FFCP PHASE1:Mm9::chr5:3543812..3543853,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=68152|HGNC=|UniProt=B2RVR0,Q9CVI2|association_with_transcript=0bp_to_ENSMUST00000115527,NM_001042501,uc008wgx.1,uc008wgy.1,uc012dro.1_5end|description=CAGE_peak_1_at_Fam133b_5end|id=chr5:3543812..3543853,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.24e-10!94;UBERON:0004177!2.73e-09!29;UBERON:0007811!9.45e-09!86;UBERON:0002370!1.80e-08!23;UBERON:0000974!1.80e-08!23;UBERON:0004807!1.80e-08!23;UBERON:0005058!1.80e-08!23;UBERON:0003351!1.80e-08!23;UBERON:0009113!1.80e-08!23;UBERON:0003295!1.80e-08!23;UBERON:0009722!1.80e-08!23;UBERON:0005562!1.80e-08!23;UBERON:0007690!1.80e-08!23;UBERON:0000065!2.73e-08!41;UBERON:0001004!7.71e-08!42;UBERON:0003408!8.40e-08!24;UBERON:0006562!9.97e-08!24;UBERON:0001557!9.97e-08!24;UBERON:0001042!9.97e-08!24;UBERON:0008814!9.97e-08!24;UBERON:0009145!9.97e-08!24;UBERON:0000072!8.89e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.64e-10,43;UBERON:0004177,2.73e-09,29;UBERON:0005057,2.73e-09,29;UBERON:0007811,7.23e-09,36;UBERON:0002370,1.80e-08,23;UBERON:0000974,1.80e-08,23;UBERON:0004807,1.80e-08,23;UBERON:0005058,1.80e-08,23;UBERON:0003351,1.80e-08,23;UBERON:0009113,1.80e-08,23;UBERON:0003295,1.80e-08,23;UBERON:0009722,1.80e-08,23;UBERON:0005562,1.80e-08,23;UBERON:0007690,1.80e-08,23;UBERON:0000065,2.73e-08,41;UBERON:0001004,7.71e-08,42;UBERON:0003408,8.40e-08,24;UBERON:0006562,9.97e-08,24;UBERON:0001557,9.97e-08,24;UBERON:0001042,9.97e-08,24;UBERON:0008814,9.97e-08,24;UBERON:0009145,9.97e-08,24;UBERON:0000072,8.89e-07,27|phase1_expression=23.5418805244047,8.72438519098403,6.3699893514535,25.1045295384669,19.5349334679075,10.0727563147134,12.8486952327539,23.5004448663669,46.037912143595,35.109678948299,42.8044920563762,35.4188385939294,34.7537481760348,26.2261207256992,22.9845735652807,33.0034685845416,41.2741508095607,27.918401634204,34.2786084014347,23.3414308488917,19.7300433150482,23.0355006786054,34.4783721663395,10.8794847499517,8.71755268055246,7.46501553349526,9.04600191934057,7.54149314400612,7.60093677825496,10.0812051903972,8.86922042621219,12.7006134691926,6.1506478758457,15.8481681015439,20.2196133825892,13.7974755647549,16.9460565697766,20.0895182753716,16.4080422349998,21.4644735029257,21.7645650571475,23.2235464885872,20.3914348273085,14.4781340671914,15.7134243390248,13.5824596599644,6.25913075478431,6.1047043786525,3.51497892375155,5.8328969722285,6.43937539476668,10.062679505548,43.7912601810692,27.5637613964311,32.2650047176765,11.5766746216176,12.0344044774278,13.4074743992135,10.9250888864183,14.8117474196169,11.4089652631112,3.04960078862219,5.33576877666684,4.49949858640699,0.988866362566974,6.3943210345149,3.89480143673926,7.68436610643109,22.2932666463227,16.4707244764663,19.3498964443271,14.2825492201902,13.9147180799517,17.3936934885235,20.7026217399391,22.9804696652505,11.0115880999389,25.9205296312931,26.5739302533301,11.2103344570665,14.5465353327831,20.8365348222704,17.3093459380856,14.069065250792,22.6141406709679,16.2045722010517,21.6404954814636,15.2847545576746,18.098560206631,17.5326019447742,26.087803983151,11.185510400758,6.79971333707751,10.2543606411185,12.3457519315057,9.40856462904405,16.1511083151515,14.4865774191349,10.9110121933205,12.0135455333516,21.8307300653855,24.3820307087204,61.153257529595,21.3320010945999,19.7006847320205,20.2687892380079,22.2430755806505,16.8992141984209,56.1895207514363,17.5161724096493,17.0015620230813,17.354532263792,14.0675453326196,17.3331036635516,25.7519268