FFCP PHASE1:Mm9::chr19:4498532..4498543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69861 | |EntrezGene=69861 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VC23 | |UniProt=Q8VC23 | ||
|association_with_transcript=39bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end | |association_with_transcript=39bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end | ||
|cluster_id=chr19:4498532..4498543,- | |||
|description=CAGE_peak_3_at_2010003K11Rik_5end | |description=CAGE_peak_3_at_2010003K11Rik_5end | ||
|id=chr19:4498532..4498543,- | |id=chr19:4498532..4498543,- | ||
|ontology_enrichment_celltype=CL:0000239!5.08e-09!6;CL:0000677!5.08e-09!6;CL:0000212!5.08e-09!6;CL:0000584!5.08e-09!6;CL:0000075!1.50e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.55e-15,6;CL:0000677,1.55e-15,6;CL:0000584,1.55e-15,6;CL:0000075,3.25e-13,7;CL:0002563,4.06e-10,9;CL:0002251,4.06e-10,9;CL:0000682,4.54e-09,3;CL:0000066,8.23e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.25e-16!43;UBERON:0005409!8.28e-13!59;UBERON:0000344!2.52e-12!15;UBERON:0001242!6.12e-10!13;UBERON:0000060!6.12e-10!13;UBERON:0001262!6.12e-10!13;UBERON:0004786!6.12e-10!13;UBERON:0004923!1.31e-07!24;UBERON:0001007!9.65e-07!128;UBERON:0001555!9.65e-07!128;UBERON:0007026!9.65e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.19e-43,31;UBERON:0005409,5.34e-29,47;UBERON:0000344,6.52e-23,15;UBERON:0001242,2.23e-18,13;UBERON:0001262,2.23e-18,13;UBERON:0004786,2.23e-18,13;UBERON:0004923,1.30e-15,24;UBERON:0001007,1.38e-12,116;UBERON:0001555,1.38e-12,116;UBERON:0007026,1.38e-12,116;UBERON:0004119,2.89e-12,118;UBERON:0000925,2.89e-12,118;UBERON:0006595,2.89e-12,118;UBERON:0004921,1.42e-10,114;UBERON:0002108,3.13e-10,4;UBERON:0003350,4.06e-10,9;UBERON:0004808,4.06e-10,9;UBERON:0001277,4.06e-10,9;UBERON:0000485,3.81e-08,11;UBERON:0000331,7.00e-08,3;UBERON:0002116,7.00e-08,3;UBERON:0001204,7.00e-08,3;UBERON:0001168,7.00e-08,3 | |||
|phase1_expression=0,10.1202868215415,18.1999695755814,11.4936400296595,12.5223932486587,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.42345986988076,14.3557991028755,8.61523992318149,7.11055067863434,4.18051522804023,4.78857246543868,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39985666853875,0.539703191637817,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0.445326417194474,0,0.304465478312141,0,0.301445281105245,0,0.376999773989026,2.47194967734374,0,0,0,0,0,3.72783522436244,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,13.7514294665043,0,0,0,0.403367049246685,1.33426826306922,3.42406127002606,10.4396393539793,8.39964669092456,5.7807098024062,6.16765063327568,6.62877896205008,2.69645822596266,5.40345124686736,5.17767310461355,0,0,0,0,0.193952487167626,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,0,1.48856379067401,0,0.505157755894224,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,1.12228454331548,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,10.1202868215415,18.1999695755814,11.4936400296595,12.5223932486587,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.42345986988076,14.3557991028755,8.61523992318149,7.11055067863434,4.18051522804023,4.78857246543868,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39985666853875,0.539703191637817,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0.445326417194474,0,0.304465478312141,0,0.301445281105245,0,0.376999773989026,2.47194967734374,0,0,0,0,0,3.72783522436244,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,13.7514294665043,0,0,0,0.403367049246685,1.33426826306922,3.42406127002606,10.4396393539793,8.39964669092456,5.7807098024062,6.16765063327568,6.62877896205008,2.69645822596266,5.40345124686736,5.17767310461355,0,0,0,0,0.193952487167626,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,0,1.48856379067401,0,0.505157755894224,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,1.12228454331548,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p3@2010003K11Rik | |short_description=p3@2010003K11Rik | ||
}} | }} |
Latest revision as of 20:20, 25 September 2015
Short description: | p3@2010003K11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2010003K11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 39bp_to_ENSMUST00000048482, NM_027237, uc008gae.1_5end |
EntrezGene: | 2010003K11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.55e-15 | 6 |
gut absorptive cell | 1.55e-15 | 6 |
enterocyte | 1.55e-15 | 6 |
columnar/cuboidal epithelial cell | 3.25e-13 | 7 |
intestinal epithelial cell | 4.06e-10 | 9 |
epithelial cell of alimentary canal | 4.06e-10 | 9 |
M cell of gut | 4.54e-09 | 3 |
epithelial cell | 8.23e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.19e-43 | 31 |
gastrointestinal system | 5.34e-29 | 47 |
mucosa | 6.52e-23 | 15 |
intestinal mucosa | 2.23e-18 | 13 |
wall of intestine | 2.23e-18 | 13 |
gastrointestinal system mucosa | 2.23e-18 | 13 |
organ component layer | 1.30e-15 | 24 |
digestive system | 1.38e-12 | 116 |
digestive tract | 1.38e-12 | 116 |
primitive gut | 1.38e-12 | 116 |
endoderm-derived structure | 2.89e-12 | 118 |
endoderm | 2.89e-12 | 118 |
presumptive endoderm | 2.89e-12 | 118 |
subdivision of digestive tract | 1.42e-10 | 114 |
small intestine | 3.13e-10 | 4 |
epithelium of mucosa | 4.06e-10 | 9 |
gastrointestinal system epithelium | 4.06e-10 | 9 |
intestinal epithelium | 4.06e-10 | 9 |
simple columnar epithelium | 3.81e-08 | 11 |
ileal mucosa | 7.00e-08 | 3 |
ileum | 7.00e-08 | 3 |
mucosa of small intestine | 7.00e-08 | 3 |
wall of small intestine | 7.00e-08 | 3 |