FFCP PHASE1:Mm9::chr5:24414378..24414401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108099 | |EntrezGene=108099 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=966 | |MCL_coexpression_id=966 | ||
|TSSclassifier=NA | |||
|UniProt=D3YUS1,Q8BIQ9,Q3TMN8,Q91WG5 | |UniProt=D3YUS1,Q8BIQ9,Q3TMN8,Q91WG5 | ||
|association_with_transcript=-51bp_to_ENSMUST00000150135,NM_001170555,NM_001170556,uc008wsk.2,uc008wsn.2,uc012dtj.1_5end | |association_with_transcript=-51bp_to_ENSMUST00000150135,NM_001170555,NM_001170556,uc008wsk.2,uc008wsn.2,uc012dtj.1_5end | ||
|cluster_id=chr5:24414378..24414401,- | |||
|description=CAGE_peak_9_at_Prkag2_5end | |description=CAGE_peak_9_at_Prkag2_5end | ||
|id=chr5:24414378..24414401,- | |id=chr5:24414378..24414401,- | ||
|ontology_enrichment_celltype=CL:0000117!1.49e-11!23;CL:0000337!1.49e-11!23;CL:0000540!2.48e-09!33;CL:0000047!2.48e-09!33;CL:0000031!2.48e-09!33;CL:0000404!2.48e-09!33;CL:0002319!1.29e-08!43;CL:0000221!2.56e-08!44;CL:0000133!2.56e-08!44 | |ontology_enrichment_celltype=CL:0000117!1.49e-11!23;CL:0000337!1.49e-11!23;CL:0000540!2.48e-09!33;CL:0000047!2.48e-09!33;CL:0000031!2.48e-09!33;CL:0000404!2.48e-09!33;CL:0002319!1.29e-08!43;CL:0000221!2.56e-08!44;CL:0000133!2.56e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.65e-21,23;CL:0000337,7.65e-21,23;CL:0000540,8.75e-14,33;CL:0000047,8.75e-14,33;CL:0000031,8.75e-14,33;CL:0000404,8.75e-14,33;CL:0002319,2.13e-12,43;CL:0000221,6.15e-12,44;CL:0000133,6.15e-12,44;CL:0000393,1.37e-10,39;CL:0000211,1.37e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.32e-16!73;UBERON:0005743!5.32e-16!73;UBERON:0001049!5.52e-16!52;UBERON:0005068!5.52e-16!52;UBERON:0006241!5.52e-16!52;UBERON:0007135!5.52e-16!52;UBERON:0002020!2.81e-15!34;UBERON:0000073!3.39e-15!75;UBERON:0001016!3.39e-15!75;UBERON:0000955!4.91e-14!50;UBERON:0006238!4.91e-14!50;UBERON:0002616!4.95e-14!49;UBERON:0007811!1.58e-13!86;UBERON:0002791!2.67e-12!29;UBERON:0003528!2.67e-12!29;UBERON:0001893!2.67e-12!29;UBERON:0000153!3.77e-12!94;UBERON:0000033!1.84e-11!63;UBERON:0003080!2.06e-11!40;UBERON:0002346!2.44e-11!71;UBERON:0003075!2.44e-11!71;UBERON:0007284!2.44e-11!71;UBERON:0002780!2.54e-11!39;UBERON:0001890!2.54e-11!39;UBERON:0006240!2.54e-11!39;UBERON:0004121!1.92e-10!102;UBERON:0000924!1.92e-10!102;UBERON:0006601!1.92e-10!102;UBERON:0003056!8.25e-10!49;UBERON:0000956!9.43e-08!21;UBERON:0001869!9.43e-08!21;UBERON:0000203!9.43e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!5.32e-16!73;UBERON:0005743!5.32e-16!73;UBERON:0001049!5.52e-16!52;UBERON:0005068!5.52e-16!52;UBERON:0006241!5.52e-16!52;UBERON:0007135!5.52e-16!52;UBERON:0002020!2.81e-15!34;UBERON:0000073!3.39e-15!75;UBERON:0001016!3.39e-15!75;UBERON:0000955!4.91e-14!50;UBERON:0006238!4.91e-14!50;UBERON:0002616!4.95e-14!49;UBERON:0007811!1.58e-13!86;UBERON:0002791!2.67e-12!29;UBERON:0003528!2.67e-12!29;UBERON:0001893!2.67e-12!29;UBERON:0000153!3.77e-12!94;UBERON:0000033!1.84e-11!63;UBERON:0003080!2.06e-11!40;UBERON:0002346!2.44e-11!71;UBERON:0003075!2.44e-11!71;UBERON:0007284!2.44e-11!71;UBERON:0002780!2.54e-11!39;UBERON:0001890!2.54e-11!39;UBERON:0006240!2.54e-11!39;UBERON:0004121!1.92e-10!102;UBERON:0000924!1.92e-10!102;UBERON:0006601!1.92e-10!102;UBERON:0003056!8.25e-10!49;UBERON:0000956!9.43e-08!21;UBERON:0001869!9.43e-08!21;UBERON:0000203!9.43e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.50e-27,34;UBERON:0000073,2.50e-24,54;UBERON:0001049,1.32e-22,52;UBERON:0005068,1.32e-22,52;UBERON:0006241,1.32e-22,52;UBERON:0007135,1.32e-22,52;UBERON:0003528,1.17e-21,29;UBERON:0002791,1.17e-21,29;UBERON:0001893,1.17e-21,29;UBERON:0001017,6.43e-20,73;UBERON:0001016,4.96e-19,75;UBERON:0002346,1.87e-18,64;UBERON:0003075,1.87e-18,64;UBERON:0007284,1.87e-18,64;UBERON:0002780,5.50e-18,39;UBERON:0001890,5.50e-18,39;UBERON:0006240,5.50e-18,39;UBERON:0003080,2.61e-17,40;UBERON:0002616,1.03e-16,46;UBERON:0010314,3.25e-16,92;UBERON:0000955,3.72e-16,47;UBERON:0006238,3.72e-16,47;UBERON:0010371,1.04e-14,73;UBERON:0003056,1.63e-13,49;UBERON:0004121,4.52e-13,95;UBERON:0000924,4.52e-13,95;UBERON:0006601,4.52e-13,95;UBERON:0000956,4.86e-13,21;UBERON:0001869,4.86e-13,21;UBERON:0000203,4.86e-13,21;UBERON:0002420,2.86e-10,8;UBERON:0007245,2.86e-10,8;UBERON:0010009,2.86e-10,8;UBERON:0010011,2.86e-10,8;UBERON:0000454,2.86e-10,8;UBERON:0002619,2.48e-09,17;UBERON:0000025,3.77e-09,114;UBERON:0004111,6.49e-09,122;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0000369,7.85e-08,5;UBERON:0002435,7.85e-08,5;UBERON:0000204,7.85e-08,5;UBERON:0010082,7.85e-08,5;UBERON:0001948,5.74e-07,5;UBERON:0002315,5.74e-07,5 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,0,0,0.16787927191189,0,1.54947988129892,0.422366166455,0.468129052643987,0.68487187290202,0.638177271962691,0.684802919724823,1.13646523144697,0,0.202475267389826,0,0.946386496074713,0.685572168028694,0,0.425216450755349,0.198581902401771,0,0,0.45881856213434,0,0.430761996159075,0.646413698057667,0.380046838912748,0,0.221730510655305,0.635030673459631,0,15.8481681015439,0,0,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0.971020706062307,0,0.101376931219515,0,0.782391344348039,1.74420125104357,1.97717564461025,1.55543919259427,0.55994568650145,0,0.167782606057736,0,1.00828139742739,0,0,0,2.42779753031517,3.70293685490423,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,2.28117147078651,2.29510095163874,2.73422449756797,1.42825492201902,2.20868540951614,1.34739879136449,1.82106394934649,0,2.20231761998777,1.53224805702225,1.38245879930619,2.90149833006426,3.11057988248193,2.6045668527838,1.3959149950069,2.8138130501584,1.22238598221448,3.24091444021034,3.27454865837937,2.05039390407831,0.227178579999552,0.226714680320357,0,0,0.679971333707751,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,1.01343946190039,0,0.45673551887624,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.470354828542819,0.251333182659351,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,0.748953197024114,3.66000482254901,6.40837195775608,1.04294592115366,2.04572365864264,1.0389402227978,1.94689515681309,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,1.17108398666433,0.229902104433473,0.540186389416048,0.150704817835715,0.612328492361951,0.2562274405697,0.655912071918102,0.517406741478031,0.646703978798527,0.378212160335639,0.351902248327898,0.657587197282725,0.278047249225598,0,0.411564272815887,0.796137067273973,0.702213187313235,0.257347907114715,0.284163499395593,1.03562