627194,14.9543243682314,12.6069433544531,23.5696951779456,22.9998743506967,23.6179600923217,21.6424688091186,31.0320162006542,22.3670113461747,52.4077626650669,52.1522299965503,10.2182822083437,30.073596250986,26.3957201637099,27.447169047782,25.4644086988199,32.4825428001225,25.5078334789115,33.0266208365325,35.2887331115856,29.7136903720171,30.3391161936707,28.3113431503879,23.8861383571379,22.2396027421634,19.7815344533286,33.831315170303,21.8406999211799,31.1507484563254,30.8944876563216,38.0324030255923,42.0213002534307,33.7326208415024,25.3529303324235,23.4969112296798,30.4460789070189,28.8559843628876,26.9610750885917,30.3071501655902,27.163668988729,26.1343313238088,25.8744546864041,21.066395619397,25.9921386185862,24.1538974486254,20.5054514810147,21.8109235782419,19.0865785148676,24.6214525008619,24.5955289684255,24.065669610431,29.066743093801,23.3397859217669,27.7901514833863,23.8611782374547,25.6101243963389,17.1055188141756,17.2515985161892,16.4662586468288,17.4468344388483,35.3287113587734,34.5759497594396,18.1730330641089,12.164726066523,30.9267963276089,28.1006372951131,26.0312271870629,17.3447831176075,15.1217069814512,17.690983228468,18.0321043386914,13.9994111515409,16.0854533632172,16.5133871794155,16.7669114922443,13.4822911298133,16.8587678902262,17.7235733196387,16.1217715810119,28.9048736902614,36.0664754153857,31.769607143869,29.4807780494791,30.0181309130563,26.1166898323183,19.3369293853279,21.351826986427,17.8925887686611,11.2651998293117,23.8588501174014,15.528160613943,17.9889689907883,21.7060329885698,16.8824011826692,15.786802810448,22.727994858614,22.86106697528,18.9447375099776,24.4405951096503,21.2120340171047,16.5379966750717,16.6702059445094,12.0196267059681,9.16642690590398,20.1380977281599,21.7915123536057,27.8670109715864,36.1557032701151,29.5709712843513,27.8060387353414,23.5663204477154,20.8793003207845,32.6304748299815,33.6626328266138,31.412589425525,23.9240439484977,25.2120073524208,24.87963807602,22.6186925908908,21.2123216689297,14.2611639175521,14.6246475541508,22.3165320083031,27.1931112893911,12.2951209032507,24.2372090116198,21.1390507008892,14.8366722832723,16.1567548299599,18.6395662402991,20.943075363745,16.9845918473299,14.5731852602962,15.7818163272108,15.0209355619679,46.591590881162,19.7296718439493,15.8478387263857,22.6412873501471,22.4359367242648,18.5843193675948,19.4224508923985,15.4185014052023,17.5402724172985,10.335566250827,17.2163682848599,16.7978390559344,21.0849563096953,22.4593348382374,23.7027568451862,13.7044191147498,17.5330423521918,30.6395645178409,27.1892251987278,12.5477923269272,20.5763553630329,23.9409315417069,23.5446839234733,20.8977256164694,13.700922710157,10.7948985709307,16.522901527378,14.5548742716275,46.3330370765559,32.9387430459647,29.0708298153711,20.7707878565457,21.0100351673678,16.6144076879015,27.8137953015765,25.4597612388801,21.6706211361384,26.1124283591293,33.9063222608444,36.4973588015137,26.0807117455436,47.4239819682856,52.0619402644008,47.6789909625262,14.3200592702267,27.3630634447682,23.9916971209681,24.5172123665489,26.5542135938375,23.1464317570948,25.2196327739615,22.4817399572914,12.3025292732494,19.1830160471853,16.776161453347,36.6400410144724,26.0158790116523,25.6460660208501,24.1119473546619,30.0942388703113,26.3571555765614,30.982311002479,27.4731252020735,25.5856800398734,28.5069262574687,38.0199608260382,30.3370675803051,17.8398189455344,23.5208091907454,28.4526602321371,30.0764848721369,27.4180269598146,28.0055397381527,38.1038980110409,40.9923786789