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FFCP PHASE1:Mm9::chr3:88425066..88425095,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16800
|EntrezGene=16800
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=Q60875
|UniProt=Q60875
|association_with_transcript=38bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end
|association_with_transcript=38bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end
|cluster_id=chr3:88425066..88425095,+
|description=CAGE_peak_1_at_Arhgef2_5end
|description=CAGE_peak_1_at_Arhgef2_5end
|id=chr3:88425066..88425095,+
|id=chr3:88425066..88425095,+
|ontology_enrichment_celltype=CL:0000988!5.93e-10!32;CL:0002032!5.93e-10!32;CL:0000037!5.93e-10!32;CL:0000566!5.93e-10!32;CL:0000837!5.93e-10!32;CL:0000738!1.21e-08!17;CL:0002087!1.21e-08!17;CL:0000838!2.49e-07!12;CL:0000542!2.56e-07!13;CL:0000051!2.56e-07!13;CL:0000084!5.87e-07!11;CL:0000827!5.87e-07!11;CL:0002031!7.60e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,5.84e-10,32;CL:0002032,5.84e-10,32;CL:0000037,5.84e-10,32;CL:0000837,5.84e-10,32;CL:0000738,1.21e-08,17;CL:0002087,1.21e-08,17;CL:0000838,2.49e-07,12;CL:0000542,2.56e-07,13;CL:0000051,2.56e-07,13;CL:0000084,5.87e-07,11;CL:0000827,5.87e-07,11;CL:0002031,7.50e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!9.68e-15!45;UBERON:0003061!9.68e-15!45;UBERON:0002193!4.26e-14!48;UBERON:0000065!6.13e-13!41;UBERON:0003081!8.19e-13!88;UBERON:0001004!2.35e-12!42;UBERON:0004177!1.03e-09!29;UBERON:0002370!1.85e-09!23;UBERON:0000974!1.85e-09!23;UBERON:0004807!1.85e-09!23;UBERON:0005058!1.85e-09!23;UBERON:0003351!1.85e-09!23;UBERON:0009113!1.85e-09!23;UBERON:0003295!1.85e-09!23;UBERON:0009722!1.85e-09!23;UBERON:0005562!1.85e-09!23;UBERON:0007690!1.85e-09!23;UBERON:0003408!8.77e-09!24;UBERON:0006562!1.60e-08!24;UBERON:0001557!1.60e-08!24;UBERON:0001042!1.60e-08!24;UBERON:0008814!1.60e-08!24;UBERON:0009145!1.60e-08!24;UBERON:0000072!2.70e-08!27
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.68e-15,45;UBERON:0003061,9.68e-15,45;UBERON:0002193,4.26e-14,48;UBERON:0002405,4.26e-14,48;UBERON:0000065,6.13e-13,41;UBERON:0001004,2.35e-12,42;UBERON:0003081,2.38e-12,87;UBERON:0004177,1.03e-09,29;UBERON:0005057,1.03e-09,29;UBERON:0002370,1.85e-09,23;UBERON:0000974,1.85e-09,23;UBERON:0004807,1.85e-09,23;UBERON:0005058,1.85e-09,23;UBERON:0003351,1.85e-09,23;UBERON:0009113,1.85e-09,23;UBERON:0003295,1.85e-09,23;UBERON:0009722,1.85e-09,23;UBERON:0005562,1.85e-09,23;UBERON:0007690,1.85e-09,23;UBERON:0003408,8.77e-09,24;UBERON:0006562,1.60e-08,24;UBERON:0001557,1.60e-08,24;UBERON:0001042,1.60e-08,24;UBERON:0008814,1.60e-08,24;UBERON:0009145,1.60e-08,24;UBERON:0000072,2.70e-08,27;UBERON:0000077,2.60e-07,35
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.2082358534618,7.32916637555283,3.75883422546199,11.8054469486516,0.56369293868419,19.1381178936293,14.2294301793104,17.1117045742762,15.1116993468945,15.3750074196608,17.0167996036343,8.20287624516886,6.92071673209692,1.93267296660805,2.01621004380506,53.4058793861621,32.6387596617164,27.321114605844,26.8936103564036,35.0892323508264,41.5244031492844,37.5009802502303,36.0362446305968,40.4875464292072,33.0737540882699,43.2544334237046,54.4789553335216,49.4528866031293,48.1532836988064,7.02864189207155,20.2007217570399,31.5792775265354,18.4673078000486,10.6254276717705,13.5131382324851,15.5678880627175,11.7902608493486,3.51100472824754,5.0827665835536,5.06357760157895,6.87474616127276,6.35856774671644,2.05524755931193,3.7769694869485,5.40018000185445,5.40385443869065,4.53142408984205,4.65984280576638,32.7968018365998,31.5229649986815,21.1709671135126,25.5262052921709,21.5901557506822,22.9804385562518,24.6693867859793,26.7845574410562,29.2036480728552,22.9954462705056,24.8409713892435,23.9555453560317,20.4138486284344,25.2899351999234,24.6398161819581,21.9095097990214,27.1169322710962,25.6569263216728,20.6042950401653,22.6686337006972,29.8296249575311,25.2015644746259,22.4130018550482,24.8542372441282,22.6803606800947,23.3536317781027,27.8050518766614,27.8853894124113,25.2595651753303,30.3016826695179,24.4388137335799,23.8380847348864,26.1907867628601,21.5362209248493,21.9913536518501,27.728974151112,17.0770074165148,18.0491685400571,26.0152131613627,26.9121531325809,16.9263520002908
