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FFCP PHASE1:Mm9::chr5:27230997..27231021,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13483
|EntrezGene=13483
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q5U4C2
|UniProt=Q5U4C2
|association_with_transcript=-213bp_to_ENSMUST00000120555_5end
|association_with_transcript=-213bp_to_ENSMUST00000120555_5end
|cluster_id=chr5:27230997..27231021,+
|description=CAGE_peak_9_at_Dpp6_5end
|description=CAGE_peak_9_at_Dpp6_5end
|id=chr5:27230997..27231021,+
|id=chr5:27230997..27231021,+
|ontology_enrichment_celltype=CL:0000117!4.27e-16!23;CL:0000337!4.27e-16!23;CL:0000540!7.41e-10!33;CL:0000047!7.41e-10!33;CL:0000031!7.41e-10!33;CL:0000404!7.41e-10!33;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0002319!5.46e-07!43;CL:0000393!7.18e-07!39;CL:0000211!7.18e-07!39
|ontology_enrichment_celltype=CL:0000117!4.27e-16!23;CL:0000337!4.27e-16!23;CL:0000540!7.41e-10!33;CL:0000047!7.41e-10!33;CL:0000031!7.41e-10!33;CL:0000404!7.41e-10!33;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0002319!5.46e-07!43;CL:0000393!7.18e-07!39;CL:0000211!7.18e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-22,23;CL:0000337,2.45e-22,23;CL:0000540,1.21e-13,33;CL:0000047,1.21e-13,33;CL:0000031,1.21e-13,33;CL:0000404,1.21e-13,33;CL:0000393,1.28e-10,39;CL:0000211,1.28e-10,39;CL:0002319,4.31e-09,43;CL:0000221,9.34e-09,44;CL:0000133,9.34e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.51e-23!52;UBERON:0005068!5.51e-23!52;UBERON:0006241!5.51e-23!52;UBERON:0007135!5.51e-23!52;UBERON:0000955!6.20e-21!50;UBERON:0006238!6.20e-21!50;UBERON:0001017!2.33e-20!73;UBERON:0005743!2.33e-20!73;UBERON:0002616!3.02e-20!49;UBERON:0000073!3.97e-20!75;UBERON:0001016!3.97e-20!75;UBERON:0000033!1.63e-17!63;UBERON:0002346!3.07e-16!71;UBERON:0003075!3.07e-16!71;UBERON:0007284!3.07e-16!71;UBERON:0003080!1.93e-15!40;UBERON:0002780!9.69e-15!39;UBERON:0001890!9.69e-15!39;UBERON:0006240!9.69e-15!39;UBERON:0004121!1.05e-14!102;UBERON:0000924!1.05e-14!102;UBERON:0006601!1.05e-14!102;UBERON:0002020!6.18e-14!34;UBERON:0003056!1.01e-12!49;UBERON:0002791!4.07e-10!29;UBERON:0003528!4.07e-10!29;UBERON:0001893!4.07e-10!29;UBERON:0003076!2.08e-08!12;UBERON:0003057!2.08e-08!12;UBERON:0007811!2.60e-08!86;UBERON:0000153!3.85e-07!94;UBERON:0002420!6.25e-07!8;UBERON:0007245!6.25e-07!8;UBERON:0010009!6.25e-07!8;UBERON:0010011!6.25e-07!8;UBERON:0000454!6.25e-07!8
|ontology_enrichment_uberon=UBERON:0001049!5.51e-23!52;UBERON:0005068!5.51e-23!52;UBERON:0006241!5.51e-23!52;UBERON:0007135!5.51e-23!52;UBERON:0000955!6.20e-21!50;UBERON:0006238!6.20e-21!50;UBERON:0001017!2.33e-20!73;UBERON:0005743!2.33e-20!73;UBERON:0002616!3.02e-20!49;UBERON:0000073!3.97e-20!75;UBERON:0001016!3.97e-20!75;UBERON:0000033!1.63e-17!63;UBERON:0002346!3.07e-16!71;UBERON:0003075!3.07e-16!71;UBERON:0007284!3.07e-16!71;UBERON:0003080!1.93e-15!40;UBERON:0002780!9.69e-15!39;UBERON:0001890!9.69e-15!39;UBERON:0006240!9.69e-15!39;UBERON:0004121!1.05e-14!102;UBERON:0000924!1.05e-14!102;UBERON:0006601!1.05e-14!102;UBERON:0002020!6.18e-14!34;UBERON:0003056!1.01e-12!49;UBERON:0002791!4.07e-10!29;UBERON:0003528!4.07e-10!29;UBERON:0001893!4.07e-10!29;UBERON:0003076!2.08e-08!12;UBERON:0003057!2.08e-08!12;UBERON:0007811!2.60e-08!86;UBERON:0000153!3.85e-07!94;UBERON:0002420!6.25e-07!8;UBERON:0007245!6.25e-07!8;UBERON:0010009!6.25e-07!8;UBERON:0010011!6.25e-07!8;UBERON:0000454!6.25e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