479,37.1889216476399,33.3734672802942,37.9111156077637,38.8695840226931,47.3351453835354,15.8711268530648,15.5390167361845,19.8267623106941,17.6278847182282,19.8985281853156,15.5776454624481,16.6667978083211,16.9351019472462,13.5424468089548,33.3203587144069,34.0640675015311,33.8008352929244,33.3395173746754,30.1436308699083,40.0358765616541,33.7511250115903,32.8734478353681,28.0948293570207,35.7254615108756,30.6172675373321,33.5180893656866,21.683167930775,25.7693120092392,19.0747977991464,16.7297592689513,21.5579325967567,26.3724873265785,22.1434254618353,20.9738685763952,25.347929989024,24.1441716974178,32.1190370621697,27.0826394672597,26.8223640022714,26.1961530205691,26.7692792932616,23.9207433374994,26.7855835522149,27.5261980651323,36.6870100052395,26.4438951177413,30.7582685032044,25.1449300773928,25.8800796142159,25.8074554069613,23.0489245819693,29.2007379696006,33.407812006082,17.9565526930476,21.9474783529722,22.6560309463796,24.5538625901814,26.6491366839861,21.2197272079256,12.2407183189594,17.778802241851,17.8342974860088,22.9545998482612,16.9855392722027,22.4911800551809|short_description=p1@Fam133b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68152 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=B2RVR0,Q9CVI2 | |||
|association_with_transcript=0bp_to_ENSMUST00000115527,NM_001042501,uc008wgx.1,uc008wgy.1,uc012dro.1_5end | |||
|cluster_id=chr5:3543812..3543853,+ | |||
|description=CAGE_peak_1_at_Fam133b_5end | |||
|id=chr5:3543812..3543853,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.24e-10!94;UBERON:0004177!2.73e-09!29;UBERON:0007811!9.45e-09!86;UBERON:0002370!1.80e-08!23;UBERON:0000974!1.80e-08!23;UBERON:0004807!1.80e-08!23;UBERON:0005058!1.80e-08!23;UBERON:0003351!1.80e-08!23;UBERON:0009113!1.80e-08!23;UBERON:0003295!1.80e-08!23;UBERON:0009722!1.80e-08!23;UBERON:0005562!1.80e-08!23;UBERON:0007690!1.80e-08!23;UBERON:0000065!2.73e-08!41;UBERON:0001004!7.71e-08!42;UBERON:0003408!8.40e-08!24;UBERON:0006562!9.97e-08!24;UBERON:0001557!9.97e-08!24;UBERON:0001042!9.97e-08!24;UBERON:0008814!9.97e-08!24;UBERON:0009145!9.97e-08!24;UBERON:0000072!8.89e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.64e-10,43;UBERON:0004177,2.73e-09,29;UBERON:0005057,2.73e-09,29;UBERON:0007811,7.23e-09,36;UBERON:0002370,1.80e-08,23;UBERON:0000974,1.80e-08,23;UBERON:0004807,1.80e-08,23;UBERON:0005058,1.80e-08,23;UBERON:0003351,1.80e-08,23;UBERON:0009113,1.80e-08,23;UBERON:0003295,1.80e-08,23;UBERON:0009722,1.80e-08,23;UBERON:0005562,1.80e-08,23;UBERON:0007690,1.80e-08,23;UBERON:0000065,2.73e-08,41;UBERON:0001004,7.71e-08,42;UBERON:0003408,8.40e-08,24;UBERON:0006562,9.97e-08,24;UBERON:0001557,9.97e-08,24;UBERON:0001042,9.97e-08,24;UBERON:0008814,9.97e-08,24;UBERON:0009145,9.97e-08,24;UBERON:0000072,8.89e-07,27 | |||
|phase1_expression=23.5418805244047,8.72438519098403,6.3699893514535,25.1045295384669,19.5349334679075,10.0727563147134,12.8486952327539,23.5004448663669,46.037912143595,35.109678948299,42.8044920563762,35.4188385939294,34.7537481760348,26.2261207256992,22.9845735652807,33.0034685845416,41.2741508095607,27.918401634204,34.2786084014347,23.3414308488917,19.7300433150482,23.0355006786054,34.4783721663395,10.8794847499517,8.71755268055246,7.46501553349526,9.04600191934057,7.54149314400612,7.60093677825496,10.0812051903972,8.86922042621219,12.7006134691926,6.1506478758457,15.8481681015439,20.2196133825892,13.7974755647549,16.9460565697766,20.0895182753716,16.4080422349998,21.4644735029257,21.7645650571475,23.2235464885872,20.3914348273085,14