FFCP PHASE1:Mm9::chr16:96583412..96583423,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:96583412..96583423,+ to FFCP PHASE1:Mm9::chr16:96583412..96583423,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72058 | |EntrezGene=72058 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TSN7,D3YXH0 | |UniProt=Q7TSN7,D3YXH0 | ||
|association_with_transcript=11bp_to_ENSMUST00000000163,ENSMUST00000081093,ENSMUST00000113795_5end | |||
|cluster_id=chr16:96583412..96583423,+ | |||
|description=CAGE_peak_2_at_Igsf5_5end | |||
|id=chr16:96583412..96583423,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.07e-07!25;CL:0002563!5.96e-07!9;CL:0002251!5.96e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.45e-09,9;CL:0002251,1.45e-09,9;CL:0000066,1.53e-09,25;CL:0000239,4.02e-08,6;CL:0000677,4.02e-08,6;CL:0000584,4.02e-08,6;CL:0000223,5.94e-08,20;CL:0002076,5.97e-07,15;CL:0000075,8.91e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.64e-26!128;UBERON:0001555!5.64e-26!128;UBERON:0007026!5.64e-26!128;UBERON:0004119!4.87e-25!130;UBERON:0000925!4.87e-25!130;UBERON:0006595!4.87e-25!130;UBERON:0004921!1.61e-24!126;UBERON:0004185!1.61e-24!126;UBERON:0000160!1.02e-23!43;UBERON:0005409!2.78e-21!59;UBERON:0005177!6.87e-14!85;UBERON:0000344!1.21e-11!15;UBERON:0009569!1.42e-11!66;UBERON:0000466!1.45e-11!79;UBERON:0002100!1.12e-10!98;UBERON:0001242!2.74e-10!13;UBERON:0000060!2.74e-10!13;UBERON:0001262!2.74e-10!13;UBERON:0004786!2.74e-10!13;UBERON:0002108!1.72e-08!16;UBERON:0000481!1.76e-08!230;UBERON:0003104!6.44e-08!131;UBERON:0009142!6.44e-08!131;UBERON:0000077!7.83e-08!97;UBERON:0005172!7.99e-08!49;UBERON:0005173!7.99e-08!49;UBERON:0002417!7.99e-08!49;UBERON:0000916!7.99e-08!49;UBERON:0006554!9.31e-08!16;UBERON:0001008!9.61e-08!17;UBERON:0002365!1.63e-07!25;UBERON:0002330!1.63e-07!25;UBERON:0002107!1.84e-07!22;UBERON:0007499!1.84e-07!22;UBERON:0006925!1.84e-07!22;UBERON:0009497!1.84e-07!22;UBERON:0000015!1.84e-07!22;UBERON:0002423!1.84e-07!22;UBERON:0006235!1.84e-07!22;UBERON:0008835!1.84e-07!22;UBERON:0003894!1.84e-07!22;UBERON:0004161!1.84e-07!22;UBERON:0008836!1.84e-07!22;UBERON:0001041!2.07e-07!92;UBERON:0003350!5.96e-07!9;UBERON:0004808!5.96e-07!9;UBERON:0001277!5.96e-07!9;UBERON:0009854!7.36e-07!23;UBERON:0009856!7.36e-07!23;UBERON:0005911!8.86e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.43e-24,31;UBERON:0001007,2.46e-19,116;UBERON:0001555,2.46e-19,116;UBERON:0007026,2.46e-19,116;UBERON:0005409,8.73e-19,47;UBERON:0004119,1.01e-18,118;UBERON:0000925,1.01e-18,118;UBERON:0006595,1.01e-18,118;UBERON:0004921,9.43e-18,114;UBERON:0000344,1.64e-16,15;UBERON:0001242,1.68e-14,13;UBERON:0001262,1.68e-14,13;UBERON:0004786,1.68e-14,13;UBERON:0004923,8.77e-10,24;UBERON:0003350,1.45e-09,9;UBERON:0004808,1.45e-09,9;UBERON:0001277,1.45e-09,9;UBERON:0005177,1.78e-09,79;UBERON:0002100,6.27e-08,90;UBERON:0000485,2.02e-07,11;UBERON:0009569,7.94e-07,66 | |||
|phase1_expression=0,5.93258192986914,11.8299802241279,8.46899791659124,10.5188103288733,2.35030980676646,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,4.7997726838022,2.75291137280604,3.44539178469012,6.8921919385452,6.03319451520489,6.84084310042946,5.29263272495855,6.87364583031445,0,0,0,1.44425809875637,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,2.03991400112325,3.77792234146472,2.59910566979068,0.448026887097336,1.68533304158102,0,0,0,0,0,0,0,0.432982082022428,1.26679932737549,1.01104889002957,2.51204535381932,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.97755974187499,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.746441823660558,3.79084137650512,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,5.55346189993443,0.213288250535234,0.464473343720877,0.77320476793256,2.01683524623343,3.33567065767305,3.42406127002606,5.69434873853414,4.28217282282428,2.5133520880027,3.97912944082302,3.8992817423824,4.49409704327111,4.97117514711797,5.57595565112228,0.189667900953082,0.913988100877831,0,1.4255592949172,1.74557238450863,1.68325967736765,2.40298841072178,4.57591458736767,4.55296310739987,5.67626954040282,2.07516838961004,0.333690211432188,0.393117990226406,0,0,0.964708639009667,0.763877555344259,0.575392274901621,2.10775794807546,5.21666685057355,1.43768206527355,2.60498663367952,2.80833905803104,2.27320990152401,3.04975602987251,2.41221760681684,1.47802552133284,0,0.325929952884052,0,0.469380496577004,1.17254380209271,1.6663054862021,1.17080188714679,1.10344600874334,0.8858587585951,1.11618338060241,0.983179888294428,0.690739927463582,0.867894351489069,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,2.47455184458803,2.65490276679926,0.485561272309963,0.302323556964751,0.377210159511796,1.77181135728464,2.15204603560749,1.03371317267