.32e-27,54;UBERON:0001049,1.29e-24,52;UBERON:0005068,1.29e-24,52;UBERON:0006241,1.29e-24,52;UBERON:0007135,1.29e-24,52;UBERON:0001017,2.54e-24,73;UBERON:0001016,2.43e-23,75;UBERON:0000955,3.23e-18,47;UBERON:0006238,3.23e-18,47;UBERON:0002346,4.90e-18,64;UBERON:0003075,4.90e-18,64;UBERON:0007284,4.90e-18,64;UBERON:0002616,3.02e-17,46;UBERON:0004121,7.35e-16,95;UBERON:0000924,7.35e-16,95;UBERON:0006601,7.35e-16,95;UBERON:0010371,1.47e-14,73;UBERON:0002020,4.71e-14,34;UBERON:0003080,6.03e-14,40;UBERON:0002780,5.71e-13,39;UBERON:0001890,5.71e-13,39;UBERON:0006240,5.71e-13,39;UBERON:0003076,1.32e-12,12;UBERON:0003057,1.32e-12,12;UBERON:0002420,7.66e-11,8;UBERON:0007245,7.66e-11,8;UBERON:0010009,7.66e-11,8;UBERON:0010011,7.66e-11,8;UBERON:0000454,7.66e-11,8;UBERON:0002240,3.27e-10,6;UBERON:0005174,3.27e-10,6;UBERON:0001137,3.27e-10,6;UBERON:0003056,3.89e-10,49;UBERON:0010314,1.51e-09,92;UBERON:0001948,9.13e-09,5;UBERON:0002315,9.13e-09,5;UBERON:0003528,1.11e-08,29;UBERON:0002791,1.11e-08,29;UBERON:0001893,1.11e-08,29;UBERON:0000369,1.63e-07,5;UBERON:0002435,1.63e-07,5;UBERON:0000204,1.63e-07,5;UBERON:0010082,1.63e-07,5
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.420649922702764,5.42736870367227,5.74258206474195,3.1847607795888,2.49198224647415,5.51531271966013,6.60695285996332,3.44755812830007,3.84016333140609,2.50583946687368,2.47016637726506,1.56274011167028,1.3959149950069,3.37657566019008,4.27835093775068,7.95497180778903,8.39992916714707,5.77838282058432,0,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0,1.03575153458869,0,0,0.608930956624282,0,0.301445281105245,0.117588707135705,0,0,0,0,0.485300549842228,0.220841518460394,0,0,4.68449275218475,4.39838084308256,0,0,0,0,3.59497534571574,4.57500602818627,7.03664371832041,1.73824320192276,1.53429274398198,5.81806524766768,3.89379031362618,0,0,0.505445516867349,0,0,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,6.26147300952389,5.74337264301796,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,2.24924921495265,0.99358059645788,0,0,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,1.24138163549592,1.42695054081656,1.64549020602121,2.74018454203139,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,5.93360966433631,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,1.6942555278512,0,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0.798049746802062,0.170733605754134,0.729320151204882,0,1.65459157605013,1.33348036680969,1.44224540067226,1.28367683836726,0.758091635291392,1.77435509923168,1.32038438970253,1.21733959710847,1.28050304809739,1.20614484806788,1.90517476513229,0.811190281613988,1.15745532278223,0,1.32479028120958,2.05721551431249,0.354951612318675,0.953744759789284,1.16277133305863,2.07040636913727,1.35383372626682,1.82927972872773,1.31534855718921,0.950628796921032,1.12228454331548,1.18635018124174,1.18205378850676,3.6830793885272,1.39443157067369,1.15743966588685,2.24829520144151,1.87145286756327,1.07435527024149,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.420649922702764,5.42736870367227,5.74258206474195,3.1847607795888,2.49198224647415,5.51531271966013,6.60695285996332,3.44755812830007,3.84016333140609,2.50583946687368,2.47016637726506,1.56274011167028,1.3959149950069,3.37657566019008,4.27835093775068,7.95497180778903,8.39992916714707,5.77838282058432,0,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0,1.03575153458869,0,0,0.608930956624282,0,0.301445281105245,0.117588