FFCP PHASE1:Mm9::chr14:24823709..24823752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16531 | |EntrezGene=16531 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q08460,C3VLD3 | |UniProt=Q08460,C3VLD3 | ||
|association_with_transcript=-282bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375, | |association_with_transcript=-282bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_00125337 | ||
|cluster_id=chr14:24823709..24823752,- | |||
|description=CAGE_peak_5_at_Kcnma1_5end | |description=CAGE_peak_5_at_Kcnma1_5end | ||
|id=chr14:24823709..24823752,- | |id=chr14:24823709..24823752,- | ||
|ontology_enrichment_celltype=CL:0000117!8.60e-10!23;CL:0000337!8.60e-10!23;CL:0000540!6.06e-09!33;CL:0000047!6.06e-09!33;CL:0000031!6.06e-09!33;CL:0000404!6.06e-09!33 | |ontology_enrichment_celltype=CL:0000117!8.60e-10!23;CL:0000337!8.60e-10!23;CL:0000540!6.06e-09!33;CL:0000047!6.06e-09!33;CL:0000031!6.06e-09!33;CL:0000404!6.06e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.88e-12,23;CL:0000337,2.88e-12,23;CL:0000540,3.02e-07,33;CL:0000047,3.02e-07,33;CL:0000031,3.02e-07,33;CL:0000404,3.02e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.46e-19!71;UBERON:0003075!2.46e-19!71;UBERON:0007284!2.46e-19!71;UBERON:0001017!1.37e-16!73;UBERON:0005743!1.37e-16!73;UBERON:0004121!2.99e-16!102;UBERON:0000924!2.99e-16!102;UBERON:0006601!2.99e-16!102;UBERON:0000073!8.43e-16!75;UBERON:0001016!8.43e-16!75;UBERON:0001049!9.46e-16!52;UBERON:0005068!9.46e-16!52;UBERON:0006241!9.46e-16!52;UBERON:0007135!9.46e-16!52;UBERON:0000033!1.13e-15!63;UBERON:0002020!4.12e-15!34;UBERON:0000955!1.31e-14!50;UBERON:0006238!1.31e-14!50;UBERON:0002616!5.82e-14!49;UBERON:0003056!8.73e-13!49;UBERON:0002791!7.12e-12!29;UBERON:0003528!7.12e-12!29;UBERON:0001893!7.12e-12!29;UBERON:0003080!1.62e-11!40;UBERON:0002780!6.00e-11!39;UBERON:0001890!6.00e-11!39;UBERON:0006240!6.00e-11!39;UBERON:0002021!9.45e-09!10;UBERON:0000411!9.45e-09!10;UBERON:0001950!9.45e-09!10;UBERON:0000956!1.46e-07!21;UBERON:0001869!1.46e-07!21;UBERON:0000203!1.46e-07!21;UBERON:0000153!3.32e-07!94;UBERON:0002619!4.36e-07!17;UBERON:0007811!6.81e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-31,54;UBERON:0001049,8.96e-29,52;UBERON:0005068,8.96e-29,52;UBERON:0006241,8.96e-29,52;UBERON:0007135,8.96e-29,52;UBERON:0002346,8.18e-27,64;UBERON:0003075,8.18e-27,64;UBERON:0007284,8.18e-27,64;UBERON:0001017,4.43e-26,73;UBERON:0001016,4.75e-25,75;UBERON:0002020,6.06e-25,34;UBERON:0000955,6.46e-23,47;UBERON:0006238,6.46e-23,47;UBERON:0010371,4.85e-22,73;UBERON:0002616,1.09e-21,46;UBERON:0004121,2.15e-21,95;UBERON:0000924,2.15e-21,95;UBERON:0006601,2.15e-21,95;UBERON:0003056,3.20e-19,49;UBERON:0003080,3.70e-19,40;UBERON:0003528,1.02e-18,29;UBERON:0002791,1.02e-18,29;UBERON:0001893,1.02e-18,29;UBERON:0010314,3.33e-18,92;UBERON:0002780,4.61e-18,39;UBERON:0001890,4.61e-18,39;UBERON:0006240,4.61e-18,39;UBERON:0002021,6.66e-16,10;UBERON:0000411,6.66e-16,10;UBERON:0001950,6.66e-16,10;UBERON:0002619,1.13e-11,17;UBERON:0000956,1.45e-10,21;UBERON:0001869,1.45e-10,21;UBERON:0000203,1.45e-10,21;UBERON:0003076,2.78e-10,12;UBERON:0003057,2.78e-10,12;UBERON:0002420,3.57e-10,8;UBERON:0007245,3.57e-10,8;UBERON:0010009,3.57e-10,8;UBERON:0010011,3.57e-10,8;UBERON:0000454,3.57e-10,8;UBERON:0002240,6.74e-09,6;UBERON:0005174,6.74e-09,6;UBERON:0001137,6.74e-09,6;UBERON:0001948,6.61e-08,5;UBERON:0002315,6.61e-08,5;UBERON:0000025,1.77e-07,114;UBERON:0004111,6.63e-07,122;UBERON:0000369,9.45e-07,5;UBERON:0002435,9.45e-07,5;UBERON:0000204,9.45e-07,5;UBERON:0010082,9.45e-07,5 | |||
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| 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| ||
|short_description=p5@Kcnma1 | |short_description=p5@Kcnma1 | ||
}} | }} |
Latest revision as of 19:33, 25 September 2015
Short description: | p5@Kcnma1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kcnma1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -282bp_to_NM_001253358, NM_001253359, NM_001253360, NM_001253361, NM_001253362, NM_001253363, NM_001253364, NM_001253365, NM_001253366, NM_001253367, NM_001253368, NM_001253369, NM_001253370, NM_001253371, NM_001253372, NM_001253373, NM_001253374, NM_001253375, NM_00125337 |
EntrezGene: | Kcnma1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.88e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.88e-12 | 23 |
neuron | 3.02e-07 | 33 |
neuronal stem cell | 3.02e-07 | 33 |
neuroblast | 3.02e-07 | 33 |
electrically signaling cell | 3.02e-07 | 33 |