.4781340671914,15.7134243390248,13.5824596599644,6.25913075478431,6.1047043786525,3.51497892375155,5.8328969722285,6.43937539476668,10.062679505548,43.7912601810692,27.5637613964311,32.2650047176765,11.5766746216176,12.0344044774278,13.4074743992135,10.9250888864183,14.8117474196169,11.4089652631112,3.04960078862219,5.33576877666684,4.49949858640699,0.988866362566974,6.3943210345149,3.89480143673926,7.68436610643109,22.2932666463227,16.4707244764663,19.3498964443271,14.2825492201902,13.9147180799517,17.3936934885235,20.7026217399391,22.9804696652505,11.0115880999389,25.9205296312931,26.5739302533301,11.2103344570665,14.5465353327831,20.8365348222704,17.3093459380856,14.069065250792,22.6141406709679,16.2045722010517,21.6404954814636,15.2847545576746,18.098560206631,17.5326019447742,26.087803983151,11.185510400758,6.79971333707751,10.2543606411185,12.3457519315057,9.40856462904405,16.1511083151515,14.4865774191349,10.9110121933205,12.0135455333516,21.8307300653855,24.3820307087204,61.153257529595,21.3320010945999,19.7006847320205,20.2687892380079,22.2430755806505,16.8992141984209,56.1895207514363,17.5161724096493,17.0015620230813,17.354532263792,14.0675453326196,17.3331036635516,25.7519268627194,14.9543243682314,12.6069433544531,23.5696951779456,22.9998743506967,23.6179600923217,21.6424688091186,31.0320162006542,22.3670113461747,52.4077626650669,52.1522299965503,10.2182822083437,30.073596250986,26.3957201637099,27.447169047782,25.4644086988199,32.4825428001225,25.5078334789115,33.0266208365325,35.2887331115856,29.7136903720171,30.3391161936707,28.3113431503879,23.8861383571379,22.2396027421634,19.7815344533286,33.831315170303,21.8406999211799,31.1507484563254,30.8944876563216,38.0324030255923,42.0213002534307,33.7326208415024,25.3529303324235,23.4969112296798,30.4460789070189,28.8559843628876,26.9610750885917,30.3071501655902,27.163668988729,26.1343313238088,25.8744546864041,21.066395619397,25.9921386185862,24.1538974486254,20.5054514810147,21.8109235782419,19.0865785148676,24.6214525008619,24.5955289684255,24.065669610431,29.066743093801,23.3397859217669,27.7901514833863,23.8611782374547,25.6101243963389,17.1055188141756,17.2515985161892,16.4662586468288,17.4468344388483,35.3287113587734,34.5759497594396,18.1730330641089,12.164726066523,30.9267963276089,28.1006372951131,26.0312271870629,17.3447831176075,15.1217069814512,17.690983228468,18.0321043386914,13.9994111515409,16.0854533632172,16.5133871794155,16.7669114922443,13.4822911298133,16.8587678902262,17.7235733196387,16.1217715810119,28.9048736902614,36.0664754153857,31.769607143869,29.4807780494791,30.0181309130563,26.1166898323183,19.3369293853279,21.351826986427,17.8925887686611,11.2651998293117,23.8588501174014,15.528160613943,17.9889689907883,21.7060329885698,16.8824011826692,15.786802810448,22.727994858614,22.86106697528,18.9447375099776,24.4405951096503,21.2120340171047,16.5379966750717,16.6702059445094,12.0196267059681,9.16642690590398,20.1380977281599,21.7915123536057,27.8670109715864,36.1557032701151,29.5709712843513,27.8060387353414,23.5663204477154,20.8793003207845,32.6304748299815,33.6626328266138,31.412589425525,23.9240439484977,25.2120073524208,24.87963807602,22.6186925908908,21.2123216689297,14.2611639175521,14.6246475541508,22.3165320083031,27.1931112893911,12.2951209032507,24.2372090116198,21.1390507008892,14.8366722832723,16.1567548299599,18.6395662402991,20.943075363745,16.9845918473299,14.5731852602962,15.7818163272108,15.0209355619679,46.591590881162,19.7296718439493,15.8478387263857,22.6412873