FFCP PHASE1:Mm9::chr10:38853856..38853872,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:38853856..38853872,+ to FFCP PHASE1:Mm9::chr10:38853856..38853872,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71924 | |EntrezGene=71924 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D6T1 | |UniProt=Q9D6T1 | ||
|association_with_transcript=27bp_to_ENSMUST00000019991,NM_028006,uc007evt.1,uc007evu.1,uc007evv.1_5end | |||
|cluster_id=chr10:38853856..38853872,+ | |||
|description=CAGE_peak_3_at_Tube1_5end | |||
|id=chr10:38853856..38853872,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.86e-12,43;UBERON:0002370,4.31e-12,23;UBERON:0000974,4.31e-12,23;UBERON:0004807,4.31e-12,23;UBERON:0005058,4.31e-12,23;UBERON:0003351,4.31e-12,23;UBERON:0009113,4.31e-12,23;UBERON:0003295,4.31e-12,23;UBERON:0009722,4.31e-12,23;UBERON:0005562,4.31e-12,23;UBERON:0007690,4.31e-12,23;UBERON:0006562,2.16e-11,24;UBERON:0003408,2.16e-11,24;UBERON:0001557,2.16e-11,24;UBERON:0001042,2.16e-11,24;UBERON:0008814,2.16e-11,24;UBERON:0009145,2.16e-11,24;UBERON:0004177,4.18e-11,29;UBERON:0005057,4.18e-11,29;UBERON:0007811,1.26e-10,36;UBERON:0000065,8.29e-10,41;UBERON:0000072,1.29e-09,27;UBERON:0001004,1.97e-09,42;UBERON:0000077,2.46e-08,35 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.174840804837995,0.333109761815663,0.809901069559304,1.39912375625629,0,0.274228867211478,0,0.255129870453209,0.992909512008853,0.783599367416806,0.159992422793407,0,0,0,0,0.190023419456374,0,0.665191531965914,1.27006134691926,1.84519436275371,0,0.866554859253824,0.332469290716985,0.204169356262369,0.837063261473815,0,0,1.17646297606203,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0.782391344348039,0,0,0,0.839918529752175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.829516898467821,0.540023753326763,0.630974884054146,0.571301968807607,0.220868540951614,0.734944795289724,0.958454710182364,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0.284743361598206,0.186399445825301,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0.280888840263504,0.852151612890289,0.779358013808606,1.06001872353102,0.422530259330042,1.28326477414318,0,7.11066703153331,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.705532242814229,0.251333182659351,0,0,0.884610551949874,1.13236794963186,0.441683036920787,0,0,0,0,0.255457055208591,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0,0,0,1.62942982160506,0.497627882440372,0,0,1.56144531555244,0.919608417733892,2.16074555766419,0.753524089178575,1.56483948048054,1.2811372028485,0.937017245597288,0.517406741478031,1.29340795759705,2.26927296201383,1.40760899331159,1.09597866213787,0.834141747676794,0.696504333044333,0.823128545631774,0.398068533636986,0.702213187313235,0.51469581422943,0.568326998791185,1.24275463521301,1.17263029990548,0.180062061461015,0.710234206755631,0.787056926989615,1.07986979021165,1.39520366850245,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0.402619256281115,0,0.514523061896422,0,0.264450566663544,1.70630600428187,0.464473343720877,0.902072229254653,1.00841762311671,1.11189021922435,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.199141273254367,1.13800740571849,1.14248512609729,1.1270773567308,0.610953983535943,1.16371492300575,0.420814919341911,0.569128834118316,0.147610147979602,0.31399745568275,0,0,0.667380422864376,0.393117990226406,0.674586337154561,0.405720242777006,0.482354319504834,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0,0.252578877947112,0.179397413521912,0,0,2.08440552947533,2.28150967018836,2.37643120085263,1.87752198630802,1.00503754465089,0.476087281772027,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0.491804836130026,0.252470927204373,0.315508219416257,0,0.861693590931196,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.292255857911312,1.18586333383957,0,0,0.712262414669021,0.81443479676788,0.164970122972535,0,1.69946445308487,0.604647113929502,0.754420319023592,0.885905678642318,0,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,0,0.540183282093931,0.905510786479282,1.07168517515796,1.06404140185364,0.178368817602071,0.658196082408484,0.304464949114599,0.704015124191131,0,0.220528398054962,0.32977250588296,0.484393280087717,0.663442174209714,0.954978752025092,0.164140899745061,0,0,0.854354403989263,1.03193433981611,1.48155621895769,0.188368457004691,0.956859594047176,0.686334519619568,0,0.419854356970974,0.552799895217695,0,1.26534397432454,2.23651413839534,1.08005340821801,1.67270636811575,1.09181281873089,0.674321731924103,0.41326727862668,0,0,0.621339313086926,0.56369293868419,0.897099276263873,1.15820943319968,0.777804753376191,1.03327858782185,1.35164900392623,0.821500670520278,1.5624526181274,0.419437377702843,0,0.576060012515731,9.16432249821717,0.810900861160657,1.54066435747241,1.16928740680016,5.37080087002444,5.96044064343795,6.61074972359829,6.35064966850682,7.57248374611107,9.22102360525498,8.06609481094724,5.45764132142614,5.77271049841977,8.53201385925453,0,0.887943813496259,0.448569283047378,0.335769232728157,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.798049746802062,1.02440163452481,1.70174701947806,1.46729213839588,0.551530525350042,0,1.44224540067226,0.962757628775446,1.26348605881899,0.760437899670719,0.943131706930381,0.468207537349412,1.34452820050225,0.804096565378586,0.952587382566147,0.231768651889711,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.354951612318675,0.953744759789284,0.726732083161643,0.752875043322645,0.676916863133412,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.30498519936592,0.788035859004508,0.818462086339379,0.929621047115796,0.578719832943424,0,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843 | 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| ||
|short_description=p3@Tube1 | |||
}} | }} |
Latest revision as of 23:43, 25 September 2015
Short description: | p3@Tube1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tube1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 27bp_to_ENSMUST00000019991, NM_028006, uc007evt.1, uc007evu.1, uc007evv.1_5end |
EntrezGene: | Tube1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.86e-12 | 43 |
thymus | 4.31e-12 | 23 |
neck | 4.31e-12 | 23 |
respiratory system epithelium | 4.31e-12 | 23 |
hemolymphoid system gland | 4.31e-12 | 23 |
pharyngeal epithelium | 4.31e-12 | 23 |
thymic region | 4.31e-12 | 23 |
pharyngeal gland | 4.31e-12 | 23 |
entire pharyngeal arch endoderm | 4.31e-12 | 23 |
thymus primordium | 4.31e-12 | 23 |
early pharyngeal endoderm | 4.31e-12 | 23 |
pharynx | 2.16e-11 | 24 |
gland of gut | 2.16e-11 | 24 |
upper respiratory tract | 2.16e-11 | 24 |
chordate pharynx | 2.16e-11 | 24 |
pharyngeal arch system | 2.16e-11 | 24 |
pharyngeal region of foregut | 2.16e-11 | 24 |
hemopoietic organ | 4.18e-11 | 29 |
immune organ | 4.18e-11 | 29 |
craniocervical region | 1.26e-10 | 36 |
respiratory tract | 8.29e-10 | 41 |
segment of respiratory tract | 1.29e-09 | 27 |
respiratory system | 1.97e-09 | 42 |
mixed endoderm/mesoderm-derived structure | 2.46e-08 | 35 |