|phase1_expression=12.3314612270691,2.79180326111489,5.91499011206397,0,0,10.0727563147134,9.1108929832255,56.4268923439688,94.3284438416167,136.2255543194,49.6532107853964,57.8348152716189,54.955434307917,54.3754903046164,19.6534759471241,15.9955461237963,7.69518065940961,66.2470547252299,65.4035848299374,62.8096684661085,14.7975324862861,50.8369670148533,37.0903700577288,14.2393256286132,9.86459908588831,3.44539178469012,6.03066794622705,5.60225204983311,1.14014051673824,0.756090389279792,5.32153225572731,19.6859508772486,17.221814052368,0,1.44425809875637,1.16364251750945,1.63335485009895,90.4028322391721,76.5708637633324,72.2462766683842,134.705010759102,124.997323747396,100.98615343048,7.55380907853464,6.58950052926845,12.4811791469943,13.3006528539167,17.2239873540553,13.4008571468028,16.7209713203884,13.4386964760348,11.5002051491977,38.9255646053948,34.0920206745332,37.3064117048135,10.0331180054019,7.44986943840768,8.25075347643908,20.2316460859598,23.2756030879694,16.4796164911607,21.6860500524245,13.3394219416671,68.842328372027,87.0202399058937,78.8632927590171,36.5512134832454,26.5110630671873,48.2156697234421,47.6570962310868,48.5850660721692,13.139945282575,11.9269012113871,38.7070925519255,44.6639894944981,51.4762520501612,17.6185409599022,10.3426743849002,10.2916377281683,20.44237459818,16.3762882048313,18.7528813400434,11.725685958058,4.50210088025344,9.16789486660861,10.9012576625257,8.82704420954438,10.2519695203915,17.4170244666323,27.8103341192971,31.0155002910795,5.16254326188832,0,0,1.29955283489534,0.448026887097336,9.55022056895913,12.4414135481982,9.35229616570328,9.18682893726885,5.91542363062058,8.98285341900225,45.8649431471962,28.4426681261332,21.216122019099,24.8292668165597,22.2430755806505,8.22123933977232,53.3412040313174,7.27366481417641,20.471268558404,14.3098774806706,10.8389283710347,9.3448037142626,11.7588707135705,7.1629957057915,8.40462890296871,14.8937337627509,48.6535803572431,25.2356285917958,31.3594956213759,31.0320162006542,0,8.49064311333487,11.1006754611131,6.13096932500619,75.0042679407061,59.9902730993408,54.7672678684909,9.28701964309901,9.60751265919116,19.0994615211554,8.34356736922927,6.39288643325826,12.259494629014,13.1415423084884,19.8586759508117,26.9963126223902,8.08712826987759,5.47148825304832,22.5108366325477,16.5529515192101,23.0479526150847,21.0986744970001,20.8872052394576,22.4199010498487,18.7403449119458,7.76110112217047,29.1016790459337,31.9589275483615,23.929352886297,24.1115305670332,20.019401944243,24.7259038230738,20.1666493679785,22.8889406841267,46.3460703626735,65.1090205000229,50.5811028924155,31.4831174253963,27.2050229578072,23.0479438670099,31.487049832833,32.8596267018164,25.4540736264174,26.9739375910473,22.534965717568,27.4398554562848,23.3674986877142,28.7293062138417,24.8070557210319,23.9767979377545,21.515911298523,27.5123158458762,6.9395683026162,19.6547809644433,2.31293148088659,2.11560453330835,26.0211665652985,26.2427439202296,17.5259747398047,13.3111126251406,15.1217069814512,10.2721838100782,5.69434873853414,7.74085087202851,12.3154252312132,8.95304124185179,8.77338392036041,6.29173586057955,3.45820879799511,4.77939055810481,19.9151296000736,28.3336311272127,31.5581659884625,26.6783239477362,25.7956807932942,25.5995742599663,24.2828302557148,14.465794502001,14.6008816892479,13.3268937035545,3.55743152504579,11.3454671886944,14.545365638377,10.5685192820881,11.3601667977562,11.8176808278684,10.9489116266011,21.0018180339092,11.1873306474774,10.4333337011471,15.814502718009,11.5363693777236,9.98520553966594,4.2938409251009,3.22915344339442,4.82443521363367,29.5605104266567,27.0972718831793,29.6596257124487,37.853154127867,35.9076079881408,43.5516269348721,37.6108952599902,42.1488679372845,45.7141917907954,40.9709675850234,48.4742496718761,34.2474327755892,27.9749670622751,30.0870041849544,36.1899081454253,89.7444378300871,12.2941068254759,11.8652800911035,12.0412942490844,21.2153152731888,9.01642199571715,19.4402613947367,28.7112479668794,28.111589589358,38.3453647964382,32.7387253194996,36.9845798976774,54.3506939114558,45.7436092892631,29.5178416490425,44.2722311300106,13.1741739732941,14.7617688616599,20.6556100254016,20.8495307972577,23.2607873391275,2.65490276679926,16.9946445308487,18.1394134178851,12.6365403436452,19.7852268