288,0.727067458955011,0.712994756769443,1.26414703174326,4.21674434299995,2.06271086496374,0,0,0,0,0,0,0,0.304464949114599,0,0,6.17479514553893,0,0,0,0,0,4.37221254944776,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,1.01659733563424,0.756037385752609,0.627264888043406,1.09181281873089,0.674321731924103,1.57041565878138,1.83229159388821,4.40690909192096,1.24267862617385,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,1.9318959403219,0.563047426353546,1.09890974560359,0.214368379079066,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.579421629724277,0.192909220463705,0,0.441596760403192,1.02860775715625,0.532427418478012,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,5.93258192986914,11.8299802241279,8.46899791659124,10.5188103288733,2.35030980676646,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,4.7997726838022,2.75291137280604,3.44539178469012,6.8921919385452,6.03319451520489,6.84084310042946,5.29263272495855,6.87364583031445,0,0,0,1.44425809875637,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,2.03991400112325,3.77792234146472,2.59910566979068,0.448026887097336,1.68533304158102,0,0,0,0,0,0,0,0.432982082022428,1.26679932737549,1.01104889002957,2.51204535381932,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.97755974187499,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.746441823660558,3.79084137650512,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,5.55346189993443,0.213288250535234,0.464473343720877,0.77320476793256,2.01683524623343,3.33567065767305,3.42406127002606,5.69434873853414,4.28217282282428,2.5133520880027,3.97912944082302,3.8992817423824,4.49409704327111,4.97117514711797,5.57595565112228,0.189667900953082,0.913988100877831,0,1.4255592949172,1.74557238450863,1.68325967736765,2.40298841072178,4.57591458736767,4.55296310739987,5.67626954040282,2.07516838961004,0.333690211432188,0.393117990226406,0,0,0.964708639009667,0.763877555344259,0.575392274901621,2.10775794807546,5.21666685057355,1.43768206527355,2.60498663367952,2.80833905803104,2.27320990152401,3.04975602987251,2.41221760681684,1.47802552133284,0,0.325929952884052,0,0.469380496577004,1.17254380209271,1.6663054862021,1.17080188714679,1.10344600874334,0.8858587585951,1.11618338060241,0.983179888294428,0.690739927463582,0.867894351489069,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,2.47455184458803,2.65490276679926,0.485561272309963,0.302323556964751,0.377210159511796,1.77181135728464,2.15204603560749,1.03371317267288,0.727067458955011,0.712994756769443,1.26414703174326,4.21674434299995,2.06271086496374,0,0,0,0,0,0,0,0.304464949114599,0,0,6.17479514553893,0,0,0,0,0,4.37221254944776,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,1.01659733563424,0.756037385752609,0.627264888043406,1.09181281873089,0.674321731924103,1.57041565878138,1.83229159388821,4.40690909192096,1.24267862617385,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,1.9318959403219,0.563047426353546,1.09890974560359,0.214368379079066,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.579421629724277,0.192909220463705,0,0.441596760403192,1.02860775715625,0.532427418478012,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p2@Igsf5 | |||
}} | }} |
Latest revision as of 22:11, 25 September 2015
Short description: | p2@Igsf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Igsf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 11bp_to_ENSMUST00000000163, ENSMUST00000081093, ENSMUST00000113795_5end |
EntrezGene: | Igsf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.45e-09 | 9 |
epithelial cell of alimentary canal | 1.45e-09 | 9 |
epithelial cell | 1.53e-09 | 25 |
brush border epithelial cell | 4.02e-08 | 6 |
gut absorptive cell | 4.02e-08 | 6 |
enterocyte | 4.02e-08 | 6 |
endodermal cell | 5.94e-08 | 20 |
endo-epithelial cell | 5.97e-07 | 15 |
columnar/cuboidal epithelial cell | 8.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.43e-24 | 31 |
digestive system | 2.46e-19 | 116 |
digestive tract | 2.46e-19 | 116 |
primitive gut | 2.46e-19 | 116 |
gastrointestinal system | 8.73e-19 | 47 |
endoderm-derived structure | 1.01e-18 | 118 |
endoderm | 1.01e-18 | 118 |
presumptive endoderm | 1.01e-18 | 118 |
subdivision of digestive tract | 9.43e-18 | 114 |
mucosa | 1.64e-16 | 15 |
intestinal mucosa | 1.68e-14 | 13 |
wall of intestine | 1.68e-14 | 13 |
gastrointestinal system mucosa | 1.68e-14 | 13 |
organ component layer | 8.77e-10 | 24 |
epithelium of mucosa | 1.45e-09 | 9 |
gastrointestinal system epithelium | 1.45e-09 | 9 |
intestinal epithelium | 1.45e-09 | 9 |
trunk region element | 1.78e-09 | 79 |
trunk | 6.27e-08 | 90 |
simple columnar epithelium | 2.02e-07 | 11 |
subdivision of trunk | 7.94e-07 | 66 |