886267751,1.64168241986767,1.98068267607116,1.42046841351126,1.96764231747404,1.07986979021165,0.930135779001631,1.3413670069981,0.583826711835847,1.6455984991348,0.985004784474571,0.891756905004413,0.146199987425332,0,0.402619256281115,1.47202963994889,2.26390147234426,0,0.793351699990633,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.444756087689741,0.760902504450237,0.474529061544512,1.4822905925161,1.25667604400135,0.198956472041151,1.36474860983384,0,0.432276099749388,0.199141273254367,1.13800740571849,0.456994050438915,1.1270773567308,0.203651327845314,1.35766741017338,1.1221731182451,0.758838445491087,0.295220295959204,0.470996183524124,0.123397163921801,0,0.500535317148282,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0.788175720530955,0,0.318909537314974,0.655453258862952,0.345369963731791,0,0,0,0,0.275936746304732,2.24770825982909,0.468846746368813,0.491804836130026,0,0.315508219416257,1.56175497718655,0.215423397732799,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.720244376125241,0.776152102696527,0.643011105094777,1.24138163549592,0.535106452806212,0.493647061806363,0,0,0,0.220528398054962,0.98931751764888,0.645857706783622,0.482503399425247,0.596861720015682,0.820704498725306,0.291480836629851,1.8542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.790839983952838,0.203319467126849,0.756037385752609,0.209088296014469,0.655087691238533,0.404593039154462,0.247960367176008,0,0.777689839750757,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,0.129159823477731,0,0.469428954583016,0.13020438484395,0.524296722128554,0,0,1.26404448251271,0.405450430580328,0.821687657318618,2.07873316764472,1.43221356533985,0.596044064343795,1.9231271923195,1.18151621739662,0.908698049533329,1.600342939755,1.61321896218945,0.779663045918019,0.865906574762965,0.467507608726276,0.453460767230423,0,0.179427713218951,0,1.54551675225752,0.93841237725591,0.183151624267265,0.428736758158132,1.00314420807073,3.3885110557024,1.84130094602871,0,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,1.35096360967266,0.906284817968409,1.03552062350364,0.830298780673413,1.99512436700516,1.19513524027894,0.729320151204882,0.838452650511929,1.10306105070008,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,1.2673964994512,0.943131706930381,0.3745660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| ||
|short_description=p9@Prkag2 | |short_description=p9@Prkag2 | ||
}} | }} |
Latest revision as of 20:54, 25 September 2015
Short description: | p9@Prkag2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Prkag2_5end |
Coexpression cluster: | MCL_coexpression_mm9:966 |
Association with transcript: | -51bp_to_ENSMUST00000150135, NM_001170555, NM_001170556, uc008wsk.2, uc008wsn.2, uc012dtj.1_5end |
EntrezGene: | Prkag2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.65e-21 | 23 |
neuroblast (sensu Vertebrata) | 7.65e-21 | 23 |
neuron | 8.75e-14 | 33 |
neuronal stem cell | 8.75e-14 | 33 |
neuroblast | 8.75e-14 | 33 |
electrically signaling cell | 8.75e-14 | 33 |
neural cell | 2.13e-12 | 43 |
ectodermal cell | 6.15e-12 | 44 |
neurectodermal cell | 6.15e-12 | 44 |
electrically responsive cell | 1.37e-10 | 39 |
electrically active cell | 1.37e-10 | 39 |