230118,18.4461088766356,16.5394107627662,15.9954840970102,12.83390562185,6.95280867458795,6.32511651449993,7.21948802737308,4.08527526904546,22.1475145658512,19.1450851998477,13.7175702420219,17.0246624296583,15.161349496176,17.6067452044269,19.790221692449,16.6616912725234,14.8282449604674,2.20528398054962,11.5420377059036,19.6986600569005,12.0625849856312,8.35606408021955,9.02774948597837,6.41257840585672,15.0194494628513,30.2441459012199,32.4027382702259,26.8532064686082,21.8507410125442,20.0940514749907,24.936820879511,75.8103797772595,81.1718423477216,74.9043858019977,5.72802370809068,29.4192474030456,25.0082944566024,20.8450307786076,17.1452402731864,12.6650286972783,12.5423842137883,15.2082358534618,7.32916637555283,3.75883422546199,11.8054469486516,0.56369293868419,19.1381178936293,14.2294301793104,17.1117045742762,15.1116993468945,15.3750074196608,17.0167996036343,8.20287624516886,6.92071673209692,1.93267296660805,2.01621004380506,53.4058793861621,32.6387596617164,27.321114605844,26.8936103564036,35.0892323508264,41.5244031492844,37.5009802502303,36.0362446305968,40.4875464292072,33.0737540882699,43.2544334237046,54.4789553335216,49.4528866031293,48.1532836988064,7.02864189207155,20.2007217570399,31.5792775265354,18.4673078000486,10.6254276717705,13.5131382324851,15.5678880627175,11.7902608493486,3.51100472824754,5.0827665835536,5.06357760157895,6.87474616127276,6.35856774671644,2.05524755931193,3.7769694869485,5.40018000185445,5.40385443869065,4.53142408984205,4.65984280576638,32.7968018365998,31.5229649986815,21.1709671135126,25.5262052921709,21.5901557506822,22.9804385562518,24.6693867859793,26.7845574410562,29.2036480728552,22.9954462705056,24.8409713892435,23.9555453560317,20.4138486284344,25.2899351999234,24.6398161819581,21.9095097990214,27.1169322710962,25.6569263216728,20.6042950401653,22.6686337006972,29.8296249575311,25.2015644746259,22.4130018550482,24.8542372441282,22.6803606800947,23.3536317781027,27.8050518766614,27.8853894124113,25.2595651753303,30.3016826695179,24.4388137335799,23.8380847348864,26.1907867628601,21.5362209248493,21.9913536518501,27.728974151112,17.0770074165148,18.0491685400571,26.0152131613627,26.9121531325809,16.9263520002908
|short_description=p1@Arhgef2
|short_description=p1@Arhgef2
}}
}}

Latest revision as of 20:03, 25 September 2015

Short description:p1@Arhgef2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef2_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 38bp_to_ENSMUST00000029694, NM_008487, uc008pvw.2, uc008pvx.2_5end
EntrezGene:Arhgef2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E956.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E794.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2136.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E649.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F157.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E454.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E854.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A266.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A465.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A662.81
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H250.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I937.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.86
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G890.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H176.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H372.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9134.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2125.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4100.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A238.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.09
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.31
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C768.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E787.02
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D278.86
Mouse Microglia, donor1.CNhs12629.11718-123C836.55
Mouse Microglia, donor2.CNhs12634.11736-123E826.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D548.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F547.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D238.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D651.48
