 54 |
neurectoderm | 9.98e-10 | 64 |
neural plate | 9.98e-10 | 64 |
presumptive neural plate | 9.98e-10 | 64 |
posterior neural tube | 1.90e-09 | 12 |
chordal neural plate | 1.90e-09 | 12 |
basal ganglion | 1.59e-08 | 8 |
nuclear complex of neuraxis | 1.59e-08 | 8 |
aggregate regional part of brain | 1.59e-08 | 8 |
collection of basal ganglia | 1.59e-08 | 8 |
cerebral subcortex | 1.59e-08 | 8 |
ecto-epithelium | 2.14e-08 | 73 |
central nervous system | 2.14e-08 | 73 |
brain grey matter | 3.17e-08 | 29 |
regional part of telencephalon | 3.17e-08 | 29 |
telencephalon | 3.17e-08 | 29 |
nervous system | 3.84e-08 | 75 |
cavitated compound organ | 4.45e-08 | 21 |