501471,22.4359367242648,18.5843193675948,19.4224508923985,15.4185014052023,17.5402724172985,10.335566250827,17.2163682848599,16.7978390559344,21.0849563096953,22.4593348382374,23.7027568451862,13.7044191147498,17.5330423521918,30.6395645178409,27.1892251987278,12.5477923269272,20.5763553630329,23.9409315417069,23.5446839234733,20.8977256164694,13.700922710157,10.7948985709307,16.522901527378,14.5548742716275,46.3330370765559,32.9387430459647,29.0708298153711,20.7707878565457,21.0100351673678,16.6144076879015,27.8137953015765,25.4597612388801,21.6706211361384,26.1124283591293,33.9063222608444,36.4973588015137,26.0807117455436,47.4239819682856,52.0619402644008,47.6789909625262,14.3200592702267,27.3630634447682,23.9916971209681,24.5172123665489,26.5542135938375,23.1464317570948,25.2196327739615,22.4817399572914,12.3025292732494,19.1830160471853,16.776161453347,36.6400410144724,26.0158790116523,25.6460660208501,24.1119473546619,30.0942388703113,26.3571555765614,30.982311002479,27.4731252020735,25.5856800398734,28.5069262574687,38.0199608260382,30.3370675803051,17.8398189455344,23.5208091907454,28.4526602321371,30.0764848721369,27.4180269598146,28.0055397381527,38.1038980110409,40.9923786789479,37.1889216476399,33.3734672802942,37.9111156077637,38.8695840226931,47.3351453835354,15.8711268530648,15.5390167361845,19.8267623106941,17.6278847182282,19.8985281853156,15.5776454624481,16.6667978083211,16.9351019472462,13.5424468089548,33.3203587144069,34.0640675015311,33.8008352929244,33.3395173746754,30.1436308699083,40.0358765616541,33.7511250115903,32.8734478353681,28.0948293570207,35.7254615108756,30.6172675373321,33.5180893656866,21.683167930775,25.7693120092392,19.0747977991464,16.7297592689513,21.5579325967567,26.3724873265785,22.1434254618353,20.9738685763952,25.347929989024,24.1441716974178,32.1190370621697,27.0826394672597,26.8223640022714,26.1961530205691,26.7692792932616,23.9207433374994,26.7855835522149,27.5261980651323,36.6870100052395,26.4438951177413,30.7582685032044,25.1449300773928,25.8800796142159,25.8074554069613,23.0489245819693,29.2007379696006,33.407812006082,17.9565526930476,21.9474783529722,22.6560309463796,24.5538625901814,26.6491366839861,21.2197272079256,12.2407183189594,17.778802241851,17.8342974860088,22.9545998482612,16.9855392722027,22.4911800551809 | |||
|short_description=p1@Fam133b | |||
}} |
Latest revision as of 23:47, 25 September 2015
Short description: | p1@Fam133b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam133b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115527, NM_001042501, uc008wgx.1, uc008wgy.1, uc012dro.1_5end |
EntrezGene: | Fam133b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 3.64e-10 | 43 |
hemopoietic organ | 2.73e-09 | 29 |
immune organ | 2.73e-09 | 29 |
craniocervical region | 7.23e-09 | 36 |
thymus | 1.80e-08 | 23 |
neck | 1.80e-08 | 23 |
respiratory system epithelium | 1.80e-08 | 23 |
hemolymphoid system gland | 1.80e-08 | 23 |
pharyngeal epithelium | 1.80e-08 | 23 |
thymic region | 1.80e-08 | 23 |
pharyngeal gland | 1.80e-08 | 23 |
entire pharyngeal arch endoderm | 1.80e-08 | 23 |
thymus primordium | 1.80e-08 | 23 |
early pharyngeal endoderm | 1.80e-08 | 23 |
respiratory tract | 2.73e-08 | 41 |
respiratory system | 7.71e-08 | 42 |
gland of gut | 8.40e-08 | 24 |
pharynx | 9.97e-08 | 24 |
upper respiratory tract | 9.97e-08 | 24 |
chordate pharynx | 9.97e-08 | 24 |
pharyngeal arch system | 9.97e-08 | 24 |
pharyngeal region of foregut | 9.97e-08 | 24 |
segment of respiratory tract | 8.89e-07 | 27 |