707135705,0,0,0,0,0.485300549842228,0.220841518460394,0,0,4.68449275218475,4.39838084308256,0,0,0,0,3.59497534571574,4.57500602818627,7.03664371832041,1.73824320192276,1.53429274398198,5.81806524766768,3.89379031362618,0,0,0.505445516867349,0,0,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,6.26147300952389,5.74337264301796,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,2.24924921495265,0.99358059645788,0,0,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,1.24138163549592,1.42695054081656,1.64549020602121,2.74018454203139,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,5.93360966433631,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,1.6942555278512,0,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0.798049746802062,0.170733605754134,0.729320151204882,0,1.65459157605013,1.33348036680969,1.44224540067226,1.28367683836726,0.758091635291392,1.77435509923168,1.32038438970253,1.21733959710847,1.28050304809739,1.20614484806788,1.90517476513229,0.811190281613988,1.15745532278223,0,1.32479028120958,2.05721551431249,0.354951612318675,0.953744759789284,1.16277133305863,2.07040636913727,1.35383372626682,1.82927972872773,1.31534855718921,0.950628796921032,1.12228454331548,1.18635018124174,1.18205378850676,3.6830793885272,1.39443157067369,1.15743966588685,2.24829520144151,1.87145286756327,1.07435527024149,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p9@Dpp6
|short_description=p9@Dpp6
}}
}}

Latest revision as of 21:14, 25 September 2015

Short description:p9@Dpp6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Dpp6_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: -213bp_to_ENSMUST00000120555_5end
EntrezGene:Dpp6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Dpp6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.45e-2223
neuroblast (sensu Vertebrata)2.45e-2223
neuron1.21e-1333
neuronal stem cell1.21e-1333
neuroblast1.21e-1333
electrically signaling cell1.21e-1333
electrically responsive cell1.28e-1039
electrically active cell1.28e-1039
neural cell4.31e-0943
ectodermal cell9.34e-0944
neurectodermal cell9.34e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.32e-2754
neural tube1.29e-2452
neural rod1.29e-2452
future spinal cord1.29e-2452
neural keel1.29e-2452
central nervous system2.54e-2473
nervous system2.43e-2375
brain3.23e-1847
future brain3.23e-1847
neurectoderm4.90e-1864
neural plate4.90e-1864
presumptive neural plate4.90e-1864
regional part of brain3.02e-1746
ectoderm-derived structure7.35e-1695
ectoderm7.35e-1695
presumptive ectoderm7.35e-1695
ecto-epithelium1.47e-1473
gray matter4.71e-1434
anterior neural tube6.03e-1440
regional part of forebrain5.71e-1339
forebrain5.71e-1339
future forebrain5.71e-1339
posterior neural tube1.32e-1212
chordal neural plate1.32e-1212
basal ganglion7.66e-118
nuclear complex of neuraxis7.66e-118
aggregate regional part of brain7.66e-118
collection of basal ganglia7.66e-118
cerebral subcortex7.66e-118
spinal cord3.27e-106
dorsal region element3.27e-106
dorsum3.27e-106
pre-chordal neural plate3.89e-1049
structure with developmental contribution from neural crest1.51e-0992
regional part of spinal cord9.13e-095
gray matter of spinal cord9.13e-095
brain grey matter1.11e-0829
regional part of telencephalon1.11e-0829
telencephalon1.11e-0829
corpus striatum1.63e-075
striatum1.63e-075
ventral part of telencephalon1.63e-075
future corpus striatum1.63e-075
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