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D917.42
Mouse Schwann, donor2.CNhs12573.11746-123F927.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.02
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G322.24
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H953.34
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C520.47
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.34
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H114.89
bone (os femoris), adult.CNhs10483.56-12G248.65
bone (os femoris), neonate N02.CNhs11227.1985-43F525.24
bone (os femoris), neonate N16.CNhs11225.1525-43A631.36
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C775.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D159.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D454.77
corpora quadrigemina, adult.CNhs10501.16-22A49.29
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F119.10
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F212.26
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.00
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C622.51
eyeball, embryo E14.CNhs10521.399-16E216.55
eyeball, embryo E15.CNhs10593.426-16C923.05
eyeball, embryo E17.CNhs11023.1261-18D421.10
eyeball, neonate N00.CNhs11207.633-15C620.89
eyeball, neonate N01.CNhs11140.1532-43E722.42
eyeball, neonate N02.CNhs11205.1551-44G818.74
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E229.10
forelimb, embryo E12.CNhs10600.359-14H231.96
forelimb, embryo E13.CNhs10589.384-1E223.93
forelimb, embryo E14.CNhs10577.413-26A824.11
forelimb, embryo E15.CNhs11007.437-20E720.02
forelimb, embryo E17.CNhs10598.1517-43C424.73
forelimb, embryo E18.CNhs11008.1520-43B520.17
gonad, embryo E13.CNhs11044.1564-45I622.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C846.35
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D265.11
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D550.58
heart, embryo E11.CNhs10586.331-24E931.48
heart, embryo E12.CNhs11015.353-12F527.21
heart, embryo E13.CNhs11013.376-3I923.05
heart, embryo E14.CNhs10597.403-26D431.49
heart, embryo E15.CNhs11017.431-16C832.86
heart, embryo E16.CNhs11021.457-17C625.45
heart, embryo E17.CNhs11025.479-18E526.97
heart, embryo E18.CNhs11030.1283-20G322.53
heart, neonate N00.CNhs11213.639-21E327.44
heart, neonate N03.CNhs11221.1349-25I223.37
heart, neonate N10.CNhs11118.749-24G128.73
heart, neonate N16.CNhs11209.782-15G124.81
heart, neonate N20.CNhs11127.821-26I623.98
heart, neonate N25.CNhs11196.1351-25D321.52
heart, neonate N30.CNhs11202.1390-42D227.51
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G119.65
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I526.02
intestine, embryo E13.CNhs11010.381-16D526.24
intestine, embryo E15.CNhs10602.976-16D817.53
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I919.92
kidney, embryo E15.CNhs10997.434-16F828.33
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C725.80
kidney, neonate N00.CNhs11214.646-21G725.60
kidney, neonate N10.CNhs11206.758-6D524.28
kidney, neonate N20.CNhs11113.832-19I114.47
kidney, neonate N25.CNhs11122.1353-25F314.60
kidney, neonate N30.CNhs11203.1385-42H113.33
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F811.35
liver, embryo E13.CNhs10524.378-3H614.55
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G421.00
liver, neonate N00.CNhs11117.641-24F411.19
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B129.56
lung, embryo E12.CNhs10522.354-16G227.10
lung, embryo E14.CNhs10604.404-26F829.66
lung, embryo E15.CNhs11020.432-17C537.85
lung, embryo E16.CNhs10998.458-17B635.91
lung, embryo E17.CNhs10605.480-44A643.55
lung, embryo E18.CNhs10583.1287-20I637.61
lung, neonate N00.CNhs11224.640-42C642.15
lung, neonate N06.CNhs11212.683-20E545.71
lung, neonate N07.CNhs11111.715-19A340.97
lung, neonate N10.CNhs11219.750-23E648.47
lung, neonate N20.CNhs11109.822-18A434.25
lung, neonate N25.CNhs11119.1359-25C727.97
lung, neonate N30.CNhs11133.1394-42H230.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A189.74
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A321.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.11
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.98
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D954.35
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D445.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D644.27
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I714.76
ovary, embryo E18.CNhs11040.505-44H720.66
ovary, neonate N00.CNhs11217.1299-22I420.85
oviduct, adult pregnant day01.CNhs10500.988-6G623.26
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G319.79
pancreas, embryo E18.CNhs10580.1535-43I718.45
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E622.15
pituitary gland, embryo E13.CNhs11009.370-44C719.15
pituitary gland, embryo E14.CNhs11037.398-44A513.72
pituitary gland, embryo E15.CNhs10592.427-16B917.02
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F517.61
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G419.70
skin, neonate N03.CNhs11215.662-22H312.06
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G230.24
spleen, embryo E16.CNhs11035.461-43C132.40
spleen, embryo E18.CNhs11011.1271-21F226.85
spleen, neonate N10.CNhs11116.752-24D121.85
spleen, neonate N20.CNhs11112.824-19H120.09
spleen, neonate N25.CNhs11099.1354-25G324.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C675.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C981.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D374.90
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E329.42
stomach, embryo E15.CNhs10603.1252-16G825.01
stomach, embryo E16.CNhs11022.459-17D420.85
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B812.54
stomach, neonate N07.CNhs11210.718-18A915.21
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F519.14
testis, embryo E15.CNhs11034.443-27C514.23
testis, embryo E16.CNhs11033.470-26G517.11
testis, embryo E17.CNhs11029.486-18I515.11
testis, embryo E18.CNhs11027.503-18G515.38
testis, neonate N00.CNhs11189.1300-22B717.02
testis, neonate N07.CNhs11222.726-26I48.20
testis, neonate N10.CNhs11204.763-44D96.92
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B553.41
thymus, embryo E14.CNhs11041.402-44I432.64
thymus, embryo E15.CNhs11005.430-45I227.32
thymus, embryo E16.CNhs11002.456-26C526.89
thymus, embryo E17.CNhs10581.478-18C135.09
thymus, embryo E18.CNhs10595.1273-19G441.52
thymus, neonate N02.CNhs11181.1541-43F837.50
thymus, neonate N03.CNhs11137.2104-43C736.04
thymus, neonate N06.CNhs11197.681-26C440.49
thymus, neonate N07.CNhs11211.713-19D333.07
thymus, neonate N10.CNhs11194.748-24E443.25
thymus, neonate N20.CNhs11186.820-7A254.48
thymus, neonate N25.CNhs11125.1362-25G749.45
thymus, neonate N30.CNhs11132.1393-42G248.15
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.47
urinary bladder, adult.CNhs10481.879-12E410.63
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E515.57
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I832.80
whole body, embryo E12.CNhs10587.857-27C931.52
whole body, embryo E13.CNhs10512.372-23H221.17
whole body, embryo E14.5.CNhs10578.420-27D225.53
whole body, embryo E14.CNhs10519.395-14B121.59
whole body, embryo E16.CNhs10514.453-14F222.98
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.54
whole body, embryo E17.5.CNhs10513.490-9F921.99
whole body, embryo E17.CNhs10517.475-3I527.73
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C218.05
whole body, neonate N01.CNhs10576.659-23C626.02
whole body, neonate N06.CNhs10515.692-21D126.91
whole body, neonate N10.CNhs10518.761-6B416.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system9.68e-1545
blood island9.68e-1545
hemolymphoid system4.26e-1448
immune system4.26e-1448
respiratory tract6.13e-1341
respiratory system2.35e-1242
lateral plate mesoderm2.38e-1287
hemopoietic organ1.03e-0929
immune organ1.03e-0929
thymus1.85e-0923
neck1.85e-0923
respiratory system epithelium1.85e-0923
hemolymphoid system gland1.85e-0923
pharyngeal epithelium1.85e-0923
thymic region1.85e-0923
pharyngeal gland1.85e-0923
entire pharyngeal arch endoderm1.85e-0923
thymus primordium1.85e-0923
early pharyngeal endoderm1.85e-0923
gland of gut8.77e-0924
pharynx1.60e-0824
upper respiratory tract1.60e-0824
chordate pharynx1.60e-0824
pharyngeal arch system1.60e-0824
pharyngeal region of foregut1.60e-0824
segment of respiratory tract2.70e-0827
mixed endoderm/mesoderm-derived